RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
POLR2J3-219ENST00000608621 ANKRD13AQ8IZ07 590 aa16.82■□□□□ 0.28
POLR2J3-219ENST00000608621 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
POLR2J3-219ENST00000608621 TCP10L2B9ZVM9 353 aa16.81■□□□□ 0.28
POLR2J3-219ENST00000608621 IGF2BP3O00425 579 aaKnown RBP eCLIP16.81■□□□□ 0.28
POLR2J3-219ENST00000608621 GJA5P36382 358 aa16.81■□□□□ 0.28
POLR2J3-219ENST00000608621 BCAMP50895 628 aa16.81■□□□□ 0.28
POLR2J3-219ENST00000608621 VGLL2Q8N8G2 317 aa16.81■□□□□ 0.28
POLR2J3-219ENST00000608621 FBXO46Q6PJ61 603 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-219ENST00000608621 TEPSINQ96N21 525 aa16.8■□□□□ 0.28
POLR2J3-219ENST00000608621 TNNI2P48788 182 aa16.79■□□□□ 0.28
POLR2J3-219ENST00000608621 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-219ENST00000608621 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
POLR2J3-219ENST00000608621 TBC1D22AQ8WUA7 517 aa16.79■□□□□ 0.28
POLR2J3-219ENST00000608621 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
POLR2J3-219ENST00000608621 TMEM39BQ9GZU3 492 aa16.79■□□□□ 0.28
POLR2J3-219ENST00000608621 ELP3Q9H9T3 547 aa16.79■□□□□ 0.28
POLR2J3-219ENST00000608621 ALDH1L2Q3SY69 923 aa16.78■□□□□ 0.28
POLR2J3-219ENST00000608621 OTUD7BQ6GQQ9 843 aa16.78■□□□□ 0.28
POLR2J3-219ENST00000608621 PTPN18Q99952 460 aa16.78■□□□□ 0.28
POLR2J3-219ENST00000608621 TNRC18O15417 2968 aaPredicted RBP16.78■□□□□ 0.28
POLR2J3-219ENST00000608621 TESPA1A2RU30 521 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 IFIT1P09914 478 aaKnown RBP16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 FGFR2P21802 821 aa16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 RFX5P48382 616 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 MAP3K9P80192 1104 aa16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 OPTNQ96CV9 577 aa16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 MRIQ9BWK5 157 aa16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
POLR2J3-219ENST00000608621 EYA2O00167 538 aa16.76■□□□□ 0.27
POLR2J3-219ENST00000608621 CACNB3P54284 484 aa16.76■□□□□ 0.27
POLR2J3-219ENST00000608621 PUM3Q15397 648 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-219ENST00000608621 SMC4Q9NTJ3 1288 aa16.76■□□□□ 0.27
POLR2J3-219ENST00000608621 PDE4DIPQ5VU43 2346 aa16.75■□□□□ 0.27
POLR2J3-219ENST00000608621 CRHR2Q13324 411 aa16.75■□□□□ 0.27
POLR2J3-219ENST00000608621 OTOP1Q7RTM1 612 aa16.75■□□□□ 0.27
POLR2J3-219ENST00000608621 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
POLR2J3-219ENST00000608621 MS4A4AQ96JQ5 239 aa16.75■□□□□ 0.27
POLR2J3-219ENST00000608621 ARAP2Q8WZ64 1704 aa16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 SLC5A1P13866 664 aa16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 VGLL4Q14135 290 aa16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 APOBEC3HQ6NTF7 200 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 ATG9AQ7Z3C6 839 aa16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 LPIN2Q92539 896 aa16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 ZDHHC15Q96MV8 337 aa16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
POLR2J3-219ENST00000608621 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
POLR2J3-219ENST00000608621 SLC34A2O95436 690 aa16.73■□□□□ 0.27
POLR2J3-219ENST00000608621 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
POLR2J3-219ENST00000608621 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
POLR2J3-219ENST00000608621 ERO1AQ96HE7 468 aa16.73■□□□□ 0.27
POLR2J3-219ENST00000608621 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
POLR2J3-219ENST00000608621 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
POLR2J3-219ENST00000608621 CSADQ9Y600 493 aa16.73■□□□□ 0.27
POLR2J3-219ENST00000608621 MAST3O60307 1309 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 LAMB1P07942 1786 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 OTOFQ9HC10 1997 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 CCL15-CCL14A0A0B4J2E2 113 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 GTF2A2P52657 109 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 SP3Q02447 781 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 CCL15Q16663 113 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 FKBP1CQ5VVH2 108 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 FAM83AQ86UY5 434 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 WDR66Q8TBY9 1149 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 BRI3BPQ8WY22 251 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 SIL1Q9H173 461 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 PTPN22Q9Y2R2 807 aa16.72■□□□□ 0.27
POLR2J3-219ENST00000608621 OTUD5Q96G74 571 aa16.71■□□□□ 0.27
POLR2J3-219ENST00000608621 EFCC1Q9HA90 598 aa16.71■□□□□ 0.27
POLR2J3-219ENST00000608621 CEP126Q9P2H0 1117 aa16.71■□□□□ 0.27
POLR2J3-219ENST00000608621 TAF1CQ15572 869 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-219ENST00000608621 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-219ENST00000608621 ZFYVE28Q9HCC9 887 aa16.7■□□□□ 0.26
POLR2J3-219ENST00000608621 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
POLR2J3-219ENST00000608621 SPDYE5A6NIY4 337 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 CIAO1O76071 339 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 CAP1Q01518 475 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 ATP2B3Q16720 1220 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 ERO1BQ86YB8 467 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 FAM43AQ8N2R8 423 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 HOOK2Q96ED9 719 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
POLR2J3-219ENST00000608621 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
POLR2J3-219ENST00000608621 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-219ENST00000608621 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-219ENST00000608621 CETPP11597 493 aa16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 PRDX5P30044 214 aa16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-219ENST00000608621 TCP10Q12799 353 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms