RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 GADD45BO75293 160 aaPredicted RBP20.73■□□□□ 0.91
CNOT3-209ENST00000617930 SCRN1Q12765 414 aa20.73■□□□□ 0.91
CNOT3-209ENST00000617930 NLGN1Q8N2Q7 840 aa20.73■□□□□ 0.91
CNOT3-209ENST00000617930 CAVIN1Q6NZI2 390 aaKnown RBP20.73■□□□□ 0.91
CNOT3-209ENST00000617930 COL1A1P02452 1464 aaPredicted RBP20.73■□□□□ 0.91
CNOT3-209ENST00000617930 KLRG2A4D1S0 409 aaPredicted RBP20.72■□□□□ 0.91
CNOT3-209ENST00000617930 HMGB1P09429 215 aaKnown RBP20.72■□□□□ 0.91
CNOT3-209ENST00000617930 GYG1P46976 350 aa20.72■□□□□ 0.91
CNOT3-209ENST00000617930 ST5P78524 1137 aa20.72■□□□□ 0.91
CNOT3-209ENST00000617930 APOBRQ0VD83 1088 aa20.72■□□□□ 0.91
CNOT3-209ENST00000617930 GRAPQ13588 217 aa20.72■□□□□ 0.91
CNOT3-209ENST00000617930 USP48Q86UV5 1035 aa20.72■□□□□ 0.91
CNOT3-209ENST00000617930 FLAD1Q8NFF5 587 aa20.72■□□□□ 0.91
CNOT3-209ENST00000617930 GRAPLQ8TC17 118 aaPredicted RBP20.72■□□□□ 0.91
CNOT3-209ENST00000617930 TRIM44Q96DX7 344 aaPredicted RBP20.72■□□□□ 0.91
CNOT3-209ENST00000617930 IQSEC3Q9UPP2 1182 aaPredicted RBP20.72■□□□□ 0.91
CNOT3-209ENST00000617930 CNPY2Q9Y2B0 182 aa20.72■□□□□ 0.91
CNOT3-209ENST00000617930 NCLP19338 710 aaKnown RBP20.71■□□□□ 0.91
CNOT3-209ENST00000617930 ZSCAN25Q6NSZ9 544 aa20.71■□□□□ 0.91
CNOT3-209ENST00000617930 STRBPQ96SI9 672 aaKnown RBP20.71■□□□□ 0.91
CNOT3-209ENST00000617930 IRS2Q9Y4H2 1338 aa20.71■□□□□ 0.91
CNOT3-209ENST00000617930 MYH7P12883 1935 aa20.71■□□□□ 0.91
CNOT3-209ENST00000617930 ZNF804BA4D1E1 1349 aa20.71■□□□□ 0.91
CNOT3-209ENST00000617930 CDC37L1Q7L3B6 337 aa20.71■□□□□ 0.91
CNOT3-209ENST00000617930 MAGEB6Q8N7X4 407 aa20.71■□□□□ 0.91
CNOT3-209ENST00000617930 TMEM63CQ9P1W3 806 aa20.71■□□□□ 0.91
CNOT3-209ENST00000617930 CTDNEP1O95476 244 aa20.7■□□□□ 0.9
CNOT3-209ENST00000617930 ANTXR2P58335 489 aa20.7■□□□□ 0.9
CNOT3-209ENST00000617930 LARP1BQ659C4 914 aaKnown RBP20.7■□□□□ 0.9
CNOT3-209ENST00000617930 TXNRD3Q86VQ6 643 aa20.7■□□□□ 0.9
CNOT3-209ENST00000617930 CTNNA3Q9UI47 895 aa20.7■□□□□ 0.9
CNOT3-209ENST00000617930 PFKFB2O60825 505 aa20.7■□□□□ 0.9
CNOT3-209ENST00000617930 HMGB2P26583 209 aaKnown RBP20.7■□□□□ 0.9
CNOT3-209ENST00000617930 CLCN1P35523 988 aa20.7■□□□□ 0.9
CNOT3-209ENST00000617930 BAG6P46379 1132 aa20.7■□□□□ 0.9
CNOT3-209ENST00000617930 IMMTQ16891 758 aaKnown RBP20.7■□□□□ 0.9
CNOT3-209ENST00000617930 MB21D2Q8IYB1 491 aaPredicted RBP20.7■□□□□ 0.9
CNOT3-209ENST00000617930 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
CNOT3-209ENST00000617930 ZSCAN23Q3MJ62 389 aa20.69■□□□□ 0.9
CNOT3-209ENST00000617930 DOCK2Q92608 1830 aa20.69■□□□□ 0.9
CNOT3-209ENST00000617930 VPS37CA5D8V6 355 aaPredicted RBP20.68■□□□□ 0.9
CNOT3-209ENST00000617930 UBE4AQ14139 1066 aa20.68■□□□□ 0.9
CNOT3-209ENST00000617930 TBC1D10CQ8IV04 446 aa20.68■□□□□ 0.9
CNOT3-209ENST00000617930 EPB41L4AQ9HCS5 686 aaPredicted RBP20.68■□□□□ 0.9
CNOT3-209ENST00000617930 TACC3Q9Y6A5 838 aa20.68■□□□□ 0.9
CNOT3-209ENST00000617930 HOXA10P31260 410 aaPredicted RBP20.68■□□□□ 0.9
CNOT3-209ENST00000617930 DNM1Q05193 864 aaKnown RBP20.68■□□□□ 0.9
CNOT3-209ENST00000617930 ADGRA1Q86SQ6 560 aa20.68■□□□□ 0.9
CNOT3-209ENST00000617930 FBXL16Q8N461 479 aa20.68■□□□□ 0.9
CNOT3-209ENST00000617930 TMEM87AQ8NBN3 555 aa20.68■□□□□ 0.9
CNOT3-209ENST00000617930 FAM84BQ96KN1 310 aaPredicted RBP20.68■□□□□ 0.9
CNOT3-209ENST00000617930 PDIA3P30101 505 aaKnown RBP20.67■□□□□ 0.9
CNOT3-209ENST00000617930 FAM173BQ6P4H8 233 aa20.67■□□□□ 0.9
CNOT3-209ENST00000617930 SMARCC2Q8TAQ2 1214 aa20.67■□□□□ 0.9
CNOT3-209ENST00000617930 ANP32BQ92688 251 aaKnown RBP20.67■□□□□ 0.9
CNOT3-209ENST00000617930 RPGRQ92834 1020 aaKnown RBP20.67■□□□□ 0.9
CNOT3-209ENST00000617930 GPR101Q96P66 508 aaPredicted RBP20.67■□□□□ 0.9
CNOT3-209ENST00000617930 NCOA5Q9HCD5 579 aaKnown RBP20.67■□□□□ 0.9
CNOT3-209ENST00000617930 INCENPQ9NQS7 918 aa20.67■□□□□ 0.9
CNOT3-209ENST00000617930 ZNF213O14771 459 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 PRKAB2O43741 272 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 NASPP49321 788 aaPredicted RBP20.66■□□□□ 0.9
CNOT3-209ENST00000617930 CCT2P78371 535 aaKnown RBP20.66■□□□□ 0.9
CNOT3-209ENST00000617930 FERMT3Q86UX7 667 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 NSUN7Q8NE18 718 aaKnown RBP20.66■□□□□ 0.9
CNOT3-209ENST00000617930 ARMT1Q9H993 441 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 LTBP1Q14766 1721 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 LRRC37AA6NMS7 1700 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 MBD4O95243 580 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 EVCP57679 992 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 FGD1P98174 961 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 MAP3K12Q12852 859 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 DDX11Q96FC9 970 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 BRIP1Q9BX63 1249 aa20.66■□□□□ 0.9
CNOT3-209ENST00000617930 PPFIA3O75145 1194 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 ZNF445P59923 1031 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 CCDC173Q0VFZ6 552 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 SF3B2Q13435 895 aaKnown RBP20.65■□□□□ 0.9
CNOT3-209ENST00000617930 LCORLQ8N3X6 602 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 AIDAQ96BJ3 306 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 TCHHQ07283 1943 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 GSG1L2A8MUP6 293 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 ESPNB1AK53 854 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 OLFM4Q6UX06 510 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 ZNF384Q8TF68 577 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 PARP3Q9Y6F1 533 aa20.65■□□□□ 0.9
CNOT3-209ENST00000617930 PRC1O43663 620 aa20.64■□□□□ 0.89
CNOT3-209ENST00000617930 APPP05067 770 aa20.64■□□□□ 0.89
CNOT3-209ENST00000617930 SRGNP10124 158 aa20.64■□□□□ 0.89
CNOT3-209ENST00000617930 GPSM2P81274 684 aa20.64■□□□□ 0.89
CNOT3-209ENST00000617930 FBXO33Q7Z6M2 555 aa20.64■□□□□ 0.89
CNOT3-209ENST00000617930 GOLGB1Q14789 3259 aaKnown RBP20.63■□□□□ 0.89
CNOT3-209ENST00000617930 PATL2C9JE40 543 aaKnown RBP20.63■□□□□ 0.89
CNOT3-209ENST00000617930 CYB5R4Q7L1T6 521 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 IFNL3Q8IZI9 196 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 ZNF274Q96GC6 653 aaPredicted RBP20.63■□□□□ 0.89
CNOT3-209ENST00000617930 CACNA1SQ13698 1873 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 SALL1Q9NSC2 1324 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 ALX1Q15699 326 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 MIGA1Q8NAN2 632 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms