RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 GRIK5Q16478 980 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 CAVIN4Q5BKX8 364 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 IFNL1Q8IU54 200 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 VGLL2Q8N8G2 317 aa16.53■□□□□ 0.24
RPS28-204ENST00000602140 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
RPS28-204ENST00000602140 ARAP2Q8WZ64 1704 aa16.51■□□□□ 0.23
RPS28-204ENST00000602140 TCP10L2B9ZVM9 353 aa16.51■□□□□ 0.23
RPS28-204ENST00000602140 GJA5P36382 358 aa16.51■□□□□ 0.23
RPS28-204ENST00000602140 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
RPS28-204ENST00000602140 IGF2BP3O00425 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPS28-204ENST00000602140 BCAMP50895 628 aa16.5■□□□□ 0.23
RPS28-204ENST00000602140 ALDH1L2Q3SY69 923 aa16.5■□□□□ 0.23
RPS28-204ENST00000602140 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
RPS28-204ENST00000602140 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
RPS28-204ENST00000602140 TBC1D22AQ8WUA7 517 aa16.5■□□□□ 0.23
RPS28-204ENST00000602140 TEPSINQ96N21 525 aa16.5■□□□□ 0.23
RPS28-204ENST00000602140 SMC4Q9NTJ3 1288 aa16.5■□□□□ 0.23
RPS28-204ENST00000602140 TNNI2P48788 182 aa16.49■□□□□ 0.23
RPS28-204ENST00000602140 HDLBPQ00341 1268 aaKnown RBP16.49■□□□□ 0.23
RPS28-204ENST00000602140 PUM3Q15397 648 aaKnown RBP16.49■□□□□ 0.23
RPS28-204ENST00000602140 TMEM39BQ9GZU3 492 aa16.49■□□□□ 0.23
RPS28-204ENST00000602140 ELP3Q9H9T3 547 aa16.49■□□□□ 0.23
RPS28-204ENST00000602140 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
RPS28-204ENST00000602140 FGFR2P21802 821 aa16.48■□□□□ 0.23
RPS28-204ENST00000602140 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
RPS28-204ENST00000602140 TEKT1Q969V4 418 aa16.48■□□□□ 0.23
RPS28-204ENST00000602140 EYA2O00167 538 aa16.47■□□□□ 0.23
RPS28-204ENST00000602140 CACNB3P54284 484 aa16.47■□□□□ 0.23
RPS28-204ENST00000602140 OTUD7BQ6GQQ9 843 aa16.47■□□□□ 0.23
RPS28-204ENST00000602140 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.47■□□□□ 0.23
RPS28-204ENST00000602140 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
RPS28-204ENST00000602140 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
RPS28-204ENST00000602140 LAMB1P07942 1786 aa16.46■□□□□ 0.23
RPS28-204ENST00000602140 SLC5A1P13866 664 aa16.46■□□□□ 0.23
RPS28-204ENST00000602140 CRHR2Q13324 411 aa16.46■□□□□ 0.23
RPS28-204ENST00000602140 TRMT2AQ8IZ69 625 aaKnown RBP16.46■□□□□ 0.23
RPS28-204ENST00000602140 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
RPS28-204ENST00000602140 ZDHHC15Q96MV8 337 aa16.46■□□□□ 0.23
RPS28-204ENST00000602140 PTPN18Q99952 460 aa16.46■□□□□ 0.23
RPS28-204ENST00000602140 TRIM17Q9Y577 477 aa16.46■□□□□ 0.23
RPS28-204ENST00000602140 OTOFQ9HC10 1997 aa16.46■□□□□ 0.22
RPS28-204ENST00000602140 TESPA1A2RU30 521 aaPredicted RBP16.45■□□□□ 0.22
RPS28-204ENST00000602140 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
RPS28-204ENST00000602140 MAP3K9P80192 1104 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 VGLL4Q14135 290 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 APOBEC3HQ6NTF7 200 aaKnown RBP16.45■□□□□ 0.22
RPS28-204ENST00000602140 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■□□□□ 9.4
RPS28-204ENST00000602140 LPIN2Q92539 896 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 MS4A4AQ96JQ5 239 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 SUGT1Q9Y2Z0 365 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 MAST3O60307 1309 aa16.45■□□□□ 0.22
RPS28-204ENST00000602140 OTOP1Q7RTM1 612 aa16.44■□□□□ 0.22
RPS28-204ENST00000602140 SIL1Q9H173 461 aa16.44■□□□□ 0.22
RPS28-204ENST00000602140 NOB1Q9ULX3 412 aaKnown RBP16.44■□□□□ 0.22
RPS28-204ENST00000602140 CSADQ9Y600 493 aa16.44■□□□□ 0.22
RPS28-204ENST00000602140 HHIPL2Q6UWX4 724 aa16.43■□□□□ 0.22
RPS28-204ENST00000602140 FAM83AQ86UY5 434 aa16.43■□□□□ 0.22
RPS28-204ENST00000602140 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
RPS28-204ENST00000602140 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
RPS28-204ENST00000602140 CCL15-CCL14A0A0B4J2E2 113 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
RPS28-204ENST00000602140 GTF2A2P52657 109 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 CCL15Q16663 113 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 FKBP1CQ5VVH2 108 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 CD99L2Q8TCZ2 262 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 BRI3BPQ8WY22 251 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 OTUD5Q96G74 571 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 CEP126Q9P2H0 1117 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
RPS28-204ENST00000602140 HTTP42858 3142 aa16.41■□□□□ 0.22
RPS28-204ENST00000602140 CIAO1O76071 339 aa16.41■□□□□ 0.22
RPS28-204ENST00000602140 SLC34A2O95436 690 aa16.41■□□□□ 0.22
RPS28-204ENST00000602140 SP3Q02447 781 aa16.41■□□□□ 0.22
RPS28-204ENST00000602140 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
RPS28-204ENST00000602140 WRNIP1Q96S55 665 aa16.41■□□□□ 0.22
RPS28-204ENST00000602140 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
RPS28-204ENST00000602140 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
RPS28-204ENST00000602140 SPDYE5A6NIY4 337 aa16.4■□□□□ 0.22
RPS28-204ENST00000602140 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
RPS28-204ENST00000602140 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
RPS28-204ENST00000602140 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
RPS28-204ENST00000602140 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
RPS28-204ENST00000602140 SNCAIPQ9Y6H5 919 aa16.4■□□□□ 0.22
RPS28-204ENST00000602140 PRDX5P30044 214 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
RPS28-204ENST00000602140 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 MIGA2Q7L4E1 593 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 FAM43AQ8N2R8 423 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 MEIS3Q99687 375 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 GNL3LQ9NVN8 582 aaKnown RBP16.39■□□□□ 0.21
RPS28-204ENST00000602140 HDAC5Q9UQL6 1122 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 PTPN22Q9Y2R2 807 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 DAGLAQ9Y4D2 1042 aa16.39■□□□□ 0.21
RPS28-204ENST00000602140 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
RPS28-204ENST00000602140 IL15P40933 162 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms