RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 FASTKD5Q7L8L6 764 aaKnown RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 KIAA0825Q8IV33 1275 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 TRMT44Q8IYL2 757 aaKnown RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 USP38Q8NB14 1042 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 COA7Q96BR5 231 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 FAM89AQ96GI7 184 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 TEPSINQ96N21 525 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 PARK7Q99497 189 aaKnown RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 ISCA1Q9BUE6 129 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 BSDC1Q9NW68 430 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 BABAM1Q9NWV8 329 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 PRKAG2Q9UGJ0 569 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 GJD2Q9UKL4 321 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 MINPP1Q9UNW1 487 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 KCNH4Q9UQ05 1017 aa3.14□□□□□ -1.91
CPNE3-211ENST00000621526 COL2A1P02458 1487 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 COL3A1P02461 1466 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-211ENST00000621526 LAMA2P24043 3122 aaKnown RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 SCN11AQ9UI33 1791 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 TNPO2O14787 897 aaKnown RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 ECM2O94769 699 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 HMGCRP04035 888 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 U2AF1L5P0DN76 240 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 ELNP15502 786 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 POU3F3P20264 500 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 CCT4P50991 539 aaKnown RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 GTF2IP78347 998 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 U2AF1Q01081 240 aaKnown RBP eCLIP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 NHLH1Q02575 133 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 MOGSQ13724 837 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 LRRC26Q2I0M4 334 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 PROSER3Q2NL68 480 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 CFAP100Q494V2 611 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 CCDC152Q4G0S7 254 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 MAP3K21Q5TCX8 1036 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 C1orf53Q5VUE5 145 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 FKBP1CQ5VVH2 108 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 LHX8Q68G74 356 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 GPAT2Q6NUI2 795 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 C15orf52Q6ZUT6 534 aaKnown RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 MCM10Q7L590 875 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 RIC3Q7Z5B4 369 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 FAM83AQ86UY5 434 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 ANKRD18AQ8IVF6 992 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 ZBTB38Q8NAP3 1195 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 PLBD2Q8NHP8 589 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 HERVK_113Q902F9 699 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 GAS2L1Q99501 681 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 MXD3Q9BW11 206 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 ANKRD2Q9GZV1 360 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 ZNF576Q9H609 170 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 CD209Q9NNX6 404 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 SEC31BQ9NQW1 1179 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 MIS18AQ9NYP9 233 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 ZNF70Q9UC06 446 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-211ENST00000621526 ZNF112Q9UJU3 913 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 SERPINA10Q9UK55 444 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 PFASO15067 1338 aa3.13□□□□□ -1.91
CPNE3-211ENST00000621526 MED23Q9ULK4 1368 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 KDM3BQ7LBC6 1761 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 MUC6Q6W4X9 2439 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 U2SURPO15042 1029 aaKnown RBP3.12□□□□□ -1.91
CPNE3-211ENST00000621526 ERC2O15083 957 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 TLL1O43897 1013 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 PDE8AO60658 829 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 IL1R1P14778 569 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 HDLBPQ00341 1268 aaKnown RBP3.12□□□□□ -1.91
CPNE3-211ENST00000621526 SPDYE2Q495Y8 402 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 C9orf50Q5SZB4 431 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 DCAF15Q66K64 600 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 POTEEQ6S8J3 1075 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 ERMP1Q7Z2K6 904 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 CERS5Q8N5B7 392 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 XAGE3Q8WTP9 111 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 ZKSCAN4Q969J2 545 aaPredicted RBP3.12□□□□□ -1.91
CPNE3-211ENST00000621526 CDC5LQ99459 802 aaKnown RBP3.12□□□□□ -1.91
CPNE3-211ENST00000621526 THUMPD2Q9BTF0 503 aaKnown RBP3.12□□□□□ -1.91
CPNE3-211ENST00000621526 RSPH6AQ9H0K4 717 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 VEZTQ9HBM0 779 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 C11orf16Q9NQ32 467 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 TIMELESSQ9UNS1 1208 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 COG5Q9UP83 839 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 NUDCQ9Y266 331 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 SNCAIPQ9Y6H5 919 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 CHD8Q9HCK8 2581 aa3.12□□□□□ -1.91
CPNE3-211ENST00000621526 SCN7AQ01118 1682 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 EYSQ5T1H1 3165 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 POLR2AP24928 1970 aaKnown RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 CLRN2A0PK11 232 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 PER1O15534 1290 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 MSCO60682 206 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 PCCAP05165 728 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 CYP2C8P10632 490 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 ALADP13716 330 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 EIF2S2P20042 333 aaKnown RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 PRKAR2BP31323 418 aa3.11□□□□□ -1.91
CPNE3-211ENST00000621526 GCLCP48506 637 aaPredicted RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 AIMP1Q12904 312 aaKnown RBP3.11□□□□□ -1.91
CPNE3-211ENST00000621526 DCTN1Q14203 1278 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms