RNA–Protein interactions for RNA: ENST00000613478.1

CISD3-204, Transcript of CDGSH iron sulfur domain 3, human

APPRIS P1 TSL 2 BASIC

Gene CISD3, Length 2,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CISD3-204	ENST00000613478	VPS37D	Q86XT2	251 aa		32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	LRP2BP	Q9P2M1	347 aa		32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	VPS37C	A5D8V6	355 aa	Predicted RBP	32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	APP	P05067	770 aa		32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	SERPINB2	P05120	415 aa		32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	UBE2H	P62256	183 aa		32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	RRAGD	Q9NQL2	400 aa	Predicted RBP	32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	GNL3L	Q9NVN8	582 aa	Known RBP	32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	TFCP2L1	Q9NZI6	479 aa		32.63	■■■□□ 2.81
CISD3-204	ENST00000613478	MBD4	O95243	580 aa		32.62	■■■□□ 2.81
CISD3-204	ENST00000613478	FGD1	P98174	961 aa		32.62	■■■□□ 2.81
CISD3-204	ENST00000613478	FBXO33	Q7Z6M2	555 aa		32.62	■■■□□ 2.81
CISD3-204	ENST00000613478	ANKRD2	Q9GZV1	360 aa		32.62	■■■□□ 2.81
CISD3-204	ENST00000613478	ARMT1	Q9H993	441 aa		32.62	■■■□□ 2.81
CISD3-204	ENST00000613478	ABCF2	Q9UG63	623 aa		32.62	■■■□□ 2.81
CISD3-204	ENST00000613478	APBA3	O96018	575 aa		32.61	■■■□□ 2.81
CISD3-204	ENST00000613478	ZNF827	Q17R98	1081 aa		32.61	■■■□□ 2.81
CISD3-204	ENST00000613478	NBPF3	Q9H094	633 aa		32.61	■■■□□ 2.81
CISD3-204	ENST00000613478	ZNF213	O14771	459 aa		32.6	■■■□□ 2.81
CISD3-204	ENST00000613478	DDR1	Q08345	913 aa		32.6	■■■□□ 2.81
CISD3-204	ENST00000613478	TCHH	Q07283	1943 aa		32.6	■■■□□ 2.81
CISD3-204	ENST00000613478	APOBR	Q0VD83	1088 aa		32.59	■■■□□ 2.81
CISD3-204	ENST00000613478	GRAP	Q13588	217 aa		32.59	■■■□□ 2.81
CISD3-204	ENST00000613478	TXNRD3	Q86VQ6	643 aa		32.59	■■■□□ 2.81
CISD3-204	ENST00000613478	GRAPL	Q8TC17	118 aa	Predicted RBP	32.59	■■■□□ 2.81
CISD3-204	ENST00000613478	FIBP	O43427	364 aa		32.58	■■■□□ 2.81
CISD3-204	ENST00000613478	MIGA1	Q8NAN2	632 aa		32.58	■■■□□ 2.81
CISD3-204	ENST00000613478	GTF3C6	Q969F1	213 aa		32.58	■■■□□ 2.81
CISD3-204	ENST00000613478	AGXT2	Q9BYV1	514 aa		32.58	■■■□□ 2.81
CISD3-204	ENST00000613478	GPHN	Q9NQX3	736 aa	Predicted RBP	32.58	■■■□□ 2.81
CISD3-204	ENST00000613478	DENND2A	Q9ULE3	1009 aa		32.58	■■■□□ 2.81
CISD3-204	ENST00000613478	RXRB	P28702	533 aa		32.57	■■■□□ 2.8
CISD3-204	ENST00000613478	ADGRA1	Q86SQ6	560 aa		32.57	■■■□□ 2.8
CISD3-204	ENST00000613478	PRKAB2	O43741	272 aa		32.57	■■■□□ 2.8
CISD3-204	ENST00000613478	DNM1	Q05193	864 aa	Known RBP	32.57	■■■□□ 2.8
CISD3-204	ENST00000613478	LCORL	Q8N3X6	602 aa		32.57	■■■□□ 2.8
CISD3-204	ENST00000613478	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	32.57	■■■□□ 2.8
CISD3-204	ENST00000613478	PLSCR1	O15162	318 aa		32.56	■■■□□ 2.8
CISD3-204	ENST00000613478	NKX2-3	Q8TAU0	364 aa		32.56	■■■□□ 2.8
CISD3-204	ENST00000613478	TSPY26P	Q9H489	355 aa		32.56	■■■□□ 2.8
CISD3-204	ENST00000613478	RAI14	Q9P0K7	980 aa		32.56	■■■□□ 2.8
CISD3-204	ENST00000613478	CCDC183	Q5T5S1	534 aa		32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	TBC1D10C	Q8IV04	446 aa		32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	PATL2	C9JE40	543 aa	Known RBP	32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	POLRMT	O00411	1230 aa	Known RBP	32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	LETM1	O95202	739 aa	Predicted RBP	32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	CYP7A1	P22680	504 aa		32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	HIBADH	P31937	336 aa	Known RBP	32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	ST5	P78524	1137 aa		32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	MB21D2	Q8IYB1	491 aa	Predicted RBP	32.55	■■■□□ 2.8
CISD3-204	ENST00000613478	JAK2	O60674	1132 aa		32.54	■■■□□ 2.8
CISD3-204	ENST00000613478	SCRN1	Q12765	414 aa		32.54	■■■□□ 2.8
CISD3-204	ENST00000613478	ESPN	B1AK53	854 aa		32.54	■■■□□ 2.8
CISD3-204	ENST00000613478	HMGB2	P26583	209 aa	Known RBP	32.54	■■■□□ 2.8
CISD3-204	ENST00000613478	IFNL3	Q8IZI9	196 aa		32.54	■■■□□ 2.8
CISD3-204	ENST00000613478	KLHL34	Q8N239	644 aa		32.54	■■■□□ 2.8
CISD3-204	ENST00000613478	RPGR	Q92834	1020 aa	Known RBP	32.54	■■■□□ 2.8
CISD3-204	ENST00000613478	ANKIB1	Q9P2G1	1089 aa		32.54	■■■□□ 2.8
CISD3-204	ENST00000613478	GSG1L2	A8MUP6	293 aa		32.53	■■■□□ 2.8
CISD3-204	ENST00000613478	CRY2	Q49AN0	593 aa		32.53	■■■□□ 2.8
CISD3-204	ENST00000613478	IRS2	Q9Y4H2	1338 aa		32.53	■■■□□ 2.8
CISD3-204	ENST00000613478	ANTXR2	P58335	489 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	CDC37L1	Q7L3B6	337 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	AKT1S1	Q96B36	256 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	PFKFB2	O60825	505 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	KRT85	P78386	507 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	ALX1	Q15699	326 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	COL23A1	Q86Y22	540 aa	Predicted RBP	32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	NCOA7	Q8NI08	942 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	ZNF384	Q8TF68	577 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	INCENP	Q9NQS7	918 aa		32.52	■■■□□ 2.8
CISD3-204	ENST00000613478	PRC1	O43663	620 aa		32.51	■■■□□ 2.8
CISD3-204	ENST00000613478	CLCN1	P35523	988 aa		32.51	■■■□□ 2.8
CISD3-204	ENST00000613478	SLC4A4	Q9Y6R1	1079 aa		32.5	■■■□□ 2.79
CISD3-204	ENST00000613478	MCM5	P33992	734 aa		32.5	■■■□□ 2.79
CISD3-204	ENST00000613478	NAP1L2	Q9ULW6	460 aa	Predicted RBP	32.5	■■■□□ 2.79
CISD3-204	ENST00000613478	JAG2	Q9Y219	1238 aa		32.5	■■■□□ 2.79
CISD3-204	ENST00000613478	CCT2	P78371	535 aa	Known RBP	32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	RALYL	Q86SE5	291 aa	Known RBP	32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	GPR101	Q96P66	508 aa	Predicted RBP	32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	LLPH	Q9BRT6	129 aa	Known RBP	32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	PNPLA7	Q6ZV29	1317 aa		32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	CHAF1A	Q13111	956 aa	Predicted RBP	32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	CACNA1S	Q13698	1873 aa		32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	NAPB	Q9H115	298 aa		32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	NCOA5	Q9HCD5	579 aa	Known RBP	32.49	■■■□□ 2.79
CISD3-204	ENST00000613478	SEMA3E	O15041	775 aa		32.48	■■■□□ 2.79
CISD3-204	ENST00000613478	PDIA3	P30101	505 aa	Known RBP	32.48	■■■□□ 2.79
CISD3-204	ENST00000613478	RGS17	Q9UGC6	210 aa	Predicted RBP	32.48	■■■□□ 2.79
CISD3-204	ENST00000613478	FBXL16	Q8N461	479 aa		32.47	■■■□□ 2.79
CISD3-204	ENST00000613478	PDLIM2	Q96JY6	352 aa		32.47	■■■□□ 2.79
CISD3-204	ENST00000613478	TACC3	Q9Y6A5	838 aa		32.47	■■■□□ 2.79
CISD3-204	ENST00000613478	ELP1	O95163	1332 aa		32.47	■■■□□ 2.79
CISD3-204	ENST00000613478	CTDSPL2	Q05D32	466 aa		32.47	■■■□□ 2.79
CISD3-204	ENST00000613478	DDX11	Q96FC9	970 aa		32.47	■■■□□ 2.79
CISD3-204	ENST00000613478	CTDNEP1	O95476	244 aa		32.46	■■■□□ 2.79
CISD3-204	ENST00000613478	GPSM2	P81274	684 aa		32.46	■■■□□ 2.79
CISD3-204	ENST00000613478	CYB5R4	Q7L1T6	521 aa		32.46	■■■□□ 2.79
CISD3-204	ENST00000613478	MYH13	Q9UKX3	1938 aa		32.46	■■■□□ 2.79
CISD3-204	ENST00000613478	FERMT3	Q86UX7	667 aa		32.46	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms