RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 DOK7Q18PE1 504 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 PRAMEF18Q5VWM3 479 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
FAM228B-209ENST00000615135 ARMC9Q7Z3E5 817 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 SHISA4Q96DD7 197 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 EYA3Q99504 573 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 EPAS1Q99814 870 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 NSFL1CQ9UNZ2 370 aaKnown RBP9.34□□□□□ -0.91
FAM228B-209ENST00000615135 NR2E3Q9Y5X4 410 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 LAMB4A4D0S4 1761 aa9.34□□□□□ -0.91
FAM228B-209ENST00000615135 FANCIQ9NVI1 1328 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 PSME4Q14997 1843 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 PRKAR2BP31323 418 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 FOSBP53539 338 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 LMOD3Q0VAK6 560 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 ARHGEF6Q15052 776 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 PHACTR3Q96KR7 559 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 HTATIP2Q9BUP3 242 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 ZBTB3Q9H5J0 574 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 PTCH2Q9Y6C5 1203 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 TTC28Q96AY4 2481 aa9.33□□□□□ -0.92
FAM228B-209ENST00000615135 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 TMPOP42166 694 aaKnown RBP9.32□□□□□ -0.92
FAM228B-209ENST00000615135 GPSM2P81274 684 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 CALD1Q05682 793 aaKnown RBP9.32□□□□□ -0.92
FAM228B-209ENST00000615135 OTUD7BQ6GQQ9 843 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.32□□□□□ -0.92
FAM228B-209ENST00000615135 TRMT2AQ8IZ69 625 aaKnown RBP9.32□□□□□ -0.92
FAM228B-209ENST00000615135 DEFB123Q8N688 67 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 TBC1D16Q8TBP0 767 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
FAM228B-209ENST00000615135 WNK4Q96J92 1243 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 REPIN1Q9BWE0 567 aaKnown RBP9.32□□□□□ -0.92
FAM228B-209ENST00000615135 FAM117AQ9C073 453 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 MTMR10Q9NXD2 777 aa9.32□□□□□ -0.92
FAM228B-209ENST00000615135 SCAF8Q9UPN6 1271 aaKnown RBP9.32□□□□□ -0.92
FAM228B-209ENST00000615135 IL16Q14005 1332 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 UNC80Q8N2C7 3258 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
FAM228B-209ENST00000615135 BMP8BP34820 402 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 NBPF9Q3BBW0 867 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 C20orf194Q5TEA3 1177 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 CENPQQ7L2Z9 268 aaPredicted RBP9.31□□□□□ -0.92
FAM228B-209ENST00000615135 LRP10Q7Z4F1 713 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 PARP9Q8IXQ6 854 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
FAM228B-209ENST00000615135 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 NLRP7Q8WX94 980 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 SLC10A4Q96EP9 437 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 PHOX2BQ99453 314 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 PTPN18Q99952 460 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 ADAM33Q9BZ11 813 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 ZC3H12CQ9C0D7 883 aaKnown RBP9.31□□□□□ -0.92
FAM228B-209ENST00000615135 PODXL2Q9NZ53 605 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 KIF16BQ96L93 1317 aa9.31□□□□□ -0.92
FAM228B-209ENST00000615135 HTATSF1O43719 755 aaKnown RBP9.3□□□□□ -0.92
FAM228B-209ENST00000615135 BCAR3O75815 825 aa9.3□□□□□ -0.92
FAM228B-209ENST00000615135 CT47B1P0C2W7 299 aaPredicted RBP9.3□□□□□ -0.92
FAM228B-209ENST00000615135 ANP32AP39687 249 aaKnown RBP9.3□□□□□ -0.92
FAM228B-209ENST00000615135 MMP14P50281 582 aa9.3□□□□□ -0.92
FAM228B-209ENST00000615135 RIPK4P57078 832 aa9.3□□□□□ -0.92
FAM228B-209ENST00000615135 SF3B3Q15393 1217 aaKnown RBP9.3□□□□□ -0.92
FAM228B-209ENST00000615135 TAF7Q15545 349 aaPredicted RBP9.3□□□□□ -0.92
FAM228B-209ENST00000615135 RSPH6AQ9H0K4 717 aa9.3□□□□□ -0.92
FAM228B-209ENST00000615135 SMC4Q9NTJ3 1288 aa9.3□□□□□ -0.92
FAM228B-209ENST00000615135 ANGEL1Q9UNK9 670 aaKnown RBP9.3□□□□□ -0.92
FAM228B-209ENST00000615135 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
FAM228B-209ENST00000615135 WNT10BO00744 389 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 GNRH1P01148 92 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 MS4A1P11836 297 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 GJA8P48165 433 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 PRMT2P55345 433 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 NFE2L2Q16236 605 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 LRIT3Q3SXY7 679 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 MCM10Q7L590 875 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 NLRP10Q86W26 655 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 CELF1Q92879 486 aaKnown RBP9.29□□□□□ -0.92
FAM228B-209ENST00000615135 TSR2Q969E8 191 aaKnown RBP9.29□□□□□ -0.92
FAM228B-209ENST00000615135 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 LAS1LQ9Y4W2 734 aaKnown RBP9.29□□□□□ -0.92
FAM228B-209ENST00000615135 AK9Q5TCS8 1911 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 SH3TC1Q8TE82 1336 aa9.29□□□□□ -0.92
FAM228B-209ENST00000615135 POTEMA6NI47 508 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 GJB1P08034 283 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 MYL6BP14649 208 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 PDE3AQ14432 1141 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 AMHR2Q16671 573 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 POTEGQ6S5H5 508 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 PODNQ7Z5L7 613 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 SH3TC2Q8TF17 1288 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 GDF15Q99988 308 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 STAP2Q9UGK3 403 aa9.28□□□□□ -0.92
FAM228B-209ENST00000615135 USP17L3A6NCW0 530 aa9.27□□□□□ -0.93
FAM228B-209ENST00000615135 USP17L4A6NCW7 530 aa9.27□□□□□ -0.93
FAM228B-209ENST00000615135 MYCP01106 439 aaPredicted RBP9.27□□□□□ -0.93
FAM228B-209ENST00000615135 CAPN2P17655 700 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms