RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 OPHN1O60890 802 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 BANK1Q8NDB2 785 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 RSPH3Q86UC2 560 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 KIFAP3Q92845 792 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 NOX5Q96PH1 765 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 PIK3R4Q99570 1358 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 RBBP5Q15291 538 aaKnown RBP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 SRGAP1Q7Z6B7 1085 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 ELP1O95163 1332 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 OAS2P29728 719 aaKnown RBP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 MTMR3Q13615 1198 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 DHX58Q96C10 678 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 MICAL1Q8TDZ2 1067 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 SLC8A1P32418 973 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 CCT6AP40227 531 aaKnown RBP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 DPH6Q7L8W6 267 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 CADPSQ9ULU8 1353 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 Q6ZUG5 572 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 CRNKL1Q9BZJ0 848 aaKnown RBP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 HMGB2P26583 209 aaKnown RBP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 THUMPD2Q9BTF0 503 aaKnown RBP12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 RIPOR2Q9Y4F9 1068 aa12.89□□□□□ -0.35
PCDHA4-204ENST00000618834 GSTO1P78417 241 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 STK38LQ9Y2H1 464 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 VWA3BQ502W6 1294 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 PCF11O94913 1555 aaKnown RBP12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 TRIM75PA6NK02 468 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 RASA3Q14644 834 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 BRAPQ7Z569 592 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 VSIG1Q86XK7 387 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 HAUS7Q99871 368 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 TSPY3P0CV98 308 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 TSPY8P0CW00 308 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 HHATQ5VTY9 493 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 TXNDC2Q86VQ3 553 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
PCDHA4-204ENST00000618834 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 TMTC2Q8N394 836 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 CALM1P0DP23 149 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 CALM2P0DP24 149 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 CALM3P0DP25 149 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 SPOPO43791 374 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 CALML3P27482 149 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 ATAD2BQ9ULI0 1458 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 PFDN1O60925 122 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 ATP6V1AP38606 617 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 NAPAP54920 295 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 SMARCC2Q8TAQ2 1214 aa12.87□□□□□ -0.35
PCDHA4-204ENST00000618834 GIPC1O14908 333 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 DCAF17Q5H9S7 520 aaPredicted RBP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 PHLDB3Q6NSJ2 640 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 SPATS2Q86XZ4 545 aaKnown RBP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 HGSO14964 777 aaPredicted RBP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 PAK2Q13177 524 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 C6orf50Q9HD87 102 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 MAP3K2Q9Y2U5 619 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 F6X3S4 739 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 KRT5P13647 590 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 GABPB2Q8TAK5 448 aaPredicted RBP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 ESR2Q92731 530 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 CUL4BQ13620 913 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 CACYBPQ9HB71 228 aaKnown RBP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 EPB41P11171 864 aaKnown RBP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 SLC4A8Q2Y0W8 1093 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 SNCBQ16143 134 aa12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 DDX21Q9NR30 783 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCDHA4-204ENST00000618834 SDSP20132 328 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 CA8P35219 290 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 FAN1Q9Y2M0 1017 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 CAPN7Q9Y6W3 813 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 HDAC1Q13547 482 aaPredicted RBP12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 CXorf38Q8TB03 319 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 LRRC2Q9BYS8 371 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 FAM204AQ9H8W3 233 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 DIXDC1Q155Q3 683 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 ZSCAN26Q16670 478 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 DNAJC8O75937 253 aaPredicted RBP12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 RAPGEF1Q13905 1077 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 ZMAT2Q96NC0 199 aaKnown RBP12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 SESN3P58005 492 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 LEO1Q8WVC0 666 aaPredicted RBP12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 NCAPGQ9BPX3 1015 aa12.85□□□□□ -0.35
PCDHA4-204ENST00000618834 CUL7Q14999 1698 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms