RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
PABPC1-224ENST00000610907 CCDC73Q6ZRK6 1079 aa12.2□□□□□ -0.46
PABPC1-224ENST00000610907 AIDAQ96BJ3 306 aa12.2□□□□□ -0.46
PABPC1-224ENST00000610907 MTA3Q9BTC8 594 aa12.2□□□□□ -0.46
PABPC1-224ENST00000610907 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.2□□□□□ -0.462e-24■■■■■ 29.8
PABPC1-224ENST00000610907 SPATA31A5Q5VU36 1347 aa12.2□□□□□ -0.46
PABPC1-224ENST00000610907 SPATA31A7Q8IWB4 1347 aa12.2□□□□□ -0.46
PABPC1-224ENST00000610907 A0A1W2PQ27 194 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 A0A1W2PQ64 194 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 A0A1W2PQD8 194 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 YEATS4O95619 227 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 APPP05067 770 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 ADALQ6DHV7 355 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 POTEDQ86YR6 584 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 CCAR1Q8IX12 1150 aaKnown RBP12.19□□□□□ -0.46
PABPC1-224ENST00000610907 MARCH10Q8NA82 808 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-224ENST00000610907 TDRD7Q8NHU6 1098 aaKnown RBP12.19□□□□□ -0.46
PABPC1-224ENST00000610907 KCNG4Q8TDN1 519 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 USP28Q96RU2 1077 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 CDC5LQ99459 802 aaKnown RBP12.19□□□□□ -0.46
PABPC1-224ENST00000610907 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-224ENST00000610907 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-224ENST00000610907 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
PABPC1-224ENST00000610907 SH2B2O14492 632 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-224ENST00000610907 NTSR2O95665 410 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 LIFRP42702 1097 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 ANO6Q4KMQ2 910 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-224ENST00000610907 SGMS1Q86VZ5 419 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 CKAP2LQ8IYA6 745 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 ENGASEQ8NFI3 743 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 PIBF1Q8WXW3 757 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 DOCK2Q92608 1830 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 LAMB2P55268 1798 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 SLIT2O94813 1529 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 PNPLA7Q6ZV29 1317 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
PABPC1-224ENST00000610907 NACAP1Q9BZK3 213 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 KRT23Q9C075 422 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 CBX8Q9HC52 389 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-224ENST00000610907 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
PABPC1-224ENST00000610907 NIP7Q9Y221 180 aaKnown RBP eCLIP12.18□□□□□ -0.46
PABPC1-224ENST00000610907 ME1P48163 572 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 ZNF165P49910 485 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 METAP2P50579 478 aaKnown RBP eCLIP12.17□□□□□ -0.461e-10■■■□□ 18
PABPC1-224ENST00000610907 ITPK1Q13572 414 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 SNW1Q13573 536 aaKnown RBP12.17□□□□□ -0.46
PABPC1-224ENST00000610907 RASGRF1Q13972 1273 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 SYNE3Q6ZMZ3 975 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 TBC1D10CQ8IV04 446 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 IFNL3Q8IZI9 196 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 LINC00301Q8NCQ3 95 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-224ENST00000610907 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 MRPS27Q92552 414 aaKnown RBP12.17□□□□□ -0.46
PABPC1-224ENST00000610907 NAPBQ9H115 298 aa12.17□□□□□ -0.46
PABPC1-224ENST00000610907 AP5Z1O43299 807 aa12.16□□□□□ -0.46
PABPC1-224ENST00000610907 CEBPZQ03701 1054 aaKnown RBP12.16□□□□□ -0.46
PABPC1-224ENST00000610907 STX1AQ16623 288 aa12.16□□□□□ -0.46
PABPC1-224ENST00000610907 MYSM1Q5VVJ2 828 aa12.16□□□□□ -0.46
PABPC1-224ENST00000610907 CYB5R4Q7L1T6 521 aa12.16□□□□□ -0.46
PABPC1-224ENST00000610907 TMTC2Q8N394 836 aa12.16□□□□□ -0.46
PABPC1-224ENST00000610907 MAGEB6Q8N7X4 407 aa12.16□□□□□ -0.46
PABPC1-224ENST00000610907 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
PABPC1-224ENST00000610907 PHLPP1O60346 1717 aa12.16□□□□□ -0.46
PABPC1-224ENST00000610907 NID2Q14112 1375 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 STK36Q9NRP7 1315 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 ZBTB43O43298 467 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 RCAN1P53805 252 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 PLCB2Q00722 1185 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 GUCY1B3Q02153 619 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 STK38Q15208 465 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 SF3B3Q15393 1217 aaKnown RBP12.15□□□□□ -0.46
PABPC1-224ENST00000610907 SF3A1Q15459 793 aaKnown RBP12.15□□□□□ -0.46
PABPC1-224ENST00000610907 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 APOA5Q6Q788 366 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 LUZP1Q86V48 1076 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 FMR1NBQ8N0W7 255 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-224ENST00000610907 FSIP1Q8NA03 581 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 WASF1Q92558 559 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-224ENST00000610907 GNL3LQ9NVN8 582 aaKnown RBP12.15□□□□□ -0.46
PABPC1-224ENST00000610907 ANO10Q9NW15 660 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 PCDHA7Q9UN72 937 aa12.15□□□□□ -0.46
PABPC1-224ENST00000610907 C4AP0C0L4 1744 aa12.15□□□□□ -0.47
PABPC1-224ENST00000610907 C4BP0C0L5 1744 aa12.15□□□□□ -0.47
PABPC1-224ENST00000610907 GSG1L2A8MUP6 293 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 SPTLC2O15270 562 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 MBD4O95243 580 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 CDC25BP30305 580 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 FOSBP53539 338 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 PIP4K2BP78356 416 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 KIF23Q02241 960 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms