RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ZBTB38Q8NAP3 1195 aaPredicted RBP17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 XAGE2Q96GT9 111 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 TFIP11Q9UBB9 837 aaKnown RBP17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 A0A0G2JLW4 131 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 URI1O94763 535 aaPredicted RBP17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 CUL4AQ13619 759 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 ATG9AQ7Z3C6 839 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 F13A1P00488 732 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 GUCY2CP25092 1073 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 CCDC158Q5M9N0 1113 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 VPS53Q5VIR6 699 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 COPRSQ9NQ92 184 aa17.78■□□□□ 0.44
PPFIA3-206ENST00000602655 NBPF5PQ86XG9 351 aaPredicted RBP17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 LRRC8AQ8IWT6 810 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 EVI5LQ96CN4 794 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 UTP14AQ9BVJ6 771 aaKnown RBP17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 OSBPL3Q9H4L5 887 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 STAP2Q9UGK3 403 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 SGSM2O43147 1006 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 RFC4P35249 363 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 ZAP70P43403 619 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 MTX1Q13505 466 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 RBM8AQ9Y5S9 174 aaKnown RBP17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
PPFIA3-206ENST00000602655 HSP90B1P14625 803 aaKnown RBP17.77■□□□□ 0.43
PPFIA3-206ENST00000602655 CASP7P55210 303 aa17.77■□□□□ 0.43
PPFIA3-206ENST00000602655 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.43
PPFIA3-206ENST00000602655 SRLQ86TD4 932 aa17.77■□□□□ 0.43
PPFIA3-206ENST00000602655 LRRN4CLQ8ND94 238 aa17.77■□□□□ 0.43
PPFIA3-206ENST00000602655 RUFY2Q8WXA3 655 aa17.77■□□□□ 0.43
PPFIA3-206ENST00000602655 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.43
PPFIA3-206ENST00000602655 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.43
PPFIA3-206ENST00000602655 CT47A1Q5JQC4 288 aaPredicted RBP17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 MSL1Q68DK7 614 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 CCDC83Q8IWF9 413 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 FAM212AQ96EL1 285 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 EPC1Q9H2F5 836 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 SALL3Q9BXA9 1300 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 LIG1P18858 919 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 IL15P40933 162 aaPredicted RBP17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 GPR101Q96P66 508 aaPredicted RBP17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
PPFIA3-206ENST00000602655 NRDCO43847 1150 aa17.75■□□□□ 0.43
PPFIA3-206ENST00000602655 CTSWP56202 376 aa17.75■□□□□ 0.43
PPFIA3-206ENST00000602655 DNAI1Q9UI46 699 aa17.75■□□□□ 0.43
PPFIA3-206ENST00000602655 BCL9O00512 1426 aa17.75■□□□□ 0.43
PPFIA3-206ENST00000602655 IL6STP40189 918 aaPredicted RBP17.75■□□□□ 0.43
PPFIA3-206ENST00000602655 TBC1D9BQ66K14 1250 aa17.75■□□□□ 0.43
PPFIA3-206ENST00000602655 FUCA2Q9BTY2 467 aa17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 PAG1Q9NWQ8 432 aa17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 JCADQ9P266 1359 aa17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 PCCAP05165 728 aaPredicted RBP17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 PHKA1P46020 1223 aa17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 RTCBQ9Y3I0 505 aaKnown RBP17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 MMP14P50281 582 aa17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 MUM1L1Q5H9M0 696 aa17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 CDCA7Q9BWT1 371 aaPredicted RBP17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 TFCP2L1Q9NZI6 479 aa17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 CEP83Q9Y592 693 aa17.74■□□□□ 0.43
PPFIA3-206ENST00000602655 TDO2P48775 406 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 BCAMP50895 628 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 SETDB2Q96T68 719 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 RAD50Q92878 1312 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 SNX14Q9Y5W7 946 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 COL18A1P39060 1754 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 CCDC172P0C7W6 258 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 MNAT1P51948 309 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 VPS72Q15906 364 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 GOLGA5Q8TBA6 731 aa17.73■□□□□ 0.43
PPFIA3-206ENST00000602655 KRT85P78386 507 aa17.72■□□□□ 0.43
PPFIA3-206ENST00000602655 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
PPFIA3-206ENST00000602655 GJB2P29033 226 aa17.72■□□□□ 0.43
PPFIA3-206ENST00000602655 CCDC91Q7Z6B0 441 aa17.72■□□□□ 0.43
PPFIA3-206ENST00000602655 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
PPFIA3-206ENST00000602655 VPS18Q9P253 973 aa17.72■□□□□ 0.43
PPFIA3-206ENST00000602655 TTC41PQ6P2S7 1318 aa17.72■□□□□ 0.43
PPFIA3-206ENST00000602655 IGHMBP2P38935 993 aaKnown RBP17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 GYG1P46976 350 aa17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 CEBPZQ03701 1054 aaKnown RBP17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 MCM6Q14566 821 aa17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 PACS2Q86VP3 889 aa17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 PDE8AO60658 829 aa17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.71■□□□□ 0.437e-7■□□□□ 8.4
PPFIA3-206ENST00000602655 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 SMARCC1Q92922 1105 aaPredicted RBP17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 CARD6Q9BX69 1037 aa17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 ADAM21Q9UKJ8 722 aa17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.43
PPFIA3-206ENST00000602655 AK2P54819 239 aa17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 RRP12Q5JTH9 1297 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms