RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 KIF28PB7ZC32 967 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 FDPSP14324 419 aaKnown RBP15.14■□□□□ 0.01
MSH6-214ENST00000616033 STX17P56962 302 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 LEKR1Q6ZMV7 388 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 PHKBQ93100 1093 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 BAG1Q99933 345 aaPredicted RBP15.14■□□□□ 0.01
MSH6-214ENST00000616033 CARMIL3Q8ND23 1372 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 H3BQF6 201 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 ZRANB2O95218 330 aaKnown RBP eCLIP15.14■□□□□ 0.01
MSH6-214ENST00000616033 IGKV5-2P06315 115 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 FAM193AP78312 1265 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 GRAMD1CQ8IYS0 662 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 ZNF594Q96JF6 807 aaPredicted RBP15.14■□□□□ 0.01
MSH6-214ENST00000616033 FAM53CQ9NYF3 392 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 ZNF609O15014 1411 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 MED23Q9ULK4 1368 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 ZSCAN12O43309 604 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 WDHD1O75717 1129 aaPredicted RBP15.14■□□□□ 0.01
MSH6-214ENST00000616033 OVOS2A0A0J9YW53 1432 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 OVOS2Q6IE36 1432 aa15.14■□□□□ 0.01
MSH6-214ENST00000616033 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 DHX16O60231 1041 aaKnown RBP15.13■□□□□ 0.01
MSH6-214ENST00000616033 GIGYF1O75420 1035 aaPredicted RBP15.13■□□□□ 0.01
MSH6-214ENST00000616033 ZC3H6P61129 1189 aaKnown RBP15.13■□□□□ 0.01
MSH6-214ENST00000616033 NCAPHQ15003 741 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 LONRF2Q1L5Z9 754 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 MYSM1Q5VVJ2 828 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 REXO1L1PQ8IX06 675 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 CNNM3Q8NE01 707 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 SMARCC2Q8TAQ2 1214 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 MYL10Q9BUA6 226 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 NRXN3Q9Y4C0 1643 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 A0A087WZG4 1122 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 VWA3AA6NCI4 1184 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 UBE2Q2LH0YL09 131 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 MYL5Q02045 173 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 NFATC2IPQ8NCF5 419 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 PEAK1Q9H792 1746 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 DENND2AQ9ULE3 1009 aa15.13■□□□□ 0.01
MSH6-214ENST00000616033 TULP2O00295 520 aa15.12■□□□□ 0.01
MSH6-214ENST00000616033 KIF4BQ2VIQ3 1234 aa15.12■□□□□ 0.01
MSH6-214ENST00000616033 LMBR1LQ6UX01 489 aa15.12■□□□□ 0.01
MSH6-214ENST00000616033 MICU3Q86XE3 530 aa15.12■□□□□ 0.01
MSH6-214ENST00000616033 MROH7-TTC4A0A0A0MT08 1334 aa15.12■□□□□ 0.01
MSH6-214ENST00000616033 ANO1Q5XXA6 986 aa15.12■□□□□ 0.01
MSH6-214ENST00000616033 HSPD1P10809 573 aaKnown RBP15.11■□□□□ 0.01
MSH6-214ENST00000616033 PPARDQ03181 441 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 RALYLQ86SE5 291 aaKnown RBP15.11■□□□□ 0.01
MSH6-214ENST00000616033 KCNG4Q8TDN1 519 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 CWC15Q9P013 229 aaKnown RBP15.11■□□□□ 0.01
MSH6-214ENST00000616033 RRP15Q9Y3B9 282 aaKnown RBP15.11■□□□□ 0.01
MSH6-214ENST00000616033 TUBGCP6Q96RT7 1819 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 SOWAHDA6NJG2 315 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 CCDC158Q5M9N0 1113 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 JAKMIP3Q5VZ66 844 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 FAN1Q9Y2M0 1017 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 PDE4BQ07343 736 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 PAG1Q9NWQ8 432 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 RTEL1Q9NZ71 1219 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 PCDHA5Q9Y5H7 936 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 KDRP35968 1356 aa15.11■□□□□ 0.01
MSH6-214ENST00000616033 PES1O00541 588 aaKnown RBP15.1■□□□□ 0.01
MSH6-214ENST00000616033 CCP110O43303 1012 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 PRC1O43663 620 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 CDC27P30260 824 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 ZNF569Q5MCW4 686 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 IFIT1P09914 478 aaKnown RBP15.1■□□□□ 0.01
MSH6-214ENST00000616033 DNAJC21Q5F1R6 531 aaKnown RBP15.1■□□□□ 0.01
MSH6-214ENST00000616033 GOLGA1Q92805 767 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 NRKQ7Z2Y5 1582 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 CBFA2T2O43439 604 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 ATP5JP18859 108 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 PLEKHO1Q53GL0 409 aaPredicted RBP15.1■□□□□ 0.01
MSH6-214ENST00000616033 FKBP15Q5T1M5 1219 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 CABLES1Q8TDN4 633 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 LLPHQ9BRT6 129 aaKnown RBP15.1■□□□□ 0.01
MSH6-214ENST00000616033 NFE2L3Q9Y4A8 694 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 PHLPP2Q6ZVD8 1323 aa15.1■□□□□ 0.01
MSH6-214ENST00000616033 AKAP17AQ02040 695 aaKnown RBP15.09■□□□□ 0.01
MSH6-214ENST00000616033 GCKRQ14397 625 aa15.09■□□□□ 0.01
MSH6-214ENST00000616033 NFXL1Q6ZNB6 911 aa15.09■□□□□ 0.01
MSH6-214ENST00000616033 XRN1Q8IZH2 1706 aaKnown RBP15.09■□□□□ 0.01
MSH6-214ENST00000616033 NEURL1BA8MQ27 555 aa15.09■□□□□ 0.01
MSH6-214ENST00000616033 CASP1P29466 404 aa15.09■□□□□ 0.01
MSH6-214ENST00000616033 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
MSH6-214ENST00000616033 HSP90B2PQ58FF3 399 aa15.09■□□□□ 0.01
MSH6-214ENST00000616033 GPR161Q8N6U8 529 aaKnown RBP15.09■□□□□ 0.01
MSH6-214ENST00000616033 MRPL44Q9H9J2 332 aaKnown RBP15.09■□□□□ 0.01
MSH6-214ENST00000616033 SAMSN1Q9NSI8 373 aaKnown RBP15.09■□□□□ 0.01
MSH6-214ENST00000616033 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0.01
MSH6-214ENST00000616033 PTPN12Q05209 780 aaKnown RBP15.08■□□□□ 0.01
MSH6-214ENST00000616033 KBTBD3Q8NAB2 608 aa15.08■□□□□ 0.01
MSH6-214ENST00000616033 ALG1Q9BT22 464 aa15.08■□□□□ 0.01
MSH6-214ENST00000616033 FUT8Q9BYC5 575 aa15.08■□□□□ 0.01
MSH6-214ENST00000616033 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0
MSH6-214ENST00000616033 PI16Q6UXB8 463 aa15.08■□□□□ 0
MSH6-214ENST00000616033 CMTR1Q8N1G2 835 aaKnown RBP15.08■□□□□ 0
MSH6-214ENST00000616033 FBXO18Q8NFZ0 1043 aa15.08■□□□□ 0
MSH6-214ENST00000616033 STAMQ92783 540 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms