RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 WDR66Q8TBY9 1149 aa16.75■□□□□ 0.27
SNPH-203ENST00000614659 OTUD7AQ8TE49 926 aaPredicted RBP16.75■□□□□ 0.27
SNPH-203ENST00000614659 TCEANC2Q96MN5 208 aa16.75■□□□□ 0.27
SNPH-203ENST00000614659 PLA2R1Q13018 1463 aa16.75■□□□□ 0.27
SNPH-203ENST00000614659 N4BP3O15049 544 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
SNPH-203ENST00000614659 CDK12Q9NYV4 1490 aaPredicted RBP16.74■□□□□ 0.27
SNPH-203ENST00000614659 ANKARQ7Z5J8 1434 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
SNPH-203ENST00000614659 SSH3Q8TE77 659 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 KRT2P35908 639 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
SNPH-203ENST00000614659 GJA3Q9Y6H8 435 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 GNG11P61952 73 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 TBC1D22AQ8WUA7 517 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 ZMYND15Q9H091 742 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
SNPH-203ENST00000614659 PICK1Q9NRD5 415 aa16.74■□□□□ 0.27
SNPH-203ENST00000614659 RIMBP2O15034 1052 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 HIBADHP31937 336 aaKnown RBP16.73■□□□□ 0.27
SNPH-203ENST00000614659 CETN1Q12798 172 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 PICALMQ13492 652 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 RRAGBQ5VZM2 374 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 DPY19L2Q6NUT2 758 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 STAT6P42226 847 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 KRT27Q7Z3Y8 459 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 LAMC1P11047 1609 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 CEP112Q8N8E3 955 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 CPLX3Q8WVH0 158 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 CNKSR1Q969H4 720 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 TRIM47Q96LD4 638 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 STX8Q9UNK0 236 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 SLU7O95391 586 aaKnown RBP16.73■□□□□ 0.27
SNPH-203ENST00000614659 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
SNPH-203ENST00000614659 PPP1R2P41236 205 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
SNPH-203ENST00000614659 IBTKQ9P2D0 1353 aaPredicted RBP16.72■□□□□ 0.27
SNPH-203ENST00000614659 BRD1O95696 1058 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 KRT222Q8N1A0 295 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 PSMA7O14818 248 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 TUBBP07437 444 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 RBM26Q5T8P6 1007 aaKnown RBP16.72■□□□□ 0.27
SNPH-203ENST00000614659 LUZP1Q86V48 1076 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 NAP1L4Q99733 375 aaKnown RBP16.72■□□□□ 0.27
SNPH-203ENST00000614659 LMBRD1Q9NUN5 540 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 TMOD4Q9NZQ9 345 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 CCDC172P0C7W6 258 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 CHMP4BP1P59074 171 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 GPR162Q16538 588 aa16.72■□□□□ 0.27
SNPH-203ENST00000614659 TDRD12Q587J7 1177 aaKnown RBP16.71■□□□□ 0.27
SNPH-203ENST00000614659 PPP2R5BQ15173 497 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 TMC4Q7Z404 712 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 RBSNQ9H1K0 784 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 MROH5Q6ZUA9 1318 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 PNMA6EA0A0J9YXQ4 647 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 CCDC175P0C221 793 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 MICALCLQ6ZW33 695 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNPH-203ENST00000614659 APPBP2Q92624 585 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 OSBPL3Q9H4L5 887 aa16.71■□□□□ 0.27
SNPH-203ENST00000614659 ZHX1Q9UKY1 873 aaPredicted RBP16.71■□□□□ 0.27
SNPH-203ENST00000614659 ABCC3O15438 1527 aa16.7■□□□□ 0.26
SNPH-203ENST00000614659 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
SNPH-203ENST00000614659 DSCC1Q9BVC3 393 aa16.7■□□□□ 0.26
SNPH-203ENST00000614659 PHKG2P15735 406 aa16.7■□□□□ 0.26
SNPH-203ENST00000614659 ATP5JP18859 108 aa16.7■□□□□ 0.26
SNPH-203ENST00000614659 RAB11FIP4Q86YS3 637 aa16.7■□□□□ 0.26
SNPH-203ENST00000614659 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
SNPH-203ENST00000614659 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
SNPH-203ENST00000614659 DDX17Q92841 729 aaKnown RBP16.7■□□□□ 0.26
SNPH-203ENST00000614659 RGS12O14924 1447 aa16.7■□□□□ 0.26
SNPH-203ENST00000614659 POLR3GO15318 223 aaPredicted RBP16.69■□□□□ 0.26
SNPH-203ENST00000614659 KRT83P78385 493 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 TCIRG1Q13488 830 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 GCKRQ14397 625 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 C6orf50Q9HD87 102 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 STAP2Q9UGK3 403 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 H7C1D1 291 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 ITGA6P23229 1130 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 SUCLG2Q96I99 432 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
SNPH-203ENST00000614659 METP08581 1390 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 SPDYE4A6NLX3 237 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 GBP2P32456 591 aaPredicted RBP16.69■□□□□ 0.26
SNPH-203ENST00000614659 DNAJC10Q8IXB1 793 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 NEBLO76041 1014 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 GTF2F1P35269 517 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNPH-203ENST00000614659 MYL5Q02045 173 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 GRM1Q13255 1194 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 ARHGEF10LQ9HCE6 1279 aa16.69■□□□□ 0.26
SNPH-203ENST00000614659 A0A1B0GUL7 405 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 CTAGE15A4D2H0 777 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 CTAGE8P0CG41 777 aa16.68■□□□□ 0.26
SNPH-203ENST00000614659 MARCKSP29966 332 aaPredicted RBP16.68■□□□□ 0.26
SNPH-203ENST00000614659 TUBB2AQ13885 445 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms