RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 TMX1Q9H3N1 280 aa14.43□□□□□ -0.1
MSH6-212ENST00000607272 ORC3Q9UBD5 711 aaPredicted RBP14.43□□□□□ -0.1
MSH6-212ENST00000607272 A0A0G2JLW4 131 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 EFCAB8A8MWE9 144 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 ZSCAN12O43309 604 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 CYP2C19P33261 490 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 IL15P40933 162 aaPredicted RBP14.42□□□□□ -0.1
MSH6-212ENST00000607272 UBASH3AP57075 661 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 OTUD7BQ6GQQ9 843 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 ATG9AQ7Z3C6 839 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 NFATC2IPQ8NCF5 419 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 LRRN4CLQ8ND94 238 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 SYTL4Q96C24 671 aaPredicted RBP14.42□□□□□ -0.1
MSH6-212ENST00000607272 ZNF496Q96IT1 587 aaPredicted RBP14.42□□□□□ -0.1
MSH6-212ENST00000607272 ST7Q9NRC1 585 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 TUBE1Q9UJT0 475 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 CCDC9Q9Y3X0 531 aaKnown RBP14.42□□□□□ -0.1
MSH6-212ENST00000607272 CPLX1O14810 134 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 IFIT1P09914 478 aaKnown RBP14.42□□□□□ -0.1
MSH6-212ENST00000607272 SLC39A14Q15043 492 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 IMMTQ16891 758 aaKnown RBP14.42□□□□□ -0.1
MSH6-212ENST00000607272 TEX35Q5T0J7 233 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 TRIM65Q6PJ69 517 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 SLIT3O75094 1523 aa14.42□□□□□ -0.1
MSH6-212ENST00000607272 ATP5J2-PTCD1G3V325 749 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 PTCD1O75127 700 aaKnown RBP14.41□□□□□ -0.1
MSH6-212ENST00000607272 SERPINC1P01008 464 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 SYKP43405 635 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 TIMM10P62072 90 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 MYL5Q02045 173 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 JMYQ8N9B5 988 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 PLBD2Q8NHP8 589 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 RAPGEF4Q8WZA2 1011 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 HSD3B7Q9H2F3 369 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 TMEM94Q12767 1356 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
MSH6-212ENST00000607272 TADA3O75528 432 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 PLA2G4AP47712 749 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 KIF23Q02241 960 aaPredicted RBP14.41□□□□□ -0.1
MSH6-212ENST00000607272 GORABQ5T7V8 394 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 TTLL5Q6EMB2 1281 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 TTC5Q8N0Z6 440 aa14.41□□□□□ -0.1
MSH6-212ENST00000607272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.41□□□□□ -0.1
MSH6-212ENST00000607272 KLF18A0A0U1RQI7 1052 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 GOLGA6L9A6NEM1 432 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 ERICH4A6NGS2 130 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 GOLGA8BA8MQT2 603 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 PRC1O43663 620 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 URI1O94763 535 aaPredicted RBP14.4□□□□□ -0.1
MSH6-212ENST00000607272 ATP1A3P13637 1013 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 FOXO4P98177 505 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 CFAP100Q494V2 611 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 VSTM4Q8IW00 320 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 MPHOSPH8Q99549 860 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 HPS5Q9UPZ3 1129 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 AXIN2Q9Y2T1 843 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 CAMTA1Q9Y6Y1 1673 aa14.4□□□□□ -0.1
MSH6-212ENST00000607272 H7C1W4 665 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 M0R2C6 588 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 ARHGAP6O43182 974 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 ZFYP08048 801 aaPredicted RBP14.39□□□□□ -0.11
MSH6-212ENST00000607272 CCDC158Q5M9N0 1113 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 REXO1L1PQ8IX06 675 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 UTP14AQ9BVJ6 771 aaKnown RBP14.39□□□□□ -0.11
MSH6-212ENST00000607272 C5P01031 1676 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 PPP6R2O75170 966 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 TOP1P11387 765 aaKnown RBP14.39□□□□□ -0.11
MSH6-212ENST00000607272 OSBP2Q969R2 916 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 GPHNQ9NQX3 736 aaPredicted RBP14.39□□□□□ -0.11
MSH6-212ENST00000607272 HPSEQ9Y251 543 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 KDM6AO15550 1401 aaPredicted RBP14.39□□□□□ -0.11
MSH6-212ENST00000607272 WDR19Q8NEZ3 1342 aa14.39□□□□□ -0.11
MSH6-212ENST00000607272 KIF28PB7ZC32 967 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 WDHD1O75717 1129 aaPredicted RBP14.38□□□□□ -0.11
MSH6-212ENST00000607272 PHKG2P15735 406 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 OLFM4Q6UX06 510 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 MB21D2Q8IYB1 491 aaPredicted RBP14.38□□□□□ -0.11
MSH6-212ENST00000607272 NCOA7Q8NI08 942 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.11
MSH6-212ENST00000607272 PARP3Q9Y6F1 533 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 FAM237AA0A1B0GTK4 181 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 EYA2O00167 538 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 RALYLQ86SE5 291 aaKnown RBP14.38□□□□□ -0.11
MSH6-212ENST00000607272 CARD6Q9BX69 1037 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.38□□□□□ -0.11
MSH6-212ENST00000607272 MROH7-TTC4A0A0A0MT08 1334 aa14.38□□□□□ -0.11
MSH6-212ENST00000607272 A0A1B0GUL7 405 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 CIAO1O76071 339 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 FGAP02671 866 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 MARCKSP29966 332 aaPredicted RBP14.37□□□□□ -0.11
MSH6-212ENST00000607272 PIP4K2AP48426 406 aaPredicted RBP14.37□□□□□ -0.11
MSH6-212ENST00000607272 ISM2Q6H9L7 571 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 GPR161Q8N6U8 529 aaKnown RBP14.37□□□□□ -0.11
MSH6-212ENST00000607272 ATG3Q9NT62 314 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 SPEF2Q9C093 1822 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 TATP17735 454 aaPredicted RBP14.37□□□□□ -0.11
MSH6-212ENST00000607272 IFNL2Q8IZJ0 200 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 DPF2Q92785 391 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 TMEM51Q9NW97 253 aa14.37□□□□□ -0.11
MSH6-212ENST00000607272 PPP2R2CQ9Y2T4 447 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms