RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TTC36A6NLP5 189 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 MYBL2P10244 700 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 ADCY2Q08462 1091 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 SNX1Q13596 522 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 NAA25Q14CX7 972 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 BSDC1Q9NW68 430 aaPredicted RBP14.4□□□□□ -0.1
CTCFL-218ENST00000608440 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.4□□□□□ -0.1
CTCFL-218ENST00000608440 NWD1Q149M9 1564 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 NRKQ7Z2Y5 1582 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 ANKRD18AQ8IVF6 992 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 PARD3BQ8TEW8 1205 aa14.4□□□□□ -0.1
CTCFL-218ENST00000608440 NAT10Q9H0A0 1025 aaKnown RBP14.4□□□□□ -0.1
CTCFL-218ENST00000608440 SPATS2LQ9NUQ6 558 aaKnown RBP14.4□□□□□ -0.1
CTCFL-218ENST00000608440 ANKRD33BA6NCL7 494 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 HMMRO75330 724 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 SYF2O95926 243 aaKnown RBP14.39□□□□□ -0.11
CTCFL-218ENST00000608440 LMOD1P29536 600 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-218ENST00000608440 SRGAP1Q7Z6B7 1085 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 PROSER2Q86WR7 435 aaPredicted RBP14.39□□□□□ -0.11
CTCFL-218ENST00000608440 ARMC2Q8NEN0 867 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 KIFC2Q96AC6 838 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 GOLPH3LQ9H4A5 285 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 BIN1O00499 593 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 USP5P45974 858 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 GRIK3Q13003 919 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 PSMD2Q13200 908 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 GDAP1L1Q96MZ0 367 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 NUCKS1Q9H1E3 243 aaKnown RBP14.39□□□□□ -0.11
CTCFL-218ENST00000608440 TPCN1Q9ULQ1 816 aa14.39□□□□□ -0.11
CTCFL-218ENST00000608440 KINO60870 393 aaKnown RBP14.38□□□□□ -0.11
CTCFL-218ENST00000608440 CUTAO60888 179 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 RTN2O75298 545 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 RPSAP08865 295 aaKnown RBP14.38□□□□□ -0.11
CTCFL-218ENST00000608440 IRAK1P51617 712 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 STK3Q13188 491 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 TCEANC2Q96MN5 208 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 FTOQ9C0B1 505 aaKnown RBP eCLIP14.38□□□□□ -0.11
CTCFL-218ENST00000608440 EMILIN1Q9Y6C2 1016 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 DPCR1Q3MIW9 517 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 OTUD6BQ8N6M0 293 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 CCDC26Q8TAB7 109 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 ZBTB10Q96DT7 871 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 BAG1Q99933 345 aaPredicted RBP14.38□□□□□ -0.11
CTCFL-218ENST00000608440 SH3GL3Q99963 347 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 LRRCC1Q9C099 1032 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
CTCFL-218ENST00000608440 RAB21Q9UL25 225 aa14.38□□□□□ -0.11
CTCFL-218ENST00000608440 COL3A1P02461 1466 aaPredicted RBP14.38□□□□□ -0.11
CTCFL-218ENST00000608440 A0A1B0GUA9 196 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 IPO7O95373 1038 aaKnown RBP14.37□□□□□ -0.11
CTCFL-218ENST00000608440 FNTAP49354 379 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 ZSCAN31Q96LW9 406 aaPredicted RBP14.37□□□□□ -0.11
CTCFL-218ENST00000608440 DESI2Q9BSY9 194 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 SOS1Q07889 1333 aaPredicted RBP14.37□□□□□ -0.11
CTCFL-218ENST00000608440 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 CTAGE5O15320 804 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 ATP1A3P13637 1013 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
CTCFL-218ENST00000608440 TOGARAM2Q6ZUX3 1019 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 NBPF3Q9H094 633 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 RPS6KL1Q9Y6S9 549 aa14.37□□□□□ -0.11
CTCFL-218ENST00000608440 ENO4A6NNW6 628 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 PRPF6O94906 941 aaKnown RBP14.36□□□□□ -0.11
CTCFL-218ENST00000608440 PDCP20941 246 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 FOSBP53539 338 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 PRPF40BQ6NWY9 871 aaKnown RBP14.36□□□□□ -0.11
CTCFL-218ENST00000608440 SLC4A10Q6U841 1118 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 CCDC73Q6ZRK6 1079 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.36□□□□□ -0.11
CTCFL-218ENST00000608440 CEP112Q8N8E3 955 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 PIK3R5Q8WYR1 880 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 LSG1Q9H089 658 aaKnown RBP14.36□□□□□ -0.11
CTCFL-218ENST00000608440 KLC4Q9NSK0 619 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 ADCY9O60503 1353 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 KIAA0754O94854 1291 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 ZNF202O95125 648 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 SSBP05455 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
CTCFL-218ENST00000608440 E2F5Q15329 346 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 CEP85LQ5SZL2 805 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 IL1RAPL2Q9NP60 686 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
CTCFL-218ENST00000608440 SALL3Q9BXA9 1300 aa14.36□□□□□ -0.11
CTCFL-218ENST00000608440 MRPL12P52815 198 aaKnown RBP14.35□□□□□ -0.11
CTCFL-218ENST00000608440 FANCCQ00597 558 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 COL9A3Q14050 684 aaPredicted RBP14.35□□□□□ -0.11
CTCFL-218ENST00000608440 NUTM1Q86Y26 1132 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 PDILTQ8N807 584 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 DPF2Q92785 391 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 OVOS2A0A0J9YW53 1432 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 OVOS2Q6IE36 1432 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 PPP1R12BO60237 982 aaPredicted RBP14.35□□□□□ -0.11
CTCFL-218ENST00000608440 CLSTN1O94985 981 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 HMOX1P09601 288 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 ESCO1Q5FWF5 840 aa14.35□□□□□ -0.11
CTCFL-218ENST00000608440 PHACTR3Q96KR7 559 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms