RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 GOLGA8AA7E2F4 631 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 PFKFB2O60825 505 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 PLA2G4AP47712 749 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 ANKRD20A12PQ8NF67 263 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
CDH5-208ENST00000614547 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 SARM1Q6SZW1 724 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 CMTR1Q8N1G2 835 aaKnown RBP13.49□□□□□ -0.25
CDH5-208ENST00000614547 WDR24Q96S15 920 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 RUFY1Q96T51 708 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 CRACR2AQ9BSW2 395 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 GUCA1BQ9UMX6 200 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 MAPK8IP1Q9UQF2 711 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 CCDC175P0C221 793 aa13.48□□□□□ -0.25
CDH5-208ENST00000614547 CCDC57Q2TAC2 916 aa13.48□□□□□ -0.25
CDH5-208ENST00000614547 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
CDH5-208ENST00000614547 ATP7BP35670 1465 aa13.48□□□□□ -0.25
CDH5-208ENST00000614547 LONRF2Q1L5Z9 754 aa13.48□□□□□ -0.25
CDH5-208ENST00000614547 POLR2DO15514 142 aaKnown RBP13.48□□□□□ -0.25
CDH5-208ENST00000614547 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
CDH5-208ENST00000614547 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
CDH5-208ENST00000614547 FAM107BQ9H098 131 aa13.48□□□□□ -0.25
CDH5-208ENST00000614547 ARAP3Q8WWN8 1544 aa13.48□□□□□ -0.25
CDH5-208ENST00000614547 ADCY9O60503 1353 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
CDH5-208ENST00000614547 ZMYND10O75800 440 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 CYP2C19P33261 490 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 PCDHA5Q9Y5H7 936 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 SBNO1A3KN83 1393 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 CTAGE15A4D2H0 777 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 EFCAB8A8MWE9 144 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 MYO1CO00159 1063 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 IFIT3O14879 490 aaKnown RBP13.47□□□□□ -0.25
CDH5-208ENST00000614547 GCP02774 474 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 CTAGE8P0CG41 777 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 CTAGE6Q86UF2 777 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 CTAGE4Q8IX94 777 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 LINC00301Q8NCQ3 95 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 KCNH3Q9ULD8 1083 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 FAN1Q9Y2M0 1017 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 FHOD1Q9Y613 1164 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 SETBP1Q9Y6X0 1596 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 CPS1P31327 1500 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 ERICH2A1L162 156 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 N4BP3O15049 544 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 ARHGAP6O43182 974 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 TOGARAM2Q6ZUX3 1019 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
CDH5-208ENST00000614547 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 hCG_1642624A0A1W2PR95 340 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 MTF1Q14872 753 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 E2F4Q16254 413 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 TTC31Q49AM3 519 aaPredicted RBP13.46□□□□□ -0.25
CDH5-208ENST00000614547 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 KBTBD3Q8NAB2 608 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 SUGCTQ9HAC7 445 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 ADAM21Q9UKJ8 722 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 KCNJ14Q9UNX9 436 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 PTPRMP28827 1452 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 DIP2BQ9P265 1576 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 HSPD1P10809 573 aaKnown RBP13.46□□□□□ -0.25
CDH5-208ENST00000614547 DHX8Q14562 1220 aaKnown RBP13.46□□□□□ -0.25
CDH5-208ENST00000614547 TMEM67Q5HYA8 995 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 KIAA1328Q86T90 577 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 TRIM22Q8IYM9 498 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 FMR1NBQ8N0W7 255 aaPredicted RBP13.46□□□□□ -0.25
CDH5-208ENST00000614547 EEF2KMTQ96G04 330 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 LLPHQ9BRT6 129 aaKnown RBP13.46□□□□□ -0.25
CDH5-208ENST00000614547 CNNM1Q9NRU3 951 aa13.46□□□□□ -0.25
CDH5-208ENST00000614547 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.46□□□□□ -0.25
CDH5-208ENST00000614547 RRP15Q9Y3B9 282 aaKnown RBP13.46□□□□□ -0.25
CDH5-208ENST00000614547 NRXN1Q9ULB1 1477 aa13.46□□□□□ -0.26
CDH5-208ENST00000614547 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.26
CDH5-208ENST00000614547 GIGYF1O75420 1035 aaPredicted RBP13.46□□□□□ -0.26
CDH5-208ENST00000614547 GCKRQ14397 625 aa13.46□□□□□ -0.26
CDH5-208ENST00000614547 DACH1Q9UI36 760 aa13.46□□□□□ -0.26
CDH5-208ENST00000614547 FOXN1O15353 648 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 MNAT1P51948 309 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
CDH5-208ENST00000614547 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 IGSF22Q8N9C0 903 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 VPS16Q9H269 839 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 CTAGE9A4FU28 777 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 SOWAHDA6NJG2 315 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 B4E1Z4 1266 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 TTC19Q6DKK2 380 aaPredicted RBP13.45□□□□□ -0.26
CDH5-208ENST00000614547 CCDC70Q6NSX1 233 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 GPR161Q8N6U8 529 aaKnown RBP13.45□□□□□ -0.26
CDH5-208ENST00000614547 MPHOSPH8Q99549 860 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 IGSF1Q8N6C5 1336 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 ATP5JP18859 108 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 CABP4P57796 275 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 KRT40Q6A162 431 aa13.45□□□□□ -0.26
CDH5-208ENST00000614547 DDX21Q9NR30 783 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDH5-208ENST00000614547 FEZ2Q9UHY8 353 aaPredicted RBP13.45□□□□□ -0.26
CDH5-208ENST00000614547 CARMIL3Q8ND23 1372 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms