RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 LRP6O75581 1613 aa12.06□□□□□ -0.48
TP53-225ENST00000619485 CTDNEP1O95476 244 aa12.06□□□□□ -0.48
TP53-225ENST00000619485 POLR3DP05423 398 aaPredicted RBP12.06□□□□□ -0.48
TP53-225ENST00000619485 DHX32Q7L7V1 743 aaKnown RBP12.06□□□□□ -0.48
TP53-225ENST00000619485 DHX40Q8IX18 779 aaKnown RBP12.06□□□□□ -0.48
TP53-225ENST00000619485 CEP57L1Q8IYX8 460 aa12.06□□□□□ -0.48
TP53-225ENST00000619485 ANO10Q9NW15 660 aa12.06□□□□□ -0.48
TP53-225ENST00000619485 TCIRG1Q13488 830 aa12.06□□□□□ -0.48
TP53-225ENST00000619485 SNW1Q13573 536 aaKnown RBP12.06□□□□□ -0.48
TP53-225ENST00000619485 ISM2Q6H9L7 571 aa12.06□□□□□ -0.48
TP53-225ENST00000619485 GREM2Q9H772 168 aa12.06□□□□□ -0.48
TP53-225ENST00000619485 CGNQ9P2M7 1197 aaKnown RBP12.06□□□□□ -0.48
TP53-225ENST00000619485 CTNNA3Q9UI47 895 aa12.06□□□□□ -0.48
TP53-225ENST00000619485 CTAGE5O15320 804 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 PFKFB2O60825 505 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 CAVIN2O95810 425 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 ADD1P35611 737 aaKnown RBP12.05□□□□□ -0.48
TP53-225ENST00000619485 HAND2P61296 217 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 FAM160A1Q05DH4 1040 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 AMIGO3Q86WK7 504 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 HELBQ8NG08 1087 aaPredicted RBP12.05□□□□□ -0.48
TP53-225ENST00000619485 ZNF396Q96N95 335 aaPredicted RBP12.05□□□□□ -0.48
TP53-225ENST00000619485 C8orf37Q96NL8 207 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 FEZ1Q99689 392 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 ELF2Q15723 593 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 MRFAP1L1Q96HT8 127 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 HAUS7Q99871 368 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
TP53-225ENST00000619485 TAF1P21675 1872 aa12.05□□□□□ -0.48
TP53-225ENST00000619485 NUP98P52948 1817 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 CDC25BP30305 580 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 TTLL5Q6EMB2 1281 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 INTS5Q6P9B9 1019 aaKnown RBP12.04□□□□□ -0.48
TP53-225ENST00000619485 NLRP10Q86W26 655 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 SMARCC2Q8TAQ2 1214 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 NAT10Q9H0A0 1025 aaKnown RBP12.04□□□□□ -0.48
TP53-225ENST00000619485 PAG1Q9NWQ8 432 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 MYO5AQ9Y4I1 1855 aaKnown RBP12.04□□□□□ -0.48
TP53-225ENST00000619485 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
TP53-225ENST00000619485 STK38Q15208 465 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 NAA16Q6N069 864 aaPredicted RBP12.04□□□□□ -0.48
TP53-225ENST00000619485 SARM1Q6SZW1 724 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 KBTBD3Q8NAB2 608 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 GJB4Q9NTQ9 266 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 PCDHA7Q9UN72 937 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 MAP3K15Q6ZN16 1313 aa12.04□□□□□ -0.48
TP53-225ENST00000619485 JCADQ9P266 1359 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 E7EWF7 191 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 NDUFA8P51970 172 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 CCZ1BP86790 482 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
TP53-225ENST00000619485 FKBP4Q02790 459 aaKnown RBP eCLIP12.03□□□□□ -0.48
TP53-225ENST00000619485 DDB1Q16531 1140 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 DPCR1Q3MIW9 517 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 GORABQ5T7V8 394 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 TMC6Q7Z403 805 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 CCDC191Q8NCU4 936 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 MRPS27Q92552 414 aaKnown RBP12.03□□□□□ -0.48
TP53-225ENST00000619485 KIF18AQ8NI77 898 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 LLPHQ9BRT6 129 aaKnown RBP12.03□□□□□ -0.48
TP53-225ENST00000619485 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
TP53-225ENST00000619485 A0A1B0GUL7 405 aa12.02□□□□□ -0.48
TP53-225ENST00000619485 NEMFO60524 1076 aa12.02□□□□□ -0.48
TP53-225ENST00000619485 HSPD1P10809 573 aaKnown RBP12.02□□□□□ -0.48
TP53-225ENST00000619485 PDIA3P30101 505 aaKnown RBP12.02□□□□□ -0.48
TP53-225ENST00000619485 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.48
TP53-225ENST00000619485 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.48
TP53-225ENST00000619485 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.48
TP53-225ENST00000619485 CCAR2Q8N163 923 aaKnown RBP12.02□□□□□ -0.48
TP53-225ENST00000619485 IFNKQ9P0W0 207 aa12.02□□□□□ -0.48
TP53-225ENST00000619485 SPATA31A5Q5VU36 1347 aa12.02□□□□□ -0.49
TP53-225ENST00000619485 SPATA31A7Q8IWB4 1347 aa12.02□□□□□ -0.49
TP53-225ENST00000619485 UBAP1LF5GYI3 381 aa12.02□□□□□ -0.49
TP53-225ENST00000619485 EYA2O00167 538 aa12.02□□□□□ -0.49
TP53-225ENST00000619485 RBM6P78332 1123 aaKnown RBP12.02□□□□□ -0.49
TP53-225ENST00000619485 WASHC4Q2M389 1173 aa12.02□□□□□ -0.49
TP53-225ENST00000619485 KIF6Q6ZMV9 814 aa12.02□□□□□ -0.49
TP53-225ENST00000619485 XPO4Q9C0E2 1151 aaKnown RBP12.02□□□□□ -0.49
TP53-225ENST00000619485 SEC31BQ9NQW1 1179 aa12.02□□□□□ -0.49
TP53-225ENST00000619485 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 KIF20AO95235 890 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 CRKLP46109 303 aaKnown RBP12.01□□□□□ -0.49
TP53-225ENST00000619485 GIGYF2Q6Y7W6 1299 aaKnown RBP12.01□□□□□ -0.49
TP53-225ENST00000619485 DZIP3Q86Y13 1208 aaKnown RBP12.01□□□□□ -0.49
TP53-225ENST00000619485 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 DDX41Q9UJV9 622 aaKnown RBP12.01□□□□□ -0.49
TP53-225ENST00000619485 SPEF2Q9C093 1822 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 STARD3NLO95772 234 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 IFIT1P09914 478 aaKnown RBP12.01□□□□□ -0.49
TP53-225ENST00000619485 PTPN21Q16825 1174 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 SUSD4Q5VX71 490 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 FBXO38Q6PIJ6 1188 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 SYT10Q6XYQ8 523 aa12.01□□□□□ -0.49
TP53-225ENST00000619485 NYAP1Q6ZVC0 841 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms