RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 LRRFIP1Q32MZ4 808 aaKnown RBP8.19□□□□□ -1.1
CDC40-207ENST00000606893 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.19□□□□□ -1.1
CDC40-207ENST00000606893 RUFY2Q8WXA3 655 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 XAGE2Q96GT9 111 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 PDRG1Q9NUG6 133 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 APPP05067 770 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 GRM1Q13255 1194 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 RAI14Q9P0K7 980 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 ATP10DQ9P241 1426 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 H3BQV1 296 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 SYT1P21579 422 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 CACNB3P54284 484 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 MTX1Q13505 466 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 KLHL40Q2TBA0 621 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 SKOR2Q2VWA4 1001 aaPredicted RBP8.19□□□□□ -1.1
CDC40-207ENST00000606893 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 CCDC94Q9BW85 323 aaPredicted RBP8.19□□□□□ -1.1
CDC40-207ENST00000606893 BRIP1Q9BX63 1249 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 COPRSQ9NQ92 184 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 GPHNQ9NQX3 736 aaPredicted RBP8.19□□□□□ -1.1
CDC40-207ENST00000606893 PIM2Q9P1W9 311 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 LRP2BPQ9P2M1 347 aa8.19□□□□□ -1.1
CDC40-207ENST00000606893 DBNLQ9UJU6 430 aaKnown RBP8.19□□□□□ -1.1
CDC40-207ENST00000606893 IFIT1P09914 478 aaKnown RBP8.18□□□□□ -1.1
CDC40-207ENST00000606893 NMIQ13287 307 aaPredicted RBP8.18□□□□□ -1.1
CDC40-207ENST00000606893 DALRD3Q5D0E6 543 aaKnown RBP8.18□□□□□ -1.1
CDC40-207ENST00000606893 DLK2Q6UY11 383 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 FILIP1Q7Z7B0 1213 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 TSPY26PQ9H489 355 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 POLLQ9UGP5 575 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 KCNG1Q9UIX4 513 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 SLURP2P0DP57 97 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 IRX3P78415 501 aaPredicted RBP8.18□□□□□ -1.1
CDC40-207ENST00000606893 POLA2Q14181 598 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 ATG9AQ7Z3C6 839 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 LUZP1Q86V48 1076 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 FAM177A1Q8N128 213 aaPredicted RBP8.18□□□□□ -1.1
CDC40-207ENST00000606893 SNX21Q969T3 373 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 SBF2Q86WG5 1849 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 RAD21O60216 631 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 PTGER2P43116 358 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 ZAP70P43403 619 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 TNNI3KQ59H18 835 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 PRAMEF18Q5VWM3 479 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 MASTLQ96GX5 879 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 TRMT1Q9NXH9 659 aaKnown RBP8.18□□□□□ -1.1
CDC40-207ENST00000606893 PCDHAC2Q9Y5I4 1007 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 SNX14Q9Y5W7 946 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 FPGT-TNNI3KV9GXZ4 949 aa8.18□□□□□ -1.1
CDC40-207ENST00000606893 C4BP0C0L5 1744 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 SHTN1A0MZ66 631 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 ADCY5O95622 1261 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 POLR3DP05423 398 aaPredicted RBP8.17□□□□□ -1.1
CDC40-207ENST00000606893 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 ZSCAN30Q86W11 494 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 GNL3LQ9NVN8 582 aaKnown RBP8.17□□□□□ -1.1
CDC40-207ENST00000606893 GGA1Q9UJY5 639 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 IBTKQ9P2D0 1353 aaPredicted RBP8.17□□□□□ -1.1
CDC40-207ENST00000606893 A0A0D9SFI3 127 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 KIF20AO95235 890 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 GRAPQ13588 217 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 GRAPLQ8TC17 118 aaPredicted RBP8.17□□□□□ -1.1
CDC40-207ENST00000606893 RBM8AQ9Y5S9 174 aaKnown RBP8.17□□□□□ -1.1
CDC40-207ENST00000606893 PXDNLA1KZ92 1463 aa8.17□□□□□ -1.1
CDC40-207ENST00000606893 UTYO14607 1347 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 PDE8BO95263 885 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 RFX5P48382 616 aaPredicted RBP8.16□□□□□ -1.1
CDC40-207ENST00000606893 CAVIN4Q5BKX8 364 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 RUFY3Q7L099 469 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 CDC37L1Q7L3B6 337 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 ZNF589Q86UQ0 364 aaPredicted RBP8.16□□□□□ -1.1
CDC40-207ENST00000606893 C16orf45Q96MC5 204 aaPredicted RBP8.16□□□□□ -1.1
CDC40-207ENST00000606893 ZNF804BA4D1E1 1349 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 STX6O43752 255 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 SLC5A1P13866 664 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 NPR1P16066 1061 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 ZKSCAN1P17029 563 aaPredicted RBP8.16□□□□□ -1.1
CDC40-207ENST00000606893 KIAA2012Q0VF49 1180 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 NAA30Q147X3 362 aaPredicted RBP8.16□□□□□ -1.1
CDC40-207ENST00000606893 CCDC102BQ68D86 513 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 TTLL5Q6EMB2 1281 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 CNPY4Q8N129 248 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 FAM184AQ8NB25 1140 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 BRF1Q92994 677 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 RNF181Q9P0P0 153 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 ISY1Q9ULR0 285 aaKnown RBP8.16□□□□□ -1.1
CDC40-207ENST00000606893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDC40-207ENST00000606893 KDM3BQ7LBC6 1761 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 HIP1O00291 1037 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 YBX3P16989 372 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDC40-207ENST00000606893 TCP10Q12799 353 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 LRMPQ12912 555 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 PICALMQ13492 652 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 GRIK5Q16478 980 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 RRP12Q5JTH9 1297 aaKnown RBP8.16□□□□□ -1.1
CDC40-207ENST00000606893 TRIM5Q9C035 493 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.16□□□□□ -1.1
CDC40-207ENST00000606893 FZD1Q9UP38 647 aa8.16□□□□□ -1.1
CDC40-207ENST00000606893 PRDX5P30044 214 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms