RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	UTP14A	Q9BVJ6	771 aa	Known RBP	13.29	□□□□□ -0.28
TP53-222	ENST00000617185	PRDM11	Q9NQV5	511 aa		13.29	□□□□□ -0.28
TP53-222	ENST00000617185	SNX14	Q9Y5W7	946 aa		13.29	□□□□□ -0.28
TP53-222	ENST00000617185	ERLIN1	O75477	346 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	LARP1B	Q659C4	914 aa	Known RBP	13.28	□□□□□ -0.28
TP53-222	ENST00000617185	TOM1L2	Q6ZVM7	507 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	POTED	Q86YR6	584 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	FMNL3	Q8IVF7	1028 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	DDX54	Q8TDD1	881 aa	Known RBP	13.28	□□□□□ -0.28
TP53-222	ENST00000617185	LEO1	Q8WVC0	666 aa	Predicted RBP	13.28	□□□□□ -0.28
TP53-222	ENST00000617185	SLC52A2	Q9HAB3	445 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	KDM6A	O15550	1401 aa	Predicted RBP	13.28	□□□□□ -0.28
TP53-222	ENST00000617185	DTNB	O60941	627 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	N4BP1	O75113	896 aa	Known RBP	13.28	□□□□□ -0.28
TP53-222	ENST00000617185	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.28	□□□□□ -0.28
TP53-222	ENST00000617185	RIC3	Q7Z5B4	369 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	RHPN1	Q8TCX5	695 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	ACBD3	Q9H3P7	528 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	PLEKHA4	Q9H4M7	779 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	VEZT	Q9HBM0	779 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	MRFAP1	Q9Y605	127 aa		13.28	□□□□□ -0.28
TP53-222	ENST00000617185	EXOC5	O00471	708 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	FANCG	O15287	622 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	NEBL	O76041	1014 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	LARGE1	O95461	756 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	PDC	P20941	246 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	DDR1	Q08345	913 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	SCRN1	Q12765	414 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	FBXW10	Q5XX13	1052 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	COPS6	Q7L5N1	327 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	TMC6	Q7Z403	805 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	SSH3	Q8TE77	659 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	CALR3	Q96L12	384 aa	Known RBP	13.27	□□□□□ -0.28
TP53-222	ENST00000617185	ANO10	Q9NW15	660 aa		13.27	□□□□□ -0.28
TP53-222	ENST00000617185	POTEB2	H3BUK9	544 aa		13.27	□□□□□ -0.29
TP53-222	ENST00000617185	GPT	P24298	496 aa		13.27	□□□□□ -0.29
TP53-222	ENST00000617185	USP5	P45974	858 aa		13.27	□□□□□ -0.29
TP53-222	ENST00000617185	PDIA6	Q15084	440 aa		13.27	□□□□□ -0.29
TP53-222	ENST00000617185	FERMT3	Q86UX7	667 aa		13.27	□□□□□ -0.29
TP53-222	ENST00000617185	XAGE3	Q8WTP9	111 aa		13.27	□□□□□ -0.29
TP53-222	ENST00000617185	ATP5J2-PTCD1	G3V325	749 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	ZSCAN12	O43309	604 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	PTCD1	O75127	700 aa	Known RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	FAM173B	Q6P4H8	233 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	TEX11	Q8IYF3	940 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	CEP57L1	Q8IYX8	460 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	NAT10	Q9H0A0	1025 aa	Known RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	HYPK	Q9NX55	129 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	SPATA31A3	Q5VYP0	1347 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	SALL3	Q9BXA9	1300 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	GCFC2	P16383	781 aa	Known RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	RDX	P35241	583 aa	Known RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	CPLX2	Q6PUV4	134 aa	Known RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	KSR2	Q6VAB6	950 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	CDC37L1	Q7L3B6	337 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	IFNL2	Q8IZJ0	200 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	CCDC102A	Q96A19	550 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	SUCLG2	Q96I99	432 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	CABS1	Q96KC9	395 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	MYD88	Q99836	296 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	FAM204A	Q9H8W3	233 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	TFIP11	Q9UBB9	837 aa	Known RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	L1RE1	Q9UN81	338 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	SPG7	Q9UQ90	795 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	CCDC9	Q9Y3X0	531 aa	Known RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	NAIF1	Q69YI7	327 aa	Predicted RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	TTC5	Q8N0Z6	440 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	AOPEP	Q8N6M6	819 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	CTCFL	Q8NI51	663 aa	Predicted RBP	13.26	□□□□□ -0.29
TP53-222	ENST00000617185	MCM8	Q9UJA3	840 aa		13.26	□□□□□ -0.29
TP53-222	ENST00000617185	KDM3B	Q7LBC6	1761 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	TUBGCP6	Q96RT7	1819 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	NF2	P35240	595 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	FCHSD1	Q86WN1	690 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	PRPF38A	Q8NAV1	312 aa	Known RBP	13.25	□□□□□ -0.29
TP53-222	ENST00000617185	PGBD1	Q96JS3	809 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	KDM4F	A0A1W2PPD8	638 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	EBAG9	O00559	213 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	IGKV5-2	P06315	115 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	CABP4	P57796	275 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	N4BP2L2	Q92802	583 aa	Predicted RBP	13.25	□□□□□ -0.29
TP53-222	ENST00000617185	FAM169A	Q9Y6X4	670 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	TNS3	Q68CZ2	1445 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	LMO7	Q8WWI1	1683 aa		13.25	□□□□□ -0.29
TP53-222	ENST00000617185	CACNA1F	O60840	1977 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	HOXB7	P09629	217 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	XPO4	Q9C0E2	1151 aa	Known RBP	13.24	□□□□□ -0.29
TP53-222	ENST00000617185	SLAIN2	Q9P270	581 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	RAB21	Q9UL25	225 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.24	□□□□□ -0.29
TP53-222	ENST00000617185	GOLGA6L9	A6NEM1	432 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	TMCO5B	A8MYB1	307 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	INPP5B	P32019	993 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	POLA2	Q14181	598 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	CRYM	Q14894	314 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	AFAP1L1	Q8TED9	768 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	KAZALD1	Q96I82	304 aa		13.24	□□□□□ -0.29
TP53-222	ENST00000617185	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
TP53-222	ENST00000617185	ALS2	Q96Q42	1657 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms