RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 M0R2C6 588 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 PI16Q6UXB8 463 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 TDRD7Q8NHU6 1098 aaKnown RBP9.98□□□□□ -0.81
LIG4-204ENST00000611712 ESR2Q92731 530 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 ACSBG1Q96GR2 724 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 TMEM87BQ96K49 555 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 BCL2L12Q9HB09 334 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 BTG4Q9NY30 223 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 NIP7Q9Y221 180 aaKnown RBP eCLIP9.98□□□□□ -0.81
LIG4-204ENST00000611712 AFMP43652 599 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 NLRP5P59047 1200 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 PGBD1Q96JS3 809 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 ARMT1Q9H993 441 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
LIG4-204ENST00000611712 KIAA1468Q9P260 1216 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 VIRMAQ69YN4 1812 aaKnown RBP9.98□□□□□ -0.81
LIG4-204ENST00000611712 PDE8AO60658 829 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 PUM3Q15397 648 aaKnown RBP9.98□□□□□ -0.81
LIG4-204ENST00000611712 FBXO18Q8NFZ0 1043 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 KAZALD1Q96I82 304 aa9.98□□□□□ -0.81
LIG4-204ENST00000611712 UTP14AQ9BVJ6 771 aaKnown RBP9.98□□□□□ -0.81
LIG4-204ENST00000611712 CIAO1O76071 339 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 PCCAP05165 728 aaPredicted RBP9.97□□□□□ -0.81
LIG4-204ENST00000611712 MYL5Q02045 173 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 ARHGAP29Q52LW3 1261 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 KANK3Q6NY19 840 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 TMCO3Q6UWJ1 677 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 KRI1Q8N9T8 703 aaKnown RBP9.97□□□□□ -0.81
LIG4-204ENST00000611712 ZBTB38Q8NAP3 1195 aaPredicted RBP9.97□□□□□ -0.81
LIG4-204ENST00000611712 CLIC4Q9Y696 253 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 HEG1Q9ULI3 1381 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 SLU7O95391 586 aaKnown RBP9.97□□□□□ -0.81
LIG4-204ENST00000611712 NDUFA8P51970 172 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 GNG11P61952 73 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 PDIA6Q15084 440 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 SPECC1Q5M775 1068 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 SYT10Q6XYQ8 523 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 C11orf57Q6ZUT1 292 aaPredicted RBP9.97□□□□□ -0.81
LIG4-204ENST00000611712 RIMBP3CA6NJZ7 1639 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 RIMBP3BA6NNM3 1639 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 CASQ1P31415 396 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 CTDSPL2Q05D32 466 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 STIM1Q13586 685 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 SLC4A8Q2Y0W8 1093 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 RIMBP3Q9UFD9 1639 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 KCNH3Q9ULD8 1083 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 CARMIL3Q8ND23 1372 aa9.97□□□□□ -0.81
LIG4-204ENST00000611712 TSGA10IPQ3SY00 556 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 GREM2Q9H772 168 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 ZHX1Q9UKY1 873 aaPredicted RBP9.96□□□□□ -0.81
LIG4-204ENST00000611712 TRIM75PA6NK02 468 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 GNAT2P19087 354 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 USP5P45974 858 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 FANCCQ00597 558 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 IFIT1BQ5T764 474 aaKnown RBP9.96□□□□□ -0.81
LIG4-204ENST00000611712 CCDC70Q6NSX1 233 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 CACTINQ8WUQ7 758 aaKnown RBP9.96□□□□□ -0.81
LIG4-204ENST00000611712 LPIN2Q92539 896 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 DHX58Q96C10 678 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 XPO4Q9C0E2 1151 aaKnown RBP9.96□□□□□ -0.81
LIG4-204ENST00000611712 MKNK2Q9HBH9 465 aa9.96□□□□□ -0.81
LIG4-204ENST00000611712 PFKFB1P16118 471 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 CTSWP56202 376 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 NLRP12P59046 1061 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 DZIP1Q86YF9 867 aaKnown RBP9.96□□□□□ -0.82
LIG4-204ENST00000611712 ANKRD18AQ8IVF6 992 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 DIS3L2Q8IYB7 885 aaKnown RBP9.96□□□□□ -0.82
LIG4-204ENST00000611712 MRFAP1L1Q96HT8 127 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 PUS7LQ9H0K6 701 aaKnown RBP9.96□□□□□ -0.82
LIG4-204ENST00000611712 RTEL1Q9NZ71 1219 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 PDE6AP16499 860 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 HSP90B2PQ58FF3 399 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 FBXO3Q9UK99 471 aa9.96□□□□□ -0.82
LIG4-204ENST00000611712 MAGEB6P1A0A0J9YX57 407 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 TSPY2A6NKD2 308 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 RABL6Q3YEC7 729 aaPredicted RBP9.95□□□□□ -0.82
LIG4-204ENST00000611712 LRRC8AQ8IWT6 810 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 SLAIN2Q9P270 581 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 NBPF26B4DH59 902 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 U2AF2P26368 475 aaKnown RBP eCLIP9.95□□□□□ -0.82
LIG4-204ENST00000611712 NBPF14Q5TI25 921 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 NBPF10Q6P3W6 841 aaKnown RBP9.95□□□□□ -0.82
LIG4-204ENST00000611712 STOX1Q6ZVD7 989 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 NBPF15Q8N660 670 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 SPATA5Q8NB90 893 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 CABP5Q9NP86 173 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 ATG3Q9NT62 314 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 ZNHIT6Q9NWK9 470 aaKnown RBP9.95□□□□□ -0.82
LIG4-204ENST00000611712 WDR17Q8IZU2 1322 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 PHKA1P46020 1223 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 CAGE1Q8TC20 777 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 CDK5RAP3Q96JB5 506 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
LIG4-204ENST00000611712 KCNJ14Q9UNX9 436 aa9.95□□□□□ -0.82
LIG4-204ENST00000611712 UTYO14607 1347 aa9.94□□□□□ -0.82
LIG4-204ENST00000611712 KIF5CO60282 957 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms