RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 ABCF2Q9UG63 623 aa23.48■■□□□ 1.35
SRRM3-205ENST00000612155 RAD17O75943 681 aa23.47■■□□□ 1.35
SRRM3-205ENST00000612155 CUL4AQ13619 759 aa23.47■■□□□ 1.35
SRRM3-205ENST00000612155 GRIK5Q16478 980 aa23.47■■□□□ 1.35
SRRM3-205ENST00000612155 CLEC17AQ6ZS10 378 aa23.47■■□□□ 1.35
SRRM3-205ENST00000612155 NOL8Q76FK4 1167 aaKnown RBP23.47■■□□□ 1.35
SRRM3-205ENST00000612155 ZDHHC9Q9Y397 364 aa23.47■■□□□ 1.35
SRRM3-205ENST00000612155 A0A0D9SFI3 127 aa23.47■■□□□ 1.35
SRRM3-205ENST00000612155 KIAA1211Q6ZU35 1233 aa23.47■■□□□ 1.35
SRRM3-205ENST00000612155 RUFY2Q8WXA3 655 aa23.47■■□□□ 1.35
SRRM3-205ENST00000612155 DENND2AQ9ULE3 1009 aa23.46■■□□□ 1.35
SRRM3-205ENST00000612155 DDX11L8A8MPP1 907 aa23.45■■□□□ 1.35
SRRM3-205ENST00000612155 NIM1KQ8IY84 436 aa23.45■■□□□ 1.35
SRRM3-205ENST00000612155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.45■■□□□ 1.35
SRRM3-205ENST00000612155 TTC14Q96N46 770 aa23.45■■□□□ 1.35
SRRM3-205ENST00000612155 CWC22Q9HCG8 908 aaKnown RBP23.45■■□□□ 1.35
SRRM3-205ENST00000612155 LTBP3Q9NS15 1303 aa23.45■■□□□ 1.34
SRRM3-205ENST00000612155 MCM2P49736 904 aa23.45■■□□□ 1.34
SRRM3-205ENST00000612155 TTLL5Q6EMB2 1281 aa23.45■■□□□ 1.34
SRRM3-205ENST00000612155 KCNB2Q92953 911 aa23.45■■□□□ 1.34
SRRM3-205ENST00000612155 PODNQ7Z5L7 613 aa23.44■■□□□ 1.34
SRRM3-205ENST00000612155 GBP4Q96PP9 640 aa23.44■■□□□ 1.34
SRRM3-205ENST00000612155 FSD1Q9BTV5 496 aa23.44■■□□□ 1.34
SRRM3-205ENST00000612155 CCDC171Q6TFL3 1326 aa23.44■■□□□ 1.34
SRRM3-205ENST00000612155 IDH1O75874 414 aaKnown RBP23.44■■□□□ 1.34
SRRM3-205ENST00000612155 PRDX5P30044 214 aa23.44■■□□□ 1.34
SRRM3-205ENST00000612155 JDP2Q8WYK2 163 aa23.44■■□□□ 1.34
SRRM3-205ENST00000612155 SBF1O95248 1867 aa23.43■■□□□ 1.34
SRRM3-205ENST00000612155 BAG4O95429 457 aaKnown RBP23.43■■□□□ 1.34
SRRM3-205ENST00000612155 CPA1P15085 419 aa23.43■■□□□ 1.34
SRRM3-205ENST00000612155 NECTIN1Q15223 517 aa23.43■■□□□ 1.34
SRRM3-205ENST00000612155 LMNB1P20700 586 aa23.42■■□□□ 1.34
SRRM3-205ENST00000612155 CERS5Q8N5B7 392 aa23.42■■□□□ 1.34
SRRM3-205ENST00000612155 RNF181Q9P0P0 153 aa23.42■■□□□ 1.34
SRRM3-205ENST00000612155 F8W031 263 aaPredicted RBP23.42■■□□□ 1.34
SRRM3-205ENST00000612155 NUCB2P80303 420 aa23.42■■□□□ 1.34
SRRM3-205ENST00000612155 ADCK5Q3MIX3 580 aa23.42■■□□□ 1.34
SRRM3-205ENST00000612155 MFSD14BQ5SR56 506 aa23.42■■□□□ 1.34
SRRM3-205ENST00000612155 GZF1Q9H116 711 aaPredicted RBP23.42■■□□□ 1.34
SRRM3-205ENST00000612155 ZNRF3Q9ULT6 936 aa23.42■■□□□ 1.34
SRRM3-205ENST00000612155 SEMA3EO15041 775 aa23.41■■□□□ 1.34
SRRM3-205ENST00000612155 COL9A3Q14050 684 aaPredicted RBP23.41■■□□□ 1.34
SRRM3-205ENST00000612155 ZNF589Q86UQ0 364 aaPredicted RBP23.41■■□□□ 1.34
SRRM3-205ENST00000612155 HIP1O00291 1037 aa23.41■■□□□ 1.34
SRRM3-205ENST00000612155 MAP4K1Q92918 833 aa23.41■■□□□ 1.34
SRRM3-205ENST00000612155 LRP2BPQ9P2M1 347 aa23.41■■□□□ 1.34
SRRM3-205ENST00000612155 ZBTB12Q9Y330 459 aaPredicted RBP23.41■■□□□ 1.34
SRRM3-205ENST00000612155 PSMD14O00487 310 aa23.4■■□□□ 1.34
SRRM3-205ENST00000612155 C9orf131Q5VYM1 1079 aa23.4■■□□□ 1.34
SRRM3-205ENST00000612155 RBM8AQ9Y5S9 174 aaKnown RBP23.4■■□□□ 1.34
SRRM3-205ENST00000612155 CXCL9Q07325 125 aa23.4■■□□□ 1.34
SRRM3-205ENST00000612155 KBTBD3Q8NAB2 608 aa23.4■■□□□ 1.34
SRRM3-205ENST00000612155 VPS33BQ9H267 617 aa23.4■■□□□ 1.34
SRRM3-205ENST00000612155 RAI14Q9P0K7 980 aa23.4■■□□□ 1.34
SRRM3-205ENST00000612155 USP17L3A6NCW0 530 aa23.39■■□□□ 1.33
SRRM3-205ENST00000612155 USP17L4A6NCW7 530 aa23.39■■□□□ 1.33
SRRM3-205ENST00000612155 USP17L1Q7RTZ2 530 aa23.39■■□□□ 1.33
SRRM3-205ENST00000612155 LARP6Q9BRS8 491 aaKnown RBP23.39■■□□□ 1.33
SRRM3-205ENST00000612155 GRIN3BO60391 1043 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 AK2P54819 239 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 DACT2Q5SW24 774 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 RUFY3Q7L099 469 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 ZNF384Q8TF68 577 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 TAF6LQ9Y6J9 622 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 FAM205AQ6ZU69 1335 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 ZNF541Q9H0D2 1346 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 CREB3L3Q68CJ9 461 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 WDR66Q8TBY9 1149 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 CHAMP1Q96JM3 812 aa23.38■■□□□ 1.33
SRRM3-205ENST00000612155 INTS4Q96HW7 963 aaKnown RBP23.37■■□□□ 1.33
SRRM3-205ENST00000612155 CASTP20810 708 aaKnown RBP23.37■■□□□ 1.33
SRRM3-205ENST00000612155 SLC9C2Q5TAH2 1124 aa23.37■■□□□ 1.33
SRRM3-205ENST00000612155 STRIP1Q5VSL9 837 aa23.37■■□□□ 1.33
SRRM3-205ENST00000612155 KIAA0825Q8IV33 1275 aa23.37■■□□□ 1.33
SRRM3-205ENST00000612155 MAGEB6Q8N7X4 407 aa23.37■■□□□ 1.33
SRRM3-205ENST00000612155 SEC62Q99442 399 aaKnown RBP23.37■■□□□ 1.33
SRRM3-205ENST00000612155 GJA3Q9Y6H8 435 aa23.37■■□□□ 1.33
SRRM3-205ENST00000612155 ZNF646O15015 1829 aaPredicted RBP23.36■■□□□ 1.33
SRRM3-205ENST00000612155 TTF1Q15361 905 aaPredicted RBP23.36■■□□□ 1.33
SRRM3-205ENST00000612155 DIXDC1Q155Q3 683 aa23.36■■□□□ 1.33
SRRM3-205ENST00000612155 FZD9O00144 591 aa23.35■■□□□ 1.33
SRRM3-205ENST00000612155 SLC27A2O14975 620 aa23.35■■□□□ 1.33
SRRM3-205ENST00000612155 SCNN1DP51172 638 aa23.35■■□□□ 1.33
SRRM3-205ENST00000612155 MECOMQ03112 1051 aa23.35■■□□□ 1.33
SRRM3-205ENST00000612155 JAKMIP1Q96N16 626 aaKnown RBP23.35■■□□□ 1.33
SRRM3-205ENST00000612155 ZSWIM6Q9HCJ5 1215 aa23.35■■□□□ 1.33
SRRM3-205ENST00000612155 LDHBP07195 334 aaKnown RBP23.35■■□□□ 1.33
SRRM3-205ENST00000612155 ADGRA1Q86SQ6 560 aa23.35■■□□□ 1.33
SRRM3-205ENST00000612155 PDS5AQ29RF7 1337 aaKnown RBP23.35■■□□□ 1.33
SRRM3-205ENST00000612155 SHTN1A0MZ66 631 aa23.34■■□□□ 1.33
SRRM3-205ENST00000612155 CIAPIN1Q6FI81 312 aa23.34■■□□□ 1.33
SRRM3-205ENST00000612155 TM6SF1Q9BZW5 370 aa23.34■■□□□ 1.33
SRRM3-205ENST00000612155 DICER1Q9UPY3 1922 aaKnown RBP23.34■■□□□ 1.33
SRRM3-205ENST00000612155 LARGE1O95461 756 aa23.34■■□□□ 1.33
SRRM3-205ENST00000612155 PDE6AP16499 860 aa23.34■■□□□ 1.33
SRRM3-205ENST00000612155 CCDC129Q6ZRS4 1044 aa23.34■■□□□ 1.33
SRRM3-205ENST00000612155 PCDHAC2Q9Y5I4 1007 aa23.34■■□□□ 1.33
SRRM3-205ENST00000612155 DOCK2Q92608 1830 aa23.34■■□□□ 1.33
SRRM3-205ENST00000612155 MAP3K12Q12852 859 aa23.33■■□□□ 1.33
SRRM3-205ENST00000612155 NSUN4Q96CB9 384 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms