RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TMEM39BQ9GZU3 492 aa29.77■■■□□ 2.36
MMP28-203ENST00000612672 CCDC57Q2TAC2 916 aa29.76■■■□□ 2.35
MMP28-203ENST00000612672 KAZALD1Q96I82 304 aa29.76■■■□□ 2.35
MMP28-203ENST00000612672 SERPINA10Q9UK55 444 aa29.76■■■□□ 2.35
MMP28-203ENST00000612672 SZT2Q5T011 3432 aa29.76■■■□□ 2.35
MMP28-203ENST00000612672 TCP10L2B9ZVM9 353 aa29.75■■■□□ 2.35
MMP28-203ENST00000612672 VGLL4Q14135 290 aa29.75■■■□□ 2.35
MMP28-203ENST00000612672 DZIP1LQ8IYY4 767 aaKnown RBP29.75■■■□□ 2.35
MMP28-203ENST00000612672 CEP290O15078 2479 aa29.74■■■□□ 2.35
MMP28-203ENST00000612672 TAF7LQ5H9L4 462 aa29.74■■■□□ 2.35
MMP28-203ENST00000612672 OTUD7BQ6GQQ9 843 aa29.74■■■□□ 2.35
MMP28-203ENST00000612672 NCBP3Q53F19 620 aaKnown RBP29.73■■■□□ 2.35
MMP28-203ENST00000612672 FAM43AQ8N2R8 423 aa29.73■■■□□ 2.35
MMP28-203ENST00000612672 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.73■■■□□ 2.35
MMP28-203ENST00000612672 SUCLG2Q96I99 432 aa29.73■■■□□ 2.35
MMP28-203ENST00000612672 HIBADHP31937 336 aaKnown RBP29.72■■■□□ 2.35
MMP28-203ENST00000612672 CRKP46108 304 aa29.72■■■□□ 2.35
MMP28-203ENST00000612672 TNFAIP1Q13829 316 aa29.72■■■□□ 2.35
MMP28-203ENST00000612672 UBE4AQ14139 1066 aa29.72■■■□□ 2.35
MMP28-203ENST00000612672 GCC1Q96CN9 775 aa29.72■■■□□ 2.35
MMP28-203ENST00000612672 ZNF333Q96JL9 665 aa29.72■■■□□ 2.35
MMP28-203ENST00000612672 IQSEC3Q9UPP2 1182 aaPredicted RBP29.72■■■□□ 2.35
MMP28-203ENST00000612672 PTCH2Q9Y6C5 1203 aa29.72■■■□□ 2.35
MMP28-203ENST00000612672 CCL15-CCL14A0A0B4J2E2 113 aa29.71■■■□□ 2.35
MMP28-203ENST00000612672 CACNB3P54284 484 aa29.71■■■□□ 2.35
MMP28-203ENST00000612672 CCL15Q16663 113 aa29.71■■■□□ 2.35
MMP28-203ENST00000612672 TAF1CQ15572 869 aaPredicted RBP29.69■■■□□ 2.34
MMP28-203ENST00000612672 WDR63Q8IWG1 891 aa29.69■■■□□ 2.34
MMP28-203ENST00000612672 OTUD5Q96G74 571 aa29.69■■■□□ 2.34
MMP28-203ENST00000612672 RIPOR2Q9Y4F9 1068 aa29.69■■■□□ 2.34
MMP28-203ENST00000612672 MAP3K9P80192 1104 aa29.68■■■□□ 2.34
MMP28-203ENST00000612672 ARHGAP39Q9C0H5 1083 aa29.68■■■□□ 2.34
MMP28-203ENST00000612672 SNCAIPQ9Y6H5 919 aa29.68■■■□□ 2.34
MMP28-203ENST00000612672 RANBP2P49792 3224 aaKnown RBP29.68■■■□□ 2.34
MMP28-203ENST00000612672 FBXO33Q7Z6M2 555 aa29.67■■■□□ 2.34
MMP28-203ENST00000612672 C9orf78Q9NZ63 289 aaPredicted RBP29.67■■■□□ 2.34
MMP28-203ENST00000612672 NBPF7P0C2Y1 421 aaPredicted RBP29.66■■■□□ 2.34
MMP28-203ENST00000612672 ALDH1L1O75891 902 aa29.65■■■□□ 2.34
MMP28-203ENST00000612672 GTF2A2P52657 109 aa29.65■■■□□ 2.34
MMP28-203ENST00000612672 CHAF1AQ13111 956 aaPredicted RBP29.65■■■□□ 2.34
MMP28-203ENST00000612672 LRRC24Q50LG9 513 aa29.65■■■□□ 2.34
MMP28-203ENST00000612672 SLC4A10Q6U841 1118 aa29.65■■■□□ 2.34
MMP28-203ENST00000612672 MYH13Q9UKX3 1938 aa29.65■■■□□ 2.34
MMP28-203ENST00000612672 SPDYE5A6NIY4 337 aa29.64■■■□□ 2.34
MMP28-203ENST00000612672 ZFYVE28Q9HCC9 887 aa29.64■■■□□ 2.34
MMP28-203ENST00000612672 MYCP01106 439 aaPredicted RBP29.63■■■□□ 2.33
MMP28-203ENST00000612672 FXR1P51114 621 aaKnown RBP eCLIP29.63■■■□□ 2.33
MMP28-203ENST00000612672 VGLL2Q8N8G2 317 aa29.63■■■□□ 2.33
MMP28-203ENST00000612672 SRCIN1Q9C0H9 1055 aa29.63■■■□□ 2.33
MMP28-203ENST00000612672 MRS2Q9HD23 443 aa29.63■■■□□ 2.33
MMP28-203ENST00000612672 TRIOBPQ9H2D6 2365 aa29.63■■■□□ 2.33
MMP28-203ENST00000612672 SLC9C1Q4G0N8 1177 aa29.62■■■□□ 2.33
MMP28-203ENST00000612672 ANKRD44Q8N8A2 993 aa29.62■■■□□ 2.33
MMP28-203ENST00000612672 ZKSCAN4Q969J2 545 aaPredicted RBP29.62■■■□□ 2.33
MMP28-203ENST00000612672 BICC1Q9H694 974 aaKnown RBP29.62■■■□□ 2.33
MMP28-203ENST00000612672 CSADQ9Y600 493 aa29.62■■■□□ 2.33
MMP28-203ENST00000612672 TNNI2P48788 182 aa29.61■■■□□ 2.33
MMP28-203ENST00000612672 SH3TC2Q8TF17 1288 aa29.61■■■□□ 2.33
MMP28-203ENST00000612672 UTYO14607 1347 aa29.61■■■□□ 2.33
MMP28-203ENST00000612672 MROH5Q6ZUA9 1318 aa29.61■■■□□ 2.33
MMP28-203ENST00000612672 BTBD19C9JJ37 291 aa29.6■■■□□ 2.33
MMP28-203ENST00000612672 TMEM106CQ9BVX2 250 aa29.6■■■□□ 2.33
MMP28-203ENST00000612672 CTGFP29279 349 aa29.59■■■□□ 2.33
MMP28-203ENST00000612672 RABL6Q3YEC7 729 aaPredicted RBP29.59■■■□□ 2.33
MMP28-203ENST00000612672 APOBEC3HQ6NTF7 200 aaKnown RBP29.59■■■□□ 2.33
MMP28-203ENST00000612672 KLHDC4Q8TBB5 520 aa29.59■■■□□ 2.33
MMP28-203ENST00000612672 WRNIP1Q96S55 665 aa29.59■■■□□ 2.33
MMP28-203ENST00000612672 IRF6O14896 467 aa29.58■■■□□ 2.33
MMP28-203ENST00000612672 BCAMP50895 628 aa29.58■■■□□ 2.33
MMP28-203ENST00000612672 HDLBPQ00341 1268 aaKnown RBP29.58■■■□□ 2.33
MMP28-203ENST00000612672 TLR2O60603 784 aa29.57■■■□□ 2.32
MMP28-203ENST00000612672 ECM2O94769 699 aaPredicted RBP29.57■■■□□ 2.32
MMP28-203ENST00000612672 LACTBP83111 547 aaPredicted RBP29.57■■■□□ 2.32
MMP28-203ENST00000612672 TEKT1Q969V4 418 aa29.57■■■□□ 2.32
MMP28-203ENST00000612672 COLQQ9Y215 455 aaPredicted RBP29.57■■■□□ 2.32
MMP28-203ENST00000612672 METTL24Q5JXM2 366 aa29.56■■■□□ 2.32
MMP28-203ENST00000612672 ERO1BQ86YB8 467 aa29.56■■■□□ 2.32
MMP28-203ENST00000612672 ZDHHC15Q96MV8 337 aa29.56■■■□□ 2.32
MMP28-203ENST00000612672 SLC4A8Q2Y0W8 1093 aa29.55■■■□□ 2.32
MMP28-203ENST00000612672 VPS37DQ86XT2 251 aa29.55■■■□□ 2.32
MMP28-203ENST00000612672 RPAP1Q9BWH6 1393 aaPredicted RBP29.54■■■□□ 2.32
MMP28-203ENST00000612672 PDE8BO95263 885 aa29.54■■■□□ 2.32
MMP28-203ENST00000612672 CETPP11597 493 aa29.54■■■□□ 2.32
MMP28-203ENST00000612672 FAM83AQ86UY5 434 aa29.54■■■□□ 2.32
MMP28-203ENST00000612672 TBC1D22AQ8WUA7 517 aa29.54■■■□□ 2.32
MMP28-203ENST00000612672 INPP5BP32019 993 aa29.53■■■□□ 2.32
MMP28-203ENST00000612672 PPIL2Q13356 520 aa29.53■■■□□ 2.32
MMP28-203ENST00000612672 NBPF11Q86T75 865 aa29.53■■■□□ 2.32
MMP28-203ENST00000612672 SHISA4Q96DD7 197 aa29.53■■■□□ 2.32
MMP28-203ENST00000612672 ADGRA2Q96PE1 1338 aa29.52■■■□□ 2.32
MMP28-203ENST00000612672 AK9Q5TCS8 1911 aa29.52■■■□□ 2.32
MMP28-203ENST00000612672 FGFR2P21802 821 aa29.52■■■□□ 2.32
MMP28-203ENST00000612672 MIGA2Q7L4E1 593 aa29.52■■■□□ 2.32
MMP28-203ENST00000612672 FRAT2O75474 233 aaPredicted RBP29.51■■■□□ 2.31
MMP28-203ENST00000612672 SNAPC2Q13487 334 aa29.51■■■□□ 2.31
MMP28-203ENST00000612672 MTFR1Q15390 333 aa29.51■■■□□ 2.31
MMP28-203ENST00000612672 CAVIN4Q5BKX8 364 aa29.51■■■□□ 2.31
MMP28-203ENST00000612672 ZCCHC17Q9NP64 241 aaKnown RBP29.51■■■□□ 2.31
MMP28-203ENST00000612672 MGAMO43451 1857 aa29.51■■■□□ 2.31
MMP28-203ENST00000612672 H0YGN5 161 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms