RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, human

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FMR1-219	ENST00000621453	NRXN2	Q9P2S2	1712 aa		32.92	■■■□□ 2.86
FMR1-219	ENST00000621453	HOXA10	P31260	410 aa	Predicted RBP	32.91	■■■□□ 2.86
FMR1-219	ENST00000621453	TXNRD3	Q86VQ6	643 aa		32.91	■■■□□ 2.86
FMR1-219	ENST00000621453	IFNL3	Q8IZI9	196 aa		32.91	■■■□□ 2.86
FMR1-219	ENST00000621453	LCORL	Q8N3X6	602 aa		32.91	■■■□□ 2.86
FMR1-219	ENST00000621453	GTF3C6	Q969F1	213 aa		32.91	■■■□□ 2.86
FMR1-219	ENST00000621453	STX6	O43752	255 aa		32.91	■■■□□ 2.86
FMR1-219	ENST00000621453	SLC51A	Q86UW1	340 aa		32.91	■■■□□ 2.86
FMR1-219	ENST00000621453	FBXL16	Q8N461	479 aa		32.91	■■■□□ 2.86
FMR1-219	ENST00000621453	MB21D2	Q8IYB1	491 aa	Predicted RBP	32.9	■■■□□ 2.86
FMR1-219	ENST00000621453	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	32.9	■■■□□ 2.86
FMR1-219	ENST00000621453	ANKRD31	Q8N7Z5	1873 aa		32.9	■■■□□ 2.86
FMR1-219	ENST00000621453	SKOR2	Q2VWA4	1001 aa	Predicted RBP	32.89	■■■□□ 2.86
FMR1-219	ENST00000621453	CHST3	Q7LGC8	479 aa		32.89	■■■□□ 2.86
FMR1-219	ENST00000621453	RALYL	Q86SE5	291 aa	Known RBP	32.89	■■■□□ 2.86
FMR1-219	ENST00000621453	MIGA1	Q8NAN2	632 aa		32.89	■■■□□ 2.86
FMR1-219	ENST00000621453	NBPF3	Q9H094	633 aa		32.89	■■■□□ 2.86
FMR1-219	ENST00000621453	NAPB	Q9H115	298 aa		32.89	■■■□□ 2.86
FMR1-219	ENST00000621453	BBOX1	O75936	387 aa		32.88	■■■□□ 2.85
FMR1-219	ENST00000621453	GSG1L2	A8MUP6	293 aa		32.88	■■■□□ 2.85
FMR1-219	ENST00000621453	MCM5	P33992	734 aa		32.88	■■■□□ 2.85
FMR1-219	ENST00000621453	ADGRA1	Q86SQ6	560 aa		32.88	■■■□□ 2.85
FMR1-219	ENST00000621453	CRAMP1	Q96RY5	1269 aa		32.88	■■■□□ 2.85
FMR1-219	ENST00000621453	SLC4A4	Q9Y6R1	1079 aa		32.88	■■■□□ 2.85
FMR1-219	ENST00000621453	APOBR	Q0VD83	1088 aa		32.87	■■■□□ 2.85
FMR1-219	ENST00000621453	CHD4	Q14839	1912 aa		32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	ZSCAN22	P10073	491 aa	Predicted RBP	32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	TRDN	Q13061	729 aa		32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	TBC1D10C	Q8IV04	446 aa		32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	PFKFB2	O60825	505 aa		32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	DTNB	O60941	627 aa		32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	GPSM2	P81274	684 aa		32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	NAA16	Q6N069	864 aa	Predicted RBP	32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	C15orf52	Q6ZUT6	534 aa	Known RBP	32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	NACAP1	Q9BZK3	213 aa		32.86	■■■□□ 2.85
FMR1-219	ENST00000621453	MAGEB6P1	A0A0J9YX57	407 aa		32.85	■■■□□ 2.85
FMR1-219	ENST00000621453	PRC1	O43663	620 aa		32.85	■■■□□ 2.85
FMR1-219	ENST00000621453	PRKAB2	O43741	272 aa		32.85	■■■□□ 2.85
FMR1-219	ENST00000621453	CHAF1A	Q13111	956 aa	Predicted RBP	32.85	■■■□□ 2.85
FMR1-219	ENST00000621453	BRIP1	Q9BX63	1249 aa		32.85	■■■□□ 2.85
FMR1-219	ENST00000621453	CCDC88A	Q3V6T2	1871 aa		32.85	■■■□□ 2.85
FMR1-219	ENST00000621453	WDR19	Q8NEZ3	1342 aa		32.85	■■■□□ 2.85
FMR1-219	ENST00000621453	PDIA4	P13667	645 aa	Known RBP	32.84	■■■□□ 2.85
FMR1-219	ENST00000621453	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.84	■■■□□ 2.85
FMR1-219	ENST00000621453	MAST2	Q6P0Q8	1798 aa		32.84	■■■□□ 2.85
FMR1-219	ENST00000621453	ATP2B4	P23634	1241 aa		32.84	■■■□□ 2.85
FMR1-219	ENST00000621453	SCRN1	Q12765	414 aa		32.84	■■■□□ 2.85
FMR1-219	ENST00000621453	ZNF384	Q8TF68	577 aa		32.83	■■■□□ 2.85
FMR1-219	ENST00000621453	NSUN4	Q96CB9	384 aa	Known RBP	32.83	■■■□□ 2.85
FMR1-219	ENST00000621453	ZNF274	Q96GC6	653 aa	Predicted RBP	32.83	■■■□□ 2.85
FMR1-219	ENST00000621453	LMBRD1	Q9NUN5	540 aa		32.83	■■■□□ 2.85
FMR1-219	ENST00000621453	TDO2	P48775	406 aa		32.82	■■■□□ 2.85
FMR1-219	ENST00000621453	ANTXR2	P58335	489 aa		32.82	■■■□□ 2.85
FMR1-219	ENST00000621453	ZNF804A	Q7Z570	1209 aa		32.82	■■■□□ 2.85
FMR1-219	ENST00000621453	CHAMP1	Q96JM3	812 aa		32.82	■■■□□ 2.85
FMR1-219	ENST00000621453	RIOK1	Q9BRS2	568 aa	Known RBP	32.82	■■■□□ 2.85
FMR1-219	ENST00000621453	TIAM2	Q8IVF5	1701 aa		32.82	■■■□□ 2.84
FMR1-219	ENST00000621453	PDC	P20941	246 aa		32.82	■■■□□ 2.84
FMR1-219	ENST00000621453	EVC	P57679	992 aa		32.82	■■■□□ 2.84
FMR1-219	ENST00000621453	MTMR6	Q9Y217	621 aa		32.82	■■■□□ 2.84
FMR1-219	ENST00000621453	LRRC37A	A6NMS7	1700 aa		32.82	■■■□□ 2.84
FMR1-219	ENST00000621453	F13A1	P00488	732 aa		32.81	■■■□□ 2.84
FMR1-219	ENST00000621453	LARP1B	Q659C4	914 aa	Known RBP	32.81	■■■□□ 2.84
FMR1-219	ENST00000621453	GGA1	Q9UJY5	639 aa		32.81	■■■□□ 2.84
FMR1-219	ENST00000621453	PARP3	Q9Y6F1	533 aa		32.81	■■■□□ 2.84
FMR1-219	ENST00000621453	UFL1	O94874	794 aa		32.8	■■■□□ 2.84
FMR1-219	ENST00000621453	MMP10	P09238	476 aa		32.8	■■■□□ 2.84
FMR1-219	ENST00000621453	MECOM	Q03112	1051 aa		32.8	■■■□□ 2.84
FMR1-219	ENST00000621453	TMC4	Q7Z404	712 aa		32.8	■■■□□ 2.84
FMR1-219	ENST00000621453	TDRD7	Q8NHU6	1098 aa	Known RBP	32.8	■■■□□ 2.84
FMR1-219	ENST00000621453	LLPH	Q9BRT6	129 aa	Known RBP	32.8	■■■□□ 2.84
FMR1-219	ENST00000621453	PODXL2	Q9NZ53	605 aa		32.8	■■■□□ 2.84
FMR1-219	ENST00000621453	TMED8	Q6PL24	325 aa	Predicted RBP	32.8	■■■□□ 2.84
FMR1-219	ENST00000621453	PRDX5	P30044	214 aa		32.79	■■■□□ 2.84
FMR1-219	ENST00000621453	PDIA3	P30101	505 aa	Known RBP	32.79	■■■□□ 2.84
FMR1-219	ENST00000621453	SPTY2D1	Q68D10	685 aa	Predicted RBP	32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	GPR101	Q96P66	508 aa	Predicted RBP	32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	GPHN	Q9NQX3	736 aa	Predicted RBP	32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	SALL1	Q9NSC2	1324 aa		32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	PRPF40A	O75400	957 aa	Known RBP	32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	WDR66	Q8TBY9	1149 aa		32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	GZF1	Q9H116	711 aa	Predicted RBP	32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	NAP1L2	Q9ULW6	460 aa	Predicted RBP	32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	DDX49	Q9Y6V7	483 aa	Known RBP	32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	NEDD4	P46934	1319 aa		32.78	■■■□□ 2.84
FMR1-219	ENST00000621453	TCHH	Q07283	1943 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	PPEF1	O14829	653 aa	Predicted RBP	32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	JAK2	O60674	1132 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	CTDSPL2	Q05D32	466 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	KLHL40	Q2TBA0	621 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	SMARCC2	Q8TAQ2	1214 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	SDR42E1	Q8WUS8	393 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	CHMP4C	Q96CF2	233 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	JAG2	Q9Y219	1238 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	ATP6V1D	Q9Y5K8	247 aa		32.77	■■■□□ 2.84
FMR1-219	ENST00000621453	VPS37C	A5D8V6	355 aa	Predicted RBP	32.76	■■■□□ 2.84
FMR1-219	ENST00000621453	IGSF3	O75054	1194 aa		32.76	■■■□□ 2.84
FMR1-219	ENST00000621453	SRGN	P10124	158 aa		32.76	■■■□□ 2.84
FMR1-219	ENST00000621453	DYNLL1	P63167	89 aa	Known RBP	32.76	■■■□□ 2.84
FMR1-219	ENST00000621453	EZH2	Q15910	746 aa	Known RBP	32.76	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms