RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CCDC122Q5T0U0 273 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-210ENST00000621266 UBXN1Q04323 297 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 LRRC43Q8N309 656 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 ZMYM3Q14202 1370 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 PLCB3Q01970 1234 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
COL4A6-210ENST00000621266 MICU3Q86XE3 530 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.15□□□□□ -0.62
COL4A6-210ENST00000621266 CARD6Q9BX69 1037 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 NUF2Q9BZD4 464 aa11.15□□□□□ -0.62
COL4A6-210ENST00000621266 MTRF1LQ9UGC7 380 aaKnown RBP11.15□□□□□ -0.62
COL4A6-210ENST00000621266 MRPS27Q92552 414 aaKnown RBP11.15□□□□□ -0.63
COL4A6-210ENST00000621266 PTPRCP08575 1304 aa11.15□□□□□ -0.63
COL4A6-210ENST00000621266 HAND2P61296 217 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 SYNCQ9H7C4 482 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 CCDC172P0C7W6 258 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 HSPA1LP34931 641 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 STX17P56962 302 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 RIPOR2Q9Y4F9 1068 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 CFAP65Q6ZU64 1925 aaKnown RBP11.14□□□□□ -0.63
COL4A6-210ENST00000621266 E7EVH7 732 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 STAT6P42226 847 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 MAP7Q14244 749 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 FYB2Q5VWT5 728 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 RTL1A6NKG5 1358 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 F6X3S4 739 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 SLC5A1P13866 664 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL4A6-210ENST00000621266 RNASE9P60153 205 aaKnown RBP11.14□□□□□ -0.63
COL4A6-210ENST00000621266 COG7P83436 770 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 CABS1Q96KC9 395 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 PFDN1O60925 122 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 TNNC1P63316 161 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 TTF1Q15361 905 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-210ENST00000621266 PRR16Q569H4 304 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 TMEM67Q5HYA8 995 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 CATIPQ7Z7H3 387 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 TEX13AQ9BXU3 409 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-210ENST00000621266 PRPHP41219 470 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 SLC39A6Q13433 755 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 MUM1Q2TAK8 710 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 VAT1LQ9HCJ6 419 aa11.14□□□□□ -0.63
COL4A6-210ENST00000621266 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL4A6-210ENST00000621266 CETN3O15182 167 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 VSIG1Q86XK7 387 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 TSC1Q92574 1164 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 LRRC45Q96CN5 670 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 TRIM4Q9C037 500 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 RBSNQ9H1K0 784 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 BIN2Q9UBW5 565 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-210ENST00000621266 RTCBQ9Y3I0 505 aaKnown RBP11.13□□□□□ -0.63
COL4A6-210ENST00000621266 F13A1P00488 732 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 IQCA1Q86XH1 822 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 ZBTB12Q9Y330 459 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-210ENST00000621266 ZNF354CQ86Y25 554 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 NEK11Q8NG66 645 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 BICD1Q96G01 975 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 VEZTQ9HBM0 779 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 ITSN2Q9NZM3 1697 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 GMNNO75496 209 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 VPS52Q8N1B4 723 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 BAG1Q99933 345 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-210ENST00000621266 PYM1Q9BRP8 204 aaKnown RBP11.13□□□□□ -0.63
COL4A6-210ENST00000621266 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-210ENST00000621266 SATB1Q01826 763 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 MIER3Q7Z3K6 550 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 ODF2LQ9ULJ1 636 aa11.13□□□□□ -0.63
COL4A6-210ENST00000621266 OPHN1O60890 802 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 SDCCAG8Q86SQ7 713 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-210ENST00000621266 PPIP5K1Q6PFW1 1433 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 BMP2KLQ5H9B9 411 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 CUL5Q93034 780 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 MAP3K2Q9Y2U5 619 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 IL16Q14005 1332 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 NUP160Q12769 1436 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 GNPATO15228 680 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 TTC22Q5TAA0 569 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 RUFY3Q7L099 469 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 PHLDB2Q86SQ0 1253 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 DHX58Q96C10 678 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 SIRT1Q96EB6 747 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
COL4A6-210ENST00000621266 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 ZMAT2Q96NC0 199 aaKnown RBP11.12□□□□□ -0.63
COL4A6-210ENST00000621266 KCNG4Q8TDN1 519 aa11.12□□□□□ -0.63
COL4A6-210ENST00000621266 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-210ENST00000621266 IL2RBP14784 551 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-210ENST00000621266 ZNF287Q9HBT7 754 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 TXNDC16Q9P2K2 825 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 GOLGA6BA6NDN3 693 aa11.11□□□□□ -0.63
COL4A6-210ENST00000621266 RPSAP08865 295 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms