RNA–Protein interactions for RNA: ENST00000602998.1

SH3YL1-227, Transcript of SH3 and SYLF domain containing 1, humanhuman

Gene SH3YL1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-227ENST00000602998 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 SP3Q02447 781 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 OPTNQ96CV9 577 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 ERO1AQ96HE7 468 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 PPP2R3BQ9Y5P8 575 aa12.58□□□□□ -0.4
SH3YL1-227ENST00000602998 TCP10L2B9ZVM9 353 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 MYO1BO43795 1136 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 CACNB3P54284 484 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 FKBP1AP62942 108 aaKnown RBP12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 EXOSC9Q06265 439 aaKnown RBP12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 CCDC27Q2M243 656 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 MFSD14BQ5SR56 506 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 ANKRD13AQ8IZ07 590 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 FAM43AQ8N2R8 423 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 TDRD7Q8NHU6 1098 aaKnown RBP12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 KAZALD1Q96I82 304 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 FAM84BQ96KN1 310 aaPredicted RBP12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 ARHGAP39Q9C0H5 1083 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 PTCH2Q9Y6C5 1203 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
SH3YL1-227ENST00000602998 VGLL4Q14135 290 aa12.56□□□□□ -0.4
SH3YL1-227ENST00000602998 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
SH3YL1-227ENST00000602998 LDHAL6AQ6ZMR3 332 aa12.56□□□□□ -0.4
SH3YL1-227ENST00000602998 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
SH3YL1-227ENST00000602998 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
SH3YL1-227ENST00000602998 CCL15-CCL14A0A0B4J2E2 113 aa12.55□□□□□ -0.4
SH3YL1-227ENST00000602998 FXR1P51114 621 aaKnown RBP eCLIP12.55□□□□□ -0.4
SH3YL1-227ENST00000602998 CCL15Q16663 113 aa12.55□□□□□ -0.4
SH3YL1-227ENST00000602998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.55□□□□□ -0.4
SH3YL1-227ENST00000602998 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
SH3YL1-227ENST00000602998 UNCXA6NJT0 531 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 GRM8O00222 908 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 CRKP46108 304 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 TAF1CQ15572 869 aaPredicted RBP12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 OTUD7BQ6GQQ9 843 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 OTUD5Q96G74 571 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 IL16Q14005 1332 aa12.54□□□□□ -0.4
SH3YL1-227ENST00000602998 CTGFP29279 349 aa12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 MAP3K9P80192 1104 aa12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 CHAF1AQ13111 956 aaPredicted RBP12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 TAF7LQ5H9L4 462 aa12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 SH3TC2Q8TF17 1288 aa12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 ZKSCAN4Q969J2 545 aaPredicted RBP12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 SERPINA10Q9UK55 444 aa12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 RIPOR2Q9Y4F9 1068 aa12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 SNCAIPQ9Y6H5 919 aa12.53□□□□□ -0.4
SH3YL1-227ENST00000602998 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.41
SH3YL1-227ENST00000602998 UBE4AQ14139 1066 aa12.52□□□□□ -0.41
SH3YL1-227ENST00000602998 LRRC24Q50LG9 513 aa12.52□□□□□ -0.41
SH3YL1-227ENST00000602998 BTBD19C9JJ37 291 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 IRF6O14896 467 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 GTF2A2P52657 109 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 TNFAIP1Q13829 316 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 SLC9C1Q4G0N8 1177 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 SLC4A10Q6U841 1118 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 FBXO33Q7Z6M2 555 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 KLHDC4Q8TBB5 520 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 TMEM106CQ9BVX2 250 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 ZFYVE28Q9HCC9 887 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 C9orf78Q9NZ63 289 aaPredicted RBP12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 LAMA3Q16787 3333 aa12.51□□□□□ -0.41
SH3YL1-227ENST00000602998 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
SH3YL1-227ENST00000602998 SPDYE5A6NIY4 337 aa12.5□□□□□ -0.41
SH3YL1-227ENST00000602998 H0YGN5 161 aa12.5□□□□□ -0.41
SH3YL1-227ENST00000602998 MTFR1Q15390 333 aa12.5□□□□□ -0.41
SH3YL1-227ENST00000602998 SLC4A8Q2Y0W8 1093 aa12.5□□□□□ -0.41
SH3YL1-227ENST00000602998 INPP5BP32019 993 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 BCAMP50895 628 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 LACTBP83111 547 aaPredicted RBP12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 APOBEC3HQ6NTF7 200 aaKnown RBP12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 MIGA2Q7L4E1 593 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 ANKRD44Q8N8A2 993 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 VGLL2Q8N8G2 317 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 SHISA4Q96DD7 197 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 WRNIP1Q96S55 665 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 CSADQ9Y600 493 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
SH3YL1-227ENST00000602998 A0A0C4DFX4 3053 aa12.48□□□□□ -0.41
SH3YL1-227ENST00000602998 TLR2O60603 784 aa12.48□□□□□ -0.41
SH3YL1-227ENST00000602998 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
SH3YL1-227ENST00000602998 SRCIN1Q9C0H9 1055 aa12.48□□□□□ -0.41
SH3YL1-227ENST00000602998 CPA4Q9UI42 421 aa12.48□□□□□ -0.41
SH3YL1-227ENST00000602998 COL6A3P12111 3177 aa12.48□□□□□ -0.41
SH3YL1-227ENST00000602998 ALDH1L1O75891 902 aa12.47□□□□□ -0.41
SH3YL1-227ENST00000602998 TNNI2P48788 182 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms