RNA–Protein interactions for RNA: ENST00000614239.1

LHX1-201, Transcript of LIM homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX1, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-201ENST00000614239 CRACR2AQ9BSW2 395 aa16.15■□□□□ 0.18
LHX1-201ENST00000614239 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
LHX1-201ENST00000614239 ZMYND10O75800 440 aa16.14■□□□□ 0.17
LHX1-201ENST00000614239 ADKP55263 362 aaKnown RBP16.14■□□□□ 0.17
LHX1-201ENST00000614239 SARM1Q6SZW1 724 aa16.14■□□□□ 0.17
LHX1-201ENST00000614239 CLASRPQ8N2M8 674 aaKnown RBP16.14■□□□□ 0.17
LHX1-201ENST00000614239 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
LHX1-201ENST00000614239 ADGRB2O60241 1585 aa16.14■□□□□ 0.17
LHX1-201ENST00000614239 CPSF1Q10570 1443 aaKnown RBP16.14■□□□□ 0.17
LHX1-201ENST00000614239 SCRN1Q12765 414 aa16.14■□□□□ 0.17
LHX1-201ENST00000614239 TTC41PQ6P2S7 1318 aa16.14■□□□□ 0.17
LHX1-201ENST00000614239 EHD4Q9H223 541 aa16.14■□□□□ 0.17
LHX1-201ENST00000614239 PLEKHG1Q9ULL1 1385 aa16.14■□□□□ 0.17
LHX1-201ENST00000614239 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.14■□□□□ 0.17
LHX1-201ENST00000614239 TECPR2O15040 1411 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 PTH1RQ03431 593 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 PROSER3Q2NL68 480 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 EXOC5O00471 708 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 PPP1R12AO14974 1030 aaPredicted RBP16.13■□□□□ 0.17
LHX1-201ENST00000614239 FANCCQ00597 558 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 NEDD9Q14511 834 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 RIC3Q7Z5B4 369 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 DDX17Q92841 729 aaKnown RBP16.13■□□□□ 0.17
LHX1-201ENST00000614239 EDC3Q96F86 508 aaKnown RBP16.13■□□□□ 0.17
LHX1-201ENST00000614239 GNL3LQ9NVN8 582 aaKnown RBP16.13■□□□□ 0.17
LHX1-201ENST00000614239 GBP2P32456 591 aaPredicted RBP16.13■□□□□ 0.17
LHX1-201ENST00000614239 ELF1P32519 619 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 VPS53Q5VIR6 699 aa16.13■□□□□ 0.17
LHX1-201ENST00000614239 TTC14Q96N46 770 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 PTPRUQ92729 1446 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 SGSM2O43147 1006 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 BRD3Q15059 726 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 FLT4P35916 1363 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 PLEKHG3A1L390 1219 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 MTX1Q13505 466 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 ZNF569Q5MCW4 686 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 SWT1Q5T5J6 900 aaKnown RBP16.12■□□□□ 0.17
LHX1-201ENST00000614239 PNKPQ96T60 521 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 MPHOSPH8Q99549 860 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 IMPACTQ9P2X3 320 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 MED14O60244 1454 aa16.12■□□□□ 0.17
LHX1-201ENST00000614239 ATP7BP35670 1465 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 CTAGE5O15320 804 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
LHX1-201ENST00000614239 ORAI2Q96SN7 254 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 PLCD4Q9BRC7 762 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 IRAK4Q9NWZ3 460 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 PHF8Q9UPP1 1060 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 KNDC1Q76NI1 1749 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 AATKQ6ZMQ8 1374 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 GSCP56915 257 aaPredicted RBP16.11■□□□□ 0.17
LHX1-201ENST00000614239 RUFY2Q8WXA3 655 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 CABS1Q96KC9 395 aa16.11■□□□□ 0.17
LHX1-201ENST00000614239 CPSF2Q9P2I0 782 aaKnown RBP16.11■□□□□ 0.17
LHX1-201ENST00000614239 VSNL1P62760 191 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 IQUBQ8NA54 791 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 BAG1Q99933 345 aaPredicted RBP16.1■□□□□ 0.17
LHX1-201ENST00000614239 GOLPH3LQ9H4A5 285 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 NDUFAB1O14561 156 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 STK38Q15208 465 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 FSD1Q9BTV5 496 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 TRIM6Q9C030 488 aaPredicted RBP16.1■□□□□ 0.17
LHX1-201ENST00000614239 ATP5J2-PTCD1G3V325 749 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 PTCD1O75127 700 aaKnown RBP16.1■□□□□ 0.17
LHX1-201ENST00000614239 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
LHX1-201ENST00000614239 LONRF3Q496Y0 759 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 TRIM65Q6PJ69 517 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 CABLES1Q8TDN4 633 aa16.1■□□□□ 0.17
LHX1-201ENST00000614239 NOC3LQ8WTT2 800 aaKnown RBP16.1■□□□□ 0.17
LHX1-201ENST00000614239 FANCGO15287 622 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 KIF5CO60282 957 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 SLC3A2P08195 630 aaKnown RBP16.09■□□□□ 0.17
LHX1-201ENST00000614239 ARMC3Q5W041 872 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 THEMISQ8N1K5 641 aaPredicted RBP16.09■□□□□ 0.17
LHX1-201ENST00000614239 CDK12Q9NYV4 1490 aaPredicted RBP16.09■□□□□ 0.17
LHX1-201ENST00000614239 TMEM232C9JQI7 657 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 CCT2P78371 535 aaKnown RBP16.09■□□□□ 0.17
LHX1-201ENST00000614239 TOGARAM2Q6ZUX3 1019 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 OSBPL5Q9H0X9 879 aaPredicted RBP16.09■□□□□ 0.17
LHX1-201ENST00000614239 POLR3DP05423 398 aaPredicted RBP16.09■□□□□ 0.17
LHX1-201ENST00000614239 SSR1P43307 286 aaKnown RBP16.09■□□□□ 0.17
LHX1-201ENST00000614239 AP1ARQ63HQ0 302 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 IGSF22Q8N9C0 903 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 FAM76AQ8TAV0 307 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.09■□□□□ 0.17
LHX1-201ENST00000614239 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
LHX1-201ENST00000614239 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.16
LHX1-201ENST00000614239 GSPT2Q8IYD1 628 aaKnown RBP16.08■□□□□ 0.16
LHX1-201ENST00000614239 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
LHX1-201ENST00000614239 RBM8AQ9Y5S9 174 aaKnown RBP16.08■□□□□ 0.16
LHX1-201ENST00000614239 MRFAP1Q9Y605 127 aa16.08■□□□□ 0.16
LHX1-201ENST00000614239 ARHGAP23Q9P227 1491 aa16.08■□□□□ 0.16
LHX1-201ENST00000614239 CTAGE15A4D2H0 777 aa16.08■□□□□ 0.16
LHX1-201ENST00000614239 PPP1R12BO60237 982 aaPredicted RBP16.08■□□□□ 0.16
LHX1-201ENST00000614239 CTAGE8P0CG41 777 aa16.08■□□□□ 0.16
LHX1-201ENST00000614239 GNGT1P63211 74 aa16.08■□□□□ 0.16
LHX1-201ENST00000614239 BEND6Q5SZJ8 279 aaPredicted RBP16.08■□□□□ 0.16
LHX1-201ENST00000614239 CTAGE6Q86UF2 777 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms