RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SASS6Q6UVJ0 657 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 MNS1Q8NEH6 495 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 IPCEF1Q8WWN9 437 aaPredicted RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 TIFAQ96CG3 184 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 GPR101Q96P66 508 aaPredicted RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 SMAD5Q99717 465 aaKnown RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ZIM2Q9NZV7 527 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ANAPC4Q9UJX5 808 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 R3HCC1Q9Y3T6 440 aaKnown RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 EMILIN1Q9Y6C2 1016 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 RNF123Q5XPI4 1314 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 SAMD9Q5K651 1589 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 TRAPPC8Q9Y2L5 1435 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 TMEM238LA0A1B0GVL6 79 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ZNF853P0CG23 659 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 COL6A1P12109 1028 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 GLULP15104 373 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 PSMC1P62191 440 aaKnown RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 GNL2Q13823 731 aaKnown RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 FAM83BQ5T0W9 1011 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ACBD5Q5T8D3 534 aaPredicted RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 TBC1D20Q96BZ9 403 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ARMC5Q96C12 935 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 FAM210AQ96ND0 272 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ZBTB3Q9H5J0 574 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 C9orf78Q9NZ63 289 aaPredicted RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ABCF2Q9UG63 623 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 PCDHB3Q9Y5E6 796 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 RAD50Q92878 1312 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 VWDEQ8N2E2 1590 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 HECW1Q76N89 1606 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 A0A1W2PRQ8 180 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 CAND2O75155 1236 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 MSNP26038 577 aaKnown RBP5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 OAS2P29728 719 aaKnown RBP5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 CHMP4BP1P59074 171 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 ARHGAP4P98171 946 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 TBC1D10BQ4KMP7 808 aaPredicted RBP5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 OGFOD1Q8N543 542 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 UBR7Q8N806 425 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 ANKRD42Q8N9B4 389 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 TEX19Q8NA77 164 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 SNRNP27Q8WVK2 155 aaKnown RBP5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 MRS2Q9HD23 443 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 VTI1BQ9UEU0 232 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 PPP2R3BQ9Y5P8 575 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 SYNRGQ9UMZ2 1314 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 IPO5O00410 1097 aaKnown RBP5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 PPEF1O14829 653 aaPredicted RBP5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 GRM1Q13255 1194 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 HS1BP3Q53T59 392 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 PLEKHG4Q58EX7 1191 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 PPP2R2DQ66LE6 453 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 UBE2Q1Q7Z7E8 422 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 LMNTD2Q8IXW0 634 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 ZNF713Q8N859 430 aaPredicted RBP5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 TBC1D31Q96DN5 1066 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 VMP1Q96GC9 406 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 SLX1AQ9BQ83 275 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 GRPEL1Q9HAV7 217 aa5.91□□□□□ -1.46
SPTBN1-206ENST00000602898 SHPRHQ149N8 1683 aa5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 RHOBTB3O94955 611 aa5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 TSPAN7P41732 249 aa5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 NOP2P46087 812 aaKnown RBP5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 MLECQ14165 292 aa5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 MSL1Q68DK7 614 aa5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 MKNK1Q9BUB5 465 aa5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 MED4Q9NPJ6 270 aa5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 RRBP1Q9P2E9 1410 aaKnown RBP5.9□□□□□ -1.46
SPTBN1-206ENST00000602898 MYO5CQ9NQX4 1742 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 TNFAIP3P21580 790 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 PIK3CAP42336 1068 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 MAPK8P45983 427 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 ZNF131P52739 623 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 NUCB1Q02818 461 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 CCDC173Q0VFZ6 552 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 TAF11Q15544 211 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 VPS72Q15906 364 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 THSD4Q6ZMP0 1018 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 CFAP53Q96M91 514 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 FRMD6Q96NE9 622 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 SEPT3Q9UH03 358 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 NDUFB9Q9Y6M9 179 aa5.9□□□□□ -1.47
SPTBN1-206ENST00000602898 CCDC163A0A0D9SF12 145 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 MASP1P48740 699 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 PPM1FP49593 454 aaPredicted RBP5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 IFT88Q13099 833 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 DGKHQ86XP1 1220 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 SH3KBP1Q96B97 665 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 CDHR1Q96JP9 859 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 SLC26A8Q96RN1 970 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 XPO4Q9C0E2 1151 aaKnown RBP5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 RANBP17Q9H2T7 1088 aaKnown RBP5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 NEUROD4Q9HD90 331 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 RIC8AQ9NPQ8 531 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 SNTG2Q9NY99 539 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 MAGED1Q9Y5V3 778 aaPredicted RBP5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 DIP2CQ9Y2E4 1556 aa5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 CEP170BQ9Y4F5 1589 aaPredicted RBP5.89□□□□□ -1.47
SPTBN1-206ENST00000602898 CAMSAP1Q5T5Y3 1602 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms