RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 ZNF76P36508 570 aa14.17□□□□□ -0.14
CDH1-212ENST00000611625 FANCCQ00597 558 aa14.17□□□□□ -0.14
CDH1-212ENST00000611625 ENOX2Q16206 610 aaKnown RBP14.17□□□□□ -0.14
CDH1-212ENST00000611625 DZIP3Q86Y13 1208 aaKnown RBP14.17□□□□□ -0.14
CDH1-212ENST00000611625 GOLGA1Q92805 767 aa14.17□□□□□ -0.14
CDH1-212ENST00000611625 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
CDH1-212ENST00000611625 A1BGP04217 495 aa14.17□□□□□ -0.14
CDH1-212ENST00000611625 LDHCP07864 332 aa14.17□□□□□ -0.14
CDH1-212ENST00000611625 ALS2CR12Q96Q35 445 aa14.17□□□□□ -0.14
CDH1-212ENST00000611625 SEC62Q99442 399 aaKnown RBP14.17□□□□□ -0.14
CDH1-212ENST00000611625 MPHOSPH10O00566 681 aaKnown RBP14.17□□□□□ -0.14
CDH1-212ENST00000611625 ADAMTS2O95450 1211 aa14.17□□□□□ -0.14
CDH1-212ENST00000611625 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
CDH1-212ENST00000611625 BAG3O95817 575 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 MCM6Q14566 821 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 RILPL1Q5EBL4 403 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 BAG1Q99933 345 aaPredicted RBP14.16□□□□□ -0.14
CDH1-212ENST00000611625 BCL2L12Q9HB09 334 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 JADE2Q9NQC1 790 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 MAGEB6P1A0A0J9YX57 407 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 SHTN1A0MZ66 631 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 U2AF2P26368 475 aaKnown RBP eCLIP14.16□□□□□ -0.14
CDH1-212ENST00000611625 SPTY2D1Q68D10 685 aaPredicted RBP14.16□□□□□ -0.14
CDH1-212ENST00000611625 USP28Q96RU2 1077 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 VAT1LQ9HCJ6 419 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 EXOC1Q9NV70 894 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 IMPACTQ9P2X3 320 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 PNPLA6Q8IY17 1366 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 PSMA7O14818 248 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 KIF20AO95235 890 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 CYLC1P35663 651 aaPredicted RBP14.16□□□□□ -0.14
CDH1-212ENST00000611625 KRT2P35908 639 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 LZTFL1Q9NQ48 299 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 NSFL1CQ9UNZ2 370 aaKnown RBP14.16□□□□□ -0.14
CDH1-212ENST00000611625 ARHGAP31Q2M1Z3 1444 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 CALM1P0DP23 149 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 CALM2P0DP24 149 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 CALM3P0DP25 149 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 CCDC96Q2M329 555 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 PROSER3Q2NL68 480 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 CEP112Q8N8E3 955 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 ZKSCAN3Q9BRR0 538 aa14.16□□□□□ -0.14
CDH1-212ENST00000611625 CTAGE9A4FU28 777 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 AKR1B10O60218 316 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 NLRP12P59046 1061 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 CCDC40Q4G0X9 1142 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
CDH1-212ENST00000611625 PFKFB2O60825 505 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 LRMPQ12912 555 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 ITGA6P23229 1130 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 TIGD1Q96MW7 591 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 NIP7Q9Y221 180 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDH1-212ENST00000611625 TAF5LO75529 589 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 GNAQP50148 359 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 CTR9Q6PD62 1173 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 VPS36Q86VN1 386 aa14.15□□□□□ -0.14
CDH1-212ENST00000611625 QRICH2Q9H0J4 1663 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 CUTAO60888 179 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 KRT40Q6A162 431 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 CABP5Q9NP86 173 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 CKAP4Q07065 602 aaKnown RBP14.14□□□□□ -0.15
CDH1-212ENST00000611625 CCDC178Q5BJE1 867 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 MYSM1Q5VVJ2 828 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 ZNF274Q96GC6 653 aaPredicted RBP14.14□□□□□ -0.15
CDH1-212ENST00000611625 HAUS7Q99871 368 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 UBA5Q9GZZ9 404 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 ADGRB3O60242 1522 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 LRRC7Q96NW7 1537 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 SETBP1Q9Y6X0 1596 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 CALML3P27482 149 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 ADALQ6DHV7 355 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 DIS3L2Q8IYB7 885 aaKnown RBP14.14□□□□□ -0.15
CDH1-212ENST00000611625 COPRSQ9NQ92 184 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 USP8P40818 1118 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 ZAP70P43403 619 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 IQUBQ8NA54 791 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 KIF2CQ99661 725 aa14.14□□□□□ -0.15
CDH1-212ENST00000611625 TLR7Q9NYK1 1049 aaKnown RBP14.14□□□□□ -0.15
CDH1-212ENST00000611625 EVCP57679 992 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 SLF2Q8IX21 1173 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 CRACR2BQ8N4Y2 399 aaPredicted RBP14.13□□□□□ -0.15
CDH1-212ENST00000611625 DEXIO95424 95 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 ELF2Q15723 593 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 PI4K2BQ8TCG2 481 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDH1-212ENST00000611625 PLEKHG1Q9ULL1 1385 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 AKR1B15C9JRZ8 316 aaPredicted RBP14.13□□□□□ -0.15
CDH1-212ENST00000611625 POLA2Q14181 598 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 ZNF569Q5MCW4 686 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 PHKBQ93100 1093 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 MED14O60244 1454 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 ERBB4Q15303 1308 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 HEATR3Q7Z4Q2 680 aa14.13□□□□□ -0.15
CDH1-212ENST00000611625 DBNLQ9UJU6 430 aaKnown RBP14.13□□□□□ -0.15
CDH1-212ENST00000611625 TSPY3P0CV98 308 aa14.12□□□□□ -0.15
CDH1-212ENST00000611625 TSPY8P0CW00 308 aa14.12□□□□□ -0.15
CDH1-212ENST00000611625 ATP6V1AP38606 617 aa14.12□□□□□ -0.15
CDH1-212ENST00000611625 MATR3P43243 847 aaKnown RBP eCLIP14.12□□□□□ -0.15
CDH1-212ENST00000611625 CNGA4Q8IV77 575 aa14.12□□□□□ -0.15
CDH1-212ENST00000611625 NAA15Q9BXJ9 866 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms