RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 NLGN2Q8NFZ4 835 aa19.05■□□□□ 0.64
CBWD3-216ENST00000621396 DAXXQ9UER7 740 aaPredicted RBP19.04■□□□□ 0.64
CBWD3-216ENST00000621396 F8W031 263 aaPredicted RBP19.04■□□□□ 0.64
CBWD3-216ENST00000621396 FGAP02671 866 aa19.04■□□□□ 0.64
CBWD3-216ENST00000621396 MFSD14BQ5SR56 506 aa19.04■□□□□ 0.64
CBWD3-216ENST00000621396 TCEANC2Q96MN5 208 aa19.04■□□□□ 0.64
CBWD3-216ENST00000621396 STRBPQ96SI9 672 aaKnown RBP19.04■□□□□ 0.64
CBWD3-216ENST00000621396 PIM2Q9P1W9 311 aa19.04■□□□□ 0.64
CBWD3-216ENST00000621396 RABEP1Q15276 862 aa19.03■□□□□ 0.64
CBWD3-216ENST00000621396 JAKMIP1Q96N16 626 aaKnown RBP19.03■□□□□ 0.64
CBWD3-216ENST00000621396 MYH7P12883 1935 aa19.03■□□□□ 0.64
CBWD3-216ENST00000621396 CASTP20810 708 aaKnown RBP19.03■□□□□ 0.64
CBWD3-216ENST00000621396 DZIP1Q86YF9 867 aaKnown RBP19.03■□□□□ 0.64
CBWD3-216ENST00000621396 SDR42E1Q8WUS8 393 aa19.03■□□□□ 0.64
CBWD3-216ENST00000621396 AATFQ9NY61 560 aaKnown RBP eCLIP19.03■□□□□ 0.64
CBWD3-216ENST00000621396 CHD4Q14839 1912 aa19.02■□□□□ 0.64
CBWD3-216ENST00000621396 LDHBP07195 334 aaKnown RBP19.02■□□□□ 0.64
CBWD3-216ENST00000621396 TGFB2P61812 414 aa19.02■□□□□ 0.64
CBWD3-216ENST00000621396 WDR66Q8TBY9 1149 aa19.02■□□□□ 0.64
CBWD3-216ENST00000621396 DSCC1Q9BVC3 393 aa19.02■□□□□ 0.64
CBWD3-216ENST00000621396 COA1Q9GZY4 146 aa19.02■□□□□ 0.64
CBWD3-216ENST00000621396 ZNF277Q9NRM2 450 aaPredicted RBP19.02■□□□□ 0.64
CBWD3-216ENST00000621396 MYH13Q9UKX3 1938 aa19.02■□□□□ 0.64
CBWD3-216ENST00000621396 ZKSCAN1P17029 563 aaPredicted RBP19.02■□□□□ 0.63
CBWD3-216ENST00000621396 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.63
CBWD3-216ENST00000621396 BCS1LQ9Y276 419 aa19.02■□□□□ 0.63
CBWD3-216ENST00000621396 DOCK2Q92608 1830 aa19.02■□□□□ 0.63
CBWD3-216ENST00000621396 ANAPC15P60006 121 aa19.01■□□□□ 0.63
CBWD3-216ENST00000621396 STK11IPQ8N1F8 1099 aa19.01■□□□□ 0.63
CBWD3-216ENST00000621396 EPB41L2O43491 1005 aaKnown RBP19.01■□□□□ 0.63
CBWD3-216ENST00000621396 CERS5Q8N5B7 392 aa19.01■□□□□ 0.63
CBWD3-216ENST00000621396 EYA3Q99504 573 aa19.01■□□□□ 0.63
CBWD3-216ENST00000621396 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
CBWD3-216ENST00000621396 SMIM22K7EJ46 135 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 PPIP5K2O43314 1243 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 BECN1Q14457 450 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 TICAM2Q86XR7 235 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 HSCBQ8IWL3 235 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 EPB41L4AQ9HCS5 686 aaPredicted RBP19■□□□□ 0.63
CBWD3-216ENST00000621396 SLC4A4Q9Y6R1 1079 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 SNED1Q8TER0 1413 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 MAGEB6P1A0A0J9YX57 407 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 CCDC93Q567U6 631 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 DALRD3Q5D0E6 543 aaKnown RBP19■□□□□ 0.63
CBWD3-216ENST00000621396 STOX1Q6ZVD7 989 aa19■□□□□ 0.63
CBWD3-216ENST00000621396 RIOK1Q9BRS2 568 aaKnown RBP19■□□□□ 0.63
CBWD3-216ENST00000621396 PDS5AQ29RF7 1337 aaKnown RBP18.99■□□□□ 0.63
CBWD3-216ENST00000621396 ECE2O60344 883 aa18.99■□□□□ 0.63
CBWD3-216ENST00000621396 SLC4A8Q2Y0W8 1093 aa18.99■□□□□ 0.63
CBWD3-216ENST00000621396 RTFDC1Q9BY42 306 aaPredicted RBP18.99■□□□□ 0.63
CBWD3-216ENST00000621396 SLKQ9H2G2 1235 aaPredicted RBP18.99■□□□□ 0.63
CBWD3-216ENST00000621396 INCENPQ9NQS7 918 aa18.99■□□□□ 0.63
CBWD3-216ENST00000621396 GSG1L2A8MUP6 293 aa18.99■□□□□ 0.63
CBWD3-216ENST00000621396 RNF20Q5VTR2 975 aa18.99■□□□□ 0.63
CBWD3-216ENST00000621396 SPON1Q9HCB6 807 aa18.98■□□□□ 0.63
CBWD3-216ENST00000621396 DTNBO60941 627 aa18.98■□□□□ 0.63
CBWD3-216ENST00000621396 CHST3Q7LGC8 479 aa18.98■□□□□ 0.63
CBWD3-216ENST00000621396 IFNL3Q8IZI9 196 aa18.98■□□□□ 0.63
CBWD3-216ENST00000621396 KCNB2Q92953 911 aa18.98■□□□□ 0.63
CBWD3-216ENST00000621396 SALL1Q9NSC2 1324 aa18.97■□□□□ 0.63
CBWD3-216ENST00000621396 SCNN1DP51172 638 aa18.97■□□□□ 0.63
CBWD3-216ENST00000621396 EVX2Q03828 476 aa18.97■□□□□ 0.63
CBWD3-216ENST00000621396 ZGPATQ8N5A5 531 aaKnown RBP18.97■□□□□ 0.63
CBWD3-216ENST00000621396 LRRC2Q9BYS8 371 aa18.97■□□□□ 0.63
CBWD3-216ENST00000621396 CD2APQ9Y5K6 639 aa18.97■□□□□ 0.63
CBWD3-216ENST00000621396 KIF13BQ9NQT8 1826 aa18.96■□□□□ 0.63
CBWD3-216ENST00000621396 YDJCA8MPS7 323 aa18.96■□□□□ 0.63
CBWD3-216ENST00000621396 PATL2C9JE40 543 aaKnown RBP18.96■□□□□ 0.63
CBWD3-216ENST00000621396 ST18O60284 1047 aa18.96■□□□□ 0.63
CBWD3-216ENST00000621396 KIAA2012Q0VF49 1180 aa18.96■□□□□ 0.63
CBWD3-216ENST00000621396 SPTY2D1Q68D10 685 aaPredicted RBP18.96■□□□□ 0.63
CBWD3-216ENST00000621396 NKX2-3Q8TAU0 364 aa18.96■□□□□ 0.63
CBWD3-216ENST00000621396 SNX21Q969T3 373 aa18.96■□□□□ 0.63
CBWD3-216ENST00000621396 DLEC1Q9Y238 1755 aa18.96■□□□□ 0.62
CBWD3-216ENST00000621396 CC2D2BQ6DHV5 1058 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 PODNQ7Z5L7 613 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 KIAA0825Q8IV33 1275 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 RTKN2Q8IZC4 609 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 FHDC1Q9C0D6 1143 aaPredicted RBP18.95■□□□□ 0.62
CBWD3-216ENST00000621396 NBPF3Q9H094 633 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 CYP2D7A0A087X1C5 515 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 E7EWF7 191 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 K7ELQ4 463 aaPredicted RBP18.95■□□□□ 0.62
CBWD3-216ENST00000621396 ZNF213O14771 459 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 TDO2P48775 406 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 LARGE2Q8N3Y3 721 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 NAPBQ9H115 298 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 KIAA1551Q9HCM1 1747 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 FAM205AQ6ZU69 1335 aa18.95■□□□□ 0.62
CBWD3-216ENST00000621396 AK2P54819 239 aa18.94■□□□□ 0.62
CBWD3-216ENST00000621396 CTDSPL2Q05D32 466 aa18.94■□□□□ 0.62
CBWD3-216ENST00000621396 IMMTQ16891 758 aaKnown RBP18.94■□□□□ 0.62
CBWD3-216ENST00000621396 RUFY3Q7L099 469 aa18.94■□□□□ 0.62
CBWD3-216ENST00000621396 IL17RAQ96F46 866 aa18.94■□□□□ 0.62
CBWD3-216ENST00000621396 TTF2Q9UNY4 1162 aaKnown RBP18.94■□□□□ 0.62
CBWD3-216ENST00000621396 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
CBWD3-216ENST00000621396 RAD17O75943 681 aa18.94■□□□□ 0.62
CBWD3-216ENST00000621396 SH3RF3Q8TEJ3 882 aaPredicted RBP18.94■□□□□ 0.62
CBWD3-216ENST00000621396 NEK1Q96PY6 1258 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms