RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 RASSF10A6NK89 507 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 G3V3G9 751 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 GOLIM4O00461 696 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 TRAF5O00463 557 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 CYP2E1P05181 493 aaPredicted RBP9.77□□□□□ -0.85
PCDH9-205ENST00000614931 UQCRFS1P1P0C7P4 283 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 HIBADHP31937 336 aaKnown RBP9.77□□□□□ -0.85
PCDH9-205ENST00000614931 FMR1Q06787 632 aaKnown RBP eCLIP9.77□□□□□ -0.857e-10■■■■■ 35
PCDH9-205ENST00000614931 SLFNL1Q499Z3 407 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 CST9Q5W186 159 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 PODNQ7Z5L7 613 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 TRPM4Q8TD43 1214 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 IL25Q9H293 177 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 PAG1Q9NWQ8 432 aa9.77□□□□□ -0.85
PCDH9-205ENST00000614931 CDC45O75419 566 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 SEC24BO95487 1268 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 EGFRP00533 1210 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 DEFB115Q30KQ5 88 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 TBC1D9Q6ZT07 1266 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 SAMD7Q7Z3H4 446 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 TDRD7Q8NHU6 1098 aaKnown RBP9.76□□□□□ -0.85
PCDH9-205ENST00000614931 EVI5LQ96CN4 794 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 CD209Q9NNX6 404 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 JAG2Q9Y219 1238 aa9.76□□□□□ -0.85
PCDH9-205ENST00000614931 ZBTB22O15209 634 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 HSPA1AP0DMV8 641 aaKnown RBP9.75□□□□□ -0.85
PCDH9-205ENST00000614931 HSPA1BP0DMV9 641 aaKnown RBP9.75□□□□□ -0.85
PCDH9-205ENST00000614931 IL1R1P14778 569 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 CHMLP26374 656 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 VEGFBP49765 207 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
PCDH9-205ENST00000614931 CAVIN4Q5BKX8 364 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 RSBN1LQ6PCB5 846 aaPredicted RBP9.75□□□□□ -0.85
PCDH9-205ENST00000614931 CDC37L1Q7L3B6 337 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 ZNF804AQ7Z570 1209 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 KBTBD3Q8NAB2 608 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 SPATA5Q8NB90 893 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 AGBL3Q8NEM8 1001 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 GMLQ99445 158 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 BACH2Q9BYV9 841 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 GLIS2Q9BZE0 524 aaPredicted RBP9.75□□□□□ -0.85
PCDH9-205ENST00000614931 RFX7Q2KHR2 1363 aa9.75□□□□□ -0.85
PCDH9-205ENST00000614931 A0A0D9SFI3 127 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 USP17L3A6NCW0 530 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 USP17L4A6NCW7 530 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 ZNF280AP59817 542 aaPredicted RBP9.74□□□□□ -0.85
PCDH9-205ENST00000614931 GRIK5Q16478 980 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 TBC1D10BQ4KMP7 808 aaPredicted RBP9.74□□□□□ -0.85
PCDH9-205ENST00000614931 USP17L1Q7RTZ2 530 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 VPS37DQ86XT2 251 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 FSD1Q9BTV5 496 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 COA1Q9GZY4 146 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 DENND2AQ9ULE3 1009 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 ABT1Q9ULW3 272 aaKnown RBP9.74□□□□□ -0.85
PCDH9-205ENST00000614931 ECM29Q5VYK3 1845 aa9.74□□□□□ -0.85
PCDH9-205ENST00000614931 PDS5AQ29RF7 1337 aaKnown RBP9.74□□□□□ -0.85
PCDH9-205ENST00000614931 FOCADQ5VW36 1801 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 SEMA3EO15041 775 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 NMIQ13287 307 aaPredicted RBP9.73□□□□□ -0.85
PCDH9-205ENST00000614931 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 DACT2Q5SW24 774 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 RBM26Q5T8P6 1007 aaKnown RBP9.73□□□□□ -0.85
PCDH9-205ENST00000614931 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 USP48Q86UV5 1035 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 ZNF384Q8TF68 577 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 FAM227BQ96M60 508 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 GNL3LQ9NVN8 582 aaKnown RBP9.73□□□□□ -0.85
PCDH9-205ENST00000614931 TLL2Q9Y6L7 1015 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 FAM205AQ6ZU69 1335 aa9.73□□□□□ -0.85
PCDH9-205ENST00000614931 WDR33Q9C0J8 1336 aaKnown RBP9.73□□□□□ -0.85
PCDH9-205ENST00000614931 BAZ2AQ9UIF9 1905 aaKnown RBP9.72□□□□□ -0.85
PCDH9-205ENST00000614931 TCRBV5S4A2TA0A5A2 114 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 CELF2O95319 508 aaKnown RBP9.72□□□□□ -0.85
PCDH9-205ENST00000614931 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 PRDX5P30044 214 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 COL13A1Q5TAT6 717 aaPredicted RBP9.72□□□□□ -0.85
PCDH9-205ENST00000614931 STRIP1Q5VSL9 837 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 SAPCD2Q86UD0 394 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 CERS5Q8N5B7 392 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 HHIPL1Q96JK4 782 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 SEC62Q99442 399 aaKnown RBP9.72□□□□□ -0.85
PCDH9-205ENST00000614931 ESYT1Q9BSJ8 1104 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 MXD3Q9BW11 206 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
PCDH9-205ENST00000614931 POLR2AP24928 1970 aaKnown RBP9.72□□□□□ -0.85
PCDH9-205ENST00000614931 THSD7BQ9C0I4 1608 aa9.71□□□□□ -0.85
PCDH9-205ENST00000614931 NAV1Q8NEY1 1877 aa9.71□□□□□ -0.85
PCDH9-205ENST00000614931 FRAT2O75474 233 aaPredicted RBP9.71□□□□□ -0.86
PCDH9-205ENST00000614931 IDH1O75874 414 aaKnown RBP9.71□□□□□ -0.86
PCDH9-205ENST00000614931 PDE6AP16499 860 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 ADD2P35612 726 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 ECE1P42892 770 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 MMP14P50281 582 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 GTF2IP78347 998 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 ZMYM1Q5SVZ6 1142 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 DLK2Q6UY11 383 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 CCDC129Q6ZRS4 1044 aa9.71□□□□□ -0.86
PCDH9-205ENST00000614931 KRT26Q7Z3Y9 468 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms