RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 MECOMQ03112 1051 aa22.53■■□□□ 1.2
CHTOP-207ENST00000614256 TTLL5Q6EMB2 1281 aa22.53■■□□□ 1.2
CHTOP-207ENST00000614256 NSUN4Q96CB9 384 aaKnown RBP22.53■■□□□ 1.2
CHTOP-207ENST00000614256 ANO2Q9NQ90 1003 aa22.53■■□□□ 1.2
CHTOP-207ENST00000614256 LTBP3Q9NS15 1303 aa22.53■■□□□ 1.2
CHTOP-207ENST00000614256 USP26Q9BXU7 913 aa22.52■■□□□ 1.2
CHTOP-207ENST00000614256 LSG1Q9H089 658 aaKnown RBP22.52■■□□□ 1.2
CHTOP-207ENST00000614256 VPS33BQ9H267 617 aa22.52■■□□□ 1.2
CHTOP-207ENST00000614256 ADAMTSL1Q8N6G6 1762 aa22.52■■□□□ 1.2
CHTOP-207ENST00000614256 REC8O95072 547 aa22.52■■□□□ 1.2
CHTOP-207ENST00000614256 YBX3P16989 372 aaKnown RBP eCLIP22.52■■□□□ 1.21e-9■■□□□ 12.3
CHTOP-207ENST00000614256 PTH1RQ03431 593 aa22.52■■□□□ 1.2
CHTOP-207ENST00000614256 DICER1Q9UPY3 1922 aaKnown RBP22.52■■□□□ 1.2
CHTOP-207ENST00000614256 LDHBP07195 334 aaKnown RBP22.51■■□□□ 1.19
CHTOP-207ENST00000614256 ZGPATQ8N5A5 531 aaKnown RBP22.51■■□□□ 1.19
CHTOP-207ENST00000614256 CYP7A1P22680 504 aa22.5■■□□□ 1.19
CHTOP-207ENST00000614256 SPTY2D1Q68D10 685 aaPredicted RBP22.5■■□□□ 1.19
CHTOP-207ENST00000614256 TBC1D22AQ8WUA7 517 aa22.5■■□□□ 1.19
CHTOP-207ENST00000614256 CCDC171Q6TFL3 1326 aa22.5■■□□□ 1.19
CHTOP-207ENST00000614256 NAA16Q6N069 864 aaPredicted RBP22.5■■□□□ 1.19
CHTOP-207ENST00000614256 DACT2Q5SW24 774 aa22.49■■□□□ 1.19
CHTOP-207ENST00000614256 VPS53Q5VIR6 699 aa22.49■■□□□ 1.19
CHTOP-207ENST00000614256 STRIP1Q5VSL9 837 aa22.49■■□□□ 1.19
CHTOP-207ENST00000614256 TBC1D32Q96NH3 1257 aa22.49■■□□□ 1.19
CHTOP-207ENST00000614256 USP17L3A6NCW0 530 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 USP17L4A6NCW7 530 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 DIXDC1Q155Q3 683 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 ARHGAP27Q6ZUM4 889 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 USP17L1Q7RTZ2 530 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 DZIP1Q86YF9 867 aaKnown RBP22.48■■□□□ 1.19
CHTOP-207ENST00000614256 NIM1KQ8IY84 436 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 MIGA1Q8NAN2 632 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 C22orf23Q9BZE7 217 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 UPF2Q9HAU5 1272 aaKnown RBP22.48■■□□□ 1.19
CHTOP-207ENST00000614256 CDK5RAP2Q96SN8 1893 aa22.48■■□□□ 1.19
CHTOP-207ENST00000614256 FOXP2O15409 715 aa22.47■■□□□ 1.19
CHTOP-207ENST00000614256 GPAA1O43292 621 aa22.47■■□□□ 1.19
CHTOP-207ENST00000614256 KIAA1211Q6ZU35 1233 aa22.47■■□□□ 1.19
CHTOP-207ENST00000614256 ZNRF3Q9ULT6 936 aa22.47■■□□□ 1.19
CHTOP-207ENST00000614256 RAD17O75943 681 aa22.46■■□□□ 1.19
CHTOP-207ENST00000614256 MBD4O95243 580 aa22.46■■□□□ 1.19
CHTOP-207ENST00000614256 ARMT1Q9H993 441 aa22.46■■□□□ 1.19
CHTOP-207ENST00000614256 RBM19Q9Y4C8 960 aaKnown RBP22.46■■□□□ 1.19
CHTOP-207ENST00000614256 F8W031 263 aaPredicted RBP22.45■■□□□ 1.19
CHTOP-207ENST00000614256 LCORLQ8N3X6 602 aa22.45■■□□□ 1.19
CHTOP-207ENST00000614256 EIF5BO60841 1220 aaKnown RBP22.45■■□□□ 1.18
CHTOP-207ENST00000614256 DYNLL1P63167 89 aaKnown RBP22.45■■□□□ 1.18
CHTOP-207ENST00000614256 MAP4K1Q92918 833 aa22.45■■□□□ 1.18
CHTOP-207ENST00000614256 STRBPQ96SI9 672 aaKnown RBP22.45■■□□□ 1.18
CHTOP-207ENST00000614256 RIOK1Q9BRS2 568 aaKnown RBP22.45■■□□□ 1.18
CHTOP-207ENST00000614256 PSMD14O00487 310 aa22.44■■□□□ 1.18
CHTOP-207ENST00000614256 RBM25P49756 843 aaKnown RBP22.44■■□□□ 1.18
CHTOP-207ENST00000614256 JDP2Q8WYK2 163 aa22.44■■□□□ 1.18
CHTOP-207ENST00000614256 AIDAQ96BJ3 306 aa22.44■■□□□ 1.18
CHTOP-207ENST00000614256 BAZ2AQ9UIF9 1905 aaKnown RBP22.44■■□□□ 1.18
CHTOP-207ENST00000614256 HSPD1P10809 573 aaKnown RBP22.43■■□□□ 1.18
CHTOP-207ENST00000614256 FKBP1AP62942 108 aaKnown RBP22.43■■□□□ 1.18
CHTOP-207ENST00000614256 SUGT1Q9Y2Z0 365 aa22.43■■□□□ 1.18
CHTOP-207ENST00000614256 MAGEB6P1A0A0J9YX57 407 aa22.43■■□□□ 1.18
CHTOP-207ENST00000614256 CXCL9Q07325 125 aa22.43■■□□□ 1.18
CHTOP-207ENST00000614256 KIAA0825Q8IV33 1275 aa22.43■■□□□ 1.18
CHTOP-207ENST00000614256 PALD1Q9ULE6 856 aa22.43■■□□□ 1.18
CHTOP-207ENST00000614256 TTF2Q9UNY4 1162 aaKnown RBP22.43■■□□□ 1.18
CHTOP-207ENST00000614256 RBM8AQ9Y5S9 174 aaKnown RBP22.43■■□□□ 1.18
CHTOP-207ENST00000614256 TIAM2Q8IVF5 1701 aa22.42■■□□□ 1.18
CHTOP-207ENST00000614256 MROH7-TTC4A0A0A0MT08 1334 aa22.42■■□□□ 1.18
CHTOP-207ENST00000614256 PRKAB2O43741 272 aa22.42■■□□□ 1.18
CHTOP-207ENST00000614256 IGSF3O75054 1194 aa22.42■■□□□ 1.18
CHTOP-207ENST00000614256 SCNN1DP51172 638 aa22.42■■□□□ 1.18
CHTOP-207ENST00000614256 AATFQ9NY61 560 aaKnown RBP eCLIP22.42■■□□□ 1.18
CHTOP-207ENST00000614256 EPB41L2O43491 1005 aaKnown RBP22.41■■□□□ 1.18
CHTOP-207ENST00000614256 VIL1P09327 827 aaKnown RBP22.41■■□□□ 1.18
CHTOP-207ENST00000614256 GSTO1P78417 241 aa22.41■■□□□ 1.18
CHTOP-207ENST00000614256 ECM29Q5VYK3 1845 aa22.41■■□□□ 1.18
CHTOP-207ENST00000614256 HSPA4P34932 840 aa22.41■■□□□ 1.18
CHTOP-207ENST00000614256 TMED8Q6PL24 325 aaPredicted RBP22.41■■□□□ 1.18
CHTOP-207ENST00000614256 KIF2CQ99661 725 aa22.41■■□□□ 1.18
CHTOP-207ENST00000614256 DSCC1Q9BVC3 393 aa22.41■■□□□ 1.18
CHTOP-207ENST00000614256 GAKO14976 1311 aa22.4■■□□□ 1.18
CHTOP-207ENST00000614256 LAMA4Q16363 1823 aa22.4■■□□□ 1.18
CHTOP-207ENST00000614256 NECTIN1Q15223 517 aa22.4■■□□□ 1.18
CHTOP-207ENST00000614256 RSBN1LQ6PCB5 846 aaPredicted RBP22.4■■□□□ 1.18
CHTOP-207ENST00000614256 ZBTB12Q9Y330 459 aaPredicted RBP22.4■■□□□ 1.18
CHTOP-207ENST00000614256 DAGLAQ9Y4D2 1042 aa22.4■■□□□ 1.18
CHTOP-207ENST00000614256 FOCADQ5VW36 1801 aa22.39■■□□□ 1.18
CHTOP-207ENST00000614256 FZD9O00144 591 aa22.39■■□□□ 1.17
CHTOP-207ENST00000614256 LMNB1P20700 586 aa22.39■■□□□ 1.17
CHTOP-207ENST00000614256 FAM163AQ96GL9 167 aaPredicted RBP22.39■■□□□ 1.17
CHTOP-207ENST00000614256 GMLQ99445 158 aa22.39■■□□□ 1.17
CHTOP-207ENST00000614256 LDHCP07864 332 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 EPB41L4AQ9HCS5 686 aaPredicted RBP22.38■■□□□ 1.17
CHTOP-207ENST00000614256 PCDHAC2Q9Y5I4 1007 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 GPR75-ASB3A0A0A6YYF3 556 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 GSG1L2A8MUP6 293 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 BTDP43251 543 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 CIAPIN1Q6FI81 312 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 RASEFQ8IZ41 740 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 TAF6LQ9Y6J9 622 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 SLC4A4Q9Y6R1 1079 aa22.38■■□□□ 1.17
CHTOP-207ENST00000614256 GPR162Q16538 588 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms