RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.88□□□□□ -0.99
CBWD1-219ENST00000611457 FAM151AQ8WW52 585 aa8.88□□□□□ -0.99
CBWD1-219ENST00000611457 IRF6O14896 467 aa8.88□□□□□ -0.99
CBWD1-219ENST00000611457 EPS15P42566 896 aa8.88□□□□□ -0.99
CBWD1-219ENST00000611457 FAM9BQ8IZU0 186 aa8.88□□□□□ -0.99
CBWD1-219ENST00000611457 GTF3C2Q8WUA4 911 aaPredicted RBP8.88□□□□□ -0.99
CBWD1-219ENST00000611457 CDCA5Q96FF9 252 aa8.88□□□□□ -0.99
CBWD1-219ENST00000611457 C12orf42Q96LP6 360 aa8.88□□□□□ -0.99
CBWD1-219ENST00000611457 OSBPL5Q9H0X9 879 aaPredicted RBP8.88□□□□□ -0.99
CBWD1-219ENST00000611457 COL4A6Q14031 1691 aa8.88□□□□□ -0.99
CBWD1-219ENST00000611457 WNT10BO00744 389 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 ALDH1A1P00352 501 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 DCTPP1Q9H773 170 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 GNL3LQ9NVN8 582 aaKnown RBP8.87□□□□□ -0.99
CBWD1-219ENST00000611457 WDR33Q9C0J8 1336 aaKnown RBP8.87□□□□□ -0.99
CBWD1-219ENST00000611457 F6X3S4 739 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 NOGQ13253 232 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 APOBEC3HQ6NTF7 200 aaKnown RBP8.87□□□□□ -0.99
CBWD1-219ENST00000611457 LDHAL6AQ6ZMR3 332 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.87□□□□□ -0.99
CBWD1-219ENST00000611457 CAVIN4Q5BKX8 364 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 OLFM4Q6UX06 510 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 TMEM57Q8N5G2 664 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 MEIS3Q99687 375 aa8.87□□□□□ -0.99
CBWD1-219ENST00000611457 FMR1Q06787 632 aaKnown RBP eCLIP8.86□□□□□ -0.99
CBWD1-219ENST00000611457 MOGSQ13724 837 aa8.86□□□□□ -0.99
CBWD1-219ENST00000611457 TXNRD3Q86VQ6 643 aa8.86□□□□□ -0.99
CBWD1-219ENST00000611457 UBE2Q2Q8WVN8 375 aa8.86□□□□□ -0.99
CBWD1-219ENST00000611457 PLCG2P16885 1265 aa8.86□□□□□ -0.99
CBWD1-219ENST00000611457 ATP5JP18859 108 aa8.86□□□□□ -0.99
CBWD1-219ENST00000611457 TCRBV5S4A2TA0A5A2 114 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 FGRP09769 529 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 HSPA8P11142 646 aaKnown RBP8.85□□□□□ -0.99
CBWD1-219ENST00000611457 PPIL2Q13356 520 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 SCARF1Q14162 830 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 NBR1Q14596 966 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 TNNI3KQ59H18 835 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 SALL2Q9Y467 1007 aaPredicted RBP8.85□□□□□ -0.99
CBWD1-219ENST00000611457 LRRFIP2Q9Y608 721 aaKnown RBP8.85□□□□□ -0.99
CBWD1-219ENST00000611457 FPGT-TNNI3KV9GXZ4 949 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 MANSC4A6NHS7 340 aaPredicted RBP8.85□□□□□ -0.99
CBWD1-219ENST00000611457 RHBDL3P58872 404 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 TTF1Q15361 905 aaPredicted RBP8.85□□□□□ -0.99
CBWD1-219ENST00000611457 ATP2B3Q16720 1220 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 RGMBQ6NW40 437 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 ZNF70Q9UC06 446 aaPredicted RBP8.85□□□□□ -0.99
CBWD1-219ENST00000611457 MYPNQ86TC9 1320 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 SPDYE5A6NIY4 337 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 PHF20L1A8MW92 1017 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 SUPT20HL1Q3ZLR7 823 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 ANKRD23Q86SG2 305 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 WDR18Q9BV38 432 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 PPP4R2Q9NY27 417 aa8.85□□□□□ -0.99
CBWD1-219ENST00000611457 NSFL1CQ9UNZ2 370 aaKnown RBP8.85□□□□□ -0.99
CBWD1-219ENST00000611457 ALPK3Q96L96 1907 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 EPB41L2O43491 1005 aaKnown RBP8.84□□□□□ -0.99
CBWD1-219ENST00000611457 TNNI2P48788 182 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 LRRC24Q50LG9 513 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 SIRT2Q8IXJ6 389 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 ANKIB1Q9P2G1 1089 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 HERC5Q9UII4 1024 aaKnown RBP8.84□□□□□ -0.99
CBWD1-219ENST00000611457 RCAN3Q9UKA8 241 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 CTCFP49711 727 aaPredicted RBP8.84□□□□□ -0.99
CBWD1-219ENST00000611457 TTLL5Q6EMB2 1281 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 TATDN1Q6P1N9 297 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 DCPSQ96C86 337 aaKnown RBP8.84□□□□□ -0.99
CBWD1-219ENST00000611457 IL17RAQ96F46 866 aa8.84□□□□□ -0.99
CBWD1-219ENST00000611457 DHX36Q9H2U1 1008 aaKnown RBP8.84□□□□□ -0.99
CBWD1-219ENST00000611457 GBA2Q9HCG7 927 aaPredicted RBP8.84□□□□□ -0.99
CBWD1-219ENST00000611457 HMMRO75330 724 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 KLRK1P26718 216 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 CRKP46108 304 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 PPATQ06203 517 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 CNGB1Q14028 1251 aaPredicted RBP8.83□□□□□ -1
CBWD1-219ENST00000611457 SBK1Q52WX2 424 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 ZNF384Q8TF68 577 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 KIF1BPQ96EK5 621 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 CXCL11O14625 94 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 LDHCP07864 332 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 RLBP1P12271 317 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 NKX3-2P78367 333 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 SREBF2Q12772 1141 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 CCDC102BQ68D86 513 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 NSUN4Q96CB9 384 aaKnown RBP8.83□□□□□ -1
CBWD1-219ENST00000611457 GCC1Q96CN9 775 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 HAUS7Q99871 368 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 PUS3Q9BZE2 481 aaKnown RBP8.83□□□□□ -1
CBWD1-219ENST00000611457 CEP126Q9P2H0 1117 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 SMC5Q8IY18 1101 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 TEKT1Q969V4 418 aa8.83□□□□□ -1
CBWD1-219ENST00000611457 UBE3CQ15386 1083 aa8.82□□□□□ -1
CBWD1-219ENST00000611457 IL27Q8NEV9 243 aa8.82□□□□□ -1
CBWD1-219ENST00000611457 BAZ2AQ9UIF9 1905 aaKnown RBP8.82□□□□□ -1
CBWD1-219ENST00000611457 PLA2G6O60733 806 aa8.82□□□□□ -1
CBWD1-219ENST00000611457 USP2O75604 605 aaPredicted RBP8.82□□□□□ -1
CBWD1-219ENST00000611457 GABPAQ06546 454 aa8.82□□□□□ -1
CBWD1-219ENST00000611457 ALX1Q15699 326 aa8.82□□□□□ -1
CBWD1-219ENST00000611457 DEFB115Q30KQ5 88 aa8.82□□□□□ -1
CBWD1-219ENST00000611457 WNK4Q96J92 1243 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms