RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 FBXO33Q7Z6M2 555 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 USP48Q86UV5 1035 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 LCORLQ8N3X6 602 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 MIGA1Q8NAN2 632 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 TFCP2L1Q9NZI6 479 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 RBM27Q9P2N5 1060 aaKnown RBP20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 CCT2P78371 535 aaKnown RBP20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 ALX1Q15699 326 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 PROM2Q8N271 834 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 ATP6V1DQ9Y5K8 247 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 PRKAB2O43741 272 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 CYP7A1P22680 504 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 PDIA3P30101 505 aaKnown RBP20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 TXNRD1Q16881 649 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 GAS2L3Q86XJ1 694 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 IFNL3Q8IZI9 196 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 FBXL16Q8N461 479 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 DDX11Q96FC9 970 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 NCOA5Q9HCD5 579 aaKnown RBP20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
PCDHGC3-205ENST00000617641 ADGRA1Q86SQ6 560 aa20.46■□□□□ 0.87
PCDHGC3-205ENST00000617641 NKX2-3Q8TAU0 364 aa20.46■□□□□ 0.87
PCDHGC3-205ENST00000617641 ZNF274Q96GC6 653 aaPredicted RBP20.46■□□□□ 0.87
PCDHGC3-205ENST00000617641 GSG1L2A8MUP6 293 aa20.45■□□□□ 0.87
PCDHGC3-205ENST00000617641 GADD45BO75293 160 aaPredicted RBP20.45■□□□□ 0.87
PCDHGC3-205ENST00000617641 FERMT3Q86UX7 667 aa20.45■□□□□ 0.87
PCDHGC3-205ENST00000617641 NAPBQ9H115 298 aa20.45■□□□□ 0.87
PCDHGC3-205ENST00000617641 CTDNEP1O95476 244 aa20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 RBM6P78332 1123 aaKnown RBP20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 DNM1Q05193 864 aaKnown RBP20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 GRAPQ13588 217 aa20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 NSUN7Q8NE18 718 aaKnown RBP20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 GRAPLQ8TC17 118 aaPredicted RBP20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 LLPHQ9BRT6 129 aaKnown RBP20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 SLC4A4Q9Y6R1 1079 aa20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 ZMYM6O95789 1325 aa20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 PNPLA7Q6ZV29 1317 aa20.45■□□□□ 0.86
PCDHGC3-205ENST00000617641 MBD3O95983 291 aa20.44■□□□□ 0.86
PCDHGC3-205ENST00000617641 SERPINB2P05120 415 aa20.44■□□□□ 0.86
PCDHGC3-205ENST00000617641 PDIA4P13667 645 aaKnown RBP20.44■□□□□ 0.86
PCDHGC3-205ENST00000617641 TRDNQ13061 729 aa20.44■□□□□ 0.86
PCDHGC3-205ENST00000617641 TMEM87AQ8NBN3 555 aa20.44■□□□□ 0.86
PCDHGC3-205ENST00000617641 ANO8Q9HCE9 1232 aaPredicted RBP20.44■□□□□ 0.86
PCDHGC3-205ENST00000617641 HIBADHP31937 336 aaKnown RBP20.44■□□□□ 0.86
PCDHGC3-205ENST00000617641 ZSCAN23Q3MJ62 389 aa20.44■□□□□ 0.86
PCDHGC3-205ENST00000617641 FIBPO43427 364 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 EVCP57679 992 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 TXNRD3Q86VQ6 643 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 TMEM63CQ9P1W3 806 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 BRPF3Q9ULD4 1205 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 NEDD4P46934 1319 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 CACNA1SQ13698 1873 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 PTPDC1A2A3K4 754 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 XRCC6P12956 609 aaKnown RBP eCLIP20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 GNAT2P19087 354 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 CTDSPL2Q05D32 466 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 CYB5R4Q7L1T6 521 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 INCENPQ9NQS7 918 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 MYH13Q9UKX3 1938 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 WDR19Q8NEZ3 1342 aa20.43■□□□□ 0.86
PCDHGC3-205ENST00000617641 KLF18A0A0U1RQI7 1052 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 B4E1Z4 1266 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 SEMA3EO15041 775 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 ZNF772Q68DY9 489 aaPredicted RBP20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 FAM184AQ8NB25 1140 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 PPFIA3O75145 1194 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 TDO2P48775 406 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 ST5P78524 1137 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 DDR1Q08345 913 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 RPGRQ92834 1020 aaKnown RBP20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 ANKIB1Q9P2G1 1089 aa20.42■□□□□ 0.86
PCDHGC3-205ENST00000617641 IRS2Q9Y4H2 1338 aa20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 MAGEB6P1A0A0J9YX57 407 aa20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 FAM173BQ6P4H8 233 aa20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 ZNF384Q8TF68 577 aa20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 GRPEL1Q9HAV7 217 aa20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 ISY1Q9ULR0 285 aaKnown RBP20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 TACC3Q9Y6A5 838 aa20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 CHAF1AQ13111 956 aaPredicted RBP20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 RAB11FIP4Q86YS3 637 aa20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 NACAP1Q9BZK3 213 aa20.41■□□□□ 0.86
PCDHGC3-205ENST00000617641 GOLGA8BA8MQT2 603 aa20.4■□□□□ 0.86
PCDHGC3-205ENST00000617641 MRE11P49959 708 aa20.4■□□□□ 0.86
PCDHGC3-205ENST00000617641 NAA16Q6N069 864 aaPredicted RBP20.4■□□□□ 0.86
PCDHGC3-205ENST00000617641 CHD4Q14839 1912 aa20.4■□□□□ 0.86
PCDHGC3-205ENST00000617641 SALL1Q9NSC2 1324 aa20.4■□□□□ 0.86
PCDHGC3-205ENST00000617641 FOSBP53539 338 aa20.39■□□□□ 0.86
PCDHGC3-205ENST00000617641 ZNF445P59923 1031 aa20.39■□□□□ 0.86
PCDHGC3-205ENST00000617641 HMGN5P82970 282 aaKnown RBP20.39■□□□□ 0.86
PCDHGC3-205ENST00000617641 CRY2Q49AN0 593 aa20.39■□□□□ 0.86
PCDHGC3-205ENST00000617641 TPRNQ4KMQ1 711 aa20.39■□□□□ 0.86
PCDHGC3-205ENST00000617641 SDR42E1Q8WUS8 393 aa20.39■□□□□ 0.86
PCDHGC3-205ENST00000617641 HPS5Q9UPZ3 1129 aa20.39■□□□□ 0.86
PCDHGC3-205ENST00000617641 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.85
PCDHGC3-205ENST00000617641 PDS5AQ29RF7 1337 aaKnown RBP20.39■□□□□ 0.85
PCDHGC3-205ENST00000617641 H3BQV1 296 aa20.39■□□□□ 0.85
PCDHGC3-205ENST00000617641 ZNF827Q17R98 1081 aa20.39■□□□□ 0.85
PCDHGC3-205ENST00000617641 IFFO2Q5TF58 517 aa20.39■□□□□ 0.85
PCDHGC3-205ENST00000617641 RIOK1Q9BRS2 568 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms