RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 TRIM27P14373 513 aa10.49□□□□□ -0.73
CCL16-204ENST00000610493 EIF1AXP47813 144 aaKnown RBP10.49□□□□□ -0.73
CCL16-204ENST00000610493 BTLAQ7Z6A9 289 aa10.49□□□□□ -0.73
CCL16-204ENST00000610493 FTSJ3Q8IY81 847 aaKnown RBP10.49□□□□□ -0.73
CCL16-204ENST00000610493 TSR2Q969E8 191 aaKnown RBP10.49□□□□□ -0.73
CCL16-204ENST00000610493 TNNQ9UQP3 1299 aa10.49□□□□□ -0.73
CCL16-204ENST00000610493 IL13P35225 146 aa10.48□□□□□ -0.73
CCL16-204ENST00000610493 ZAP70P43403 619 aa10.48□□□□□ -0.73
CCL16-204ENST00000610493 IDH3AP50213 366 aa10.48□□□□□ -0.73
CCL16-204ENST00000610493 NFE2L2Q16236 605 aa10.48□□□□□ -0.73
CCL16-204ENST00000610493 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
CCL16-204ENST00000610493 ARHGAP45Q92619 1136 aa10.48□□□□□ -0.73
CCL16-204ENST00000610493 BCL2L13Q9BXK5 485 aa10.48□□□□□ -0.73
CCL16-204ENST00000610493 CDK12Q9NYV4 1490 aaPredicted RBP10.48□□□□□ -0.73
CCL16-204ENST00000610493 METP08581 1390 aa10.48□□□□□ -0.73
CCL16-204ENST00000610493 KHNYNO15037 678 aaKnown RBP10.47□□□□□ -0.73
CCL16-204ENST00000610493 ATXN7O15265 892 aaPredicted RBP10.47□□□□□ -0.73
CCL16-204ENST00000610493 FIGNL1Q6PIW4 674 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 SND1Q7KZF4 910 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCL16-204ENST00000610493 SMC5Q8IY18 1101 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 CHMP4BQ9H444 224 aaKnown RBP10.47□□□□□ -0.73
CCL16-204ENST00000610493 USP20Q9Y2K6 914 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 TSPOAP1O95153 1857 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 NRXN3Q9Y4C0 1643 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 ZNF853P0CG23 659 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 PRKAR2BP31323 418 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 LBRQ14739 615 aaKnown RBP10.47□□□□□ -0.73
CCL16-204ENST00000610493 NUDT16Q96DE0 195 aaKnown RBP10.47□□□□□ -0.73
CCL16-204ENST00000610493 ZBTB40Q9NUA8 1239 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 DMGDHQ9UI17 866 aaKnown RBP10.47□□□□□ -0.73
CCL16-204ENST00000610493 NOB1Q9ULX3 412 aaKnown RBP10.47□□□□□ -0.73
CCL16-204ENST00000610493 LAS1LQ9Y4W2 734 aaKnown RBP10.47□□□□□ -0.73
CCL16-204ENST00000610493 PCDHGC4Q9Y5F7 938 aa10.47□□□□□ -0.73
CCL16-204ENST00000610493 KIF20BQ96Q89 1820 aa10.46□□□□□ -0.73
CCL16-204ENST00000610493 KNDC1Q76NI1 1749 aa10.46□□□□□ -0.73
CCL16-204ENST00000610493 TYRO3Q06418 890 aa10.46□□□□□ -0.74
CCL16-204ENST00000610493 LMOD3Q0VAK6 560 aa10.46□□□□□ -0.74
CCL16-204ENST00000610493 IER5Q5VY09 327 aa10.46□□□□□ -0.74
CCL16-204ENST00000610493 RGL4Q8IZJ4 473 aa10.46□□□□□ -0.74
CCL16-204ENST00000610493 ABHD17AQ96GS6 310 aa10.46□□□□□ -0.74
CCL16-204ENST00000610493 BRD7Q9NPI1 651 aa10.46□□□□□ -0.74
CCL16-204ENST00000610493 IFT57Q9NWB7 429 aa10.46□□□□□ -0.74
CCL16-204ENST00000610493 CPS1P31327 1500 aa10.46□□□□□ -0.74
CCL16-204ENST00000610493 TNRQ92752 1358 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 PIK3R4Q99570 1358 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 TMEM2Q9UHN6 1383 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 GNAI1P63096 354 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 ARHGAP4P98171 946 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
CCL16-204ENST00000610493 UBAP2LQ14157 1087 aaKnown RBP10.45□□□□□ -0.74
CCL16-204ENST00000610493 BECN1Q14457 450 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 ECM1Q16610 540 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 SV2AQ7L0J3 742 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.45□□□□□ -0.74
CCL16-204ENST00000610493 GPR152Q8TDT2 470 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 UPF2Q9HAU5 1272 aaKnown RBP10.45□□□□□ -0.74
CCL16-204ENST00000610493 LRRC7Q96NW7 1537 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 KIF13AQ9H1H9 1805 aa10.45□□□□□ -0.74
CCL16-204ENST00000610493 BNIP3LO60238 219 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 NPR3P17342 541 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 NFKBIBQ15653 356 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 COG3Q96JB2 828 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 TBC1D32Q96NH3 1257 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 OPLAHO14841 1288 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 VAMP4O75379 141 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 ARSDP51689 593 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 ALKBH2Q6NS38 261 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 TMEM57Q8N5G2 664 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 CCDC87Q9NVE4 849 aa10.44□□□□□ -0.74
CCL16-204ENST00000610493 MAPTP10636 758 aaKnown RBP10.43□□□□□ -0.74
CCL16-204ENST00000610493 INPP5BP32019 993 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 TMCO4Q5TGY1 634 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 NME9Q86XW9 330 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 ITPRIPQ8IWB1 547 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
CCL16-204ENST00000610493 EDEM1Q92611 657 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 PHACTR3Q96KR7 559 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 KIF24Q5T7B8 1368 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 PTCH1Q13635 1447 aa10.43□□□□□ -0.74
CCL16-204ENST00000610493 VIRMAQ69YN4 1812 aaKnown RBP10.42□□□□□ -0.74
CCL16-204ENST00000610493 H3BM21 787 aa10.42□□□□□ -0.74
CCL16-204ENST00000610493 TERTO14746 1132 aaKnown RBP10.42□□□□□ -0.74
CCL16-204ENST00000610493 FAM157BP0CG42 384 aa10.42□□□□□ -0.74
CCL16-204ENST00000610493 SFSWAPQ12872 951 aaKnown RBP10.42□□□□□ -0.74
CCL16-204ENST00000610493 MLECQ14165 292 aa10.42□□□□□ -0.74
CCL16-204ENST00000610493 PLEKHG1Q9ULL1 1385 aa10.42□□□□□ -0.74
CCL16-204ENST00000610493 ADAMTS13Q76LX8 1427 aa10.42□□□□□ -0.74
CCL16-204ENST00000610493 CD33P20138 364 aa10.41□□□□□ -0.74
CCL16-204ENST00000610493 TNP2Q05952 138 aa10.41□□□□□ -0.74
CCL16-204ENST00000610493 STRN4Q9NRL3 753 aa10.41□□□□□ -0.74
CCL16-204ENST00000610493 BRPF3Q9ULD4 1205 aa10.41□□□□□ -0.74
CCL16-204ENST00000610493 POLIQ9UNA4 740 aa10.41□□□□□ -0.74
CCL16-204ENST00000610493 RTCBQ9Y3I0 505 aaKnown RBP10.41□□□□□ -0.74
CCL16-204ENST00000610493 FZD6O60353 706 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms