RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 ATG3Q9NT62 314 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 SAMM50Q9Y512 469 aa12.74□□□□□ -0.37
ZNF558-207ENST00000601372 ADAMTS13Q76LX8 1427 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 MBD4O95243 580 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 HMG20BQ9P0W2 317 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 CYP27B1O15528 508 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 ZNF165P49910 485 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 ZYXQ15942 572 aaKnown RBP12.73□□□□□ -0.37
ZNF558-207ENST00000601372 UVSSAQ2YD98 709 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 TTF2Q9UNY4 1162 aaKnown RBP12.73□□□□□ -0.37
ZNF558-207ENST00000601372 CEP131Q9UPN4 1083 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 SPATA31D1Q6ZQQ2 1576 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 APOBRQ0VD83 1088 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 CNNM2Q9H8M5 875 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 CCDC12Q8WUD4 166 aaPredicted RBP12.73□□□□□ -0.37
ZNF558-207ENST00000601372 CCDC194A0A1B0GVG4 234 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 MCM5P33992 734 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 TTC6Q86TZ1 520 aa12.73□□□□□ -0.37
ZNF558-207ENST00000601372 PTPRUQ92729 1446 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 FAM227BQ96M60 508 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 SCNN1DP51172 638 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 HSP90AA4PQ58FG1 418 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 SLC26A6Q9BXS9 759 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 ARMT1Q9H993 441 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 TTC41PQ6P2S7 1318 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 HOOK2Q96ED9 719 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 DHX8Q14562 1220 aaKnown RBP12.72□□□□□ -0.37
ZNF558-207ENST00000601372 NOLC1Q14978 699 aaKnown RBP eCLIP12.72□□□□□ -0.37
ZNF558-207ENST00000601372 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 IQGAP1P46940 1657 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 PDIA4P13667 645 aaKnown RBP12.72□□□□□ -0.37
ZNF558-207ENST00000601372 CT47A1Q5JQC4 288 aaPredicted RBP12.72□□□□□ -0.37
ZNF558-207ENST00000601372 RUFY1Q96T51 708 aa12.72□□□□□ -0.37
ZNF558-207ENST00000601372 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
ZNF558-207ENST00000601372 HEATR3Q7Z4Q2 680 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 KIAA0825Q8IV33 1275 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 SPATA5Q8NB90 893 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 KLF18A0A0U1RQI7 1052 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 LIG1P18858 919 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 SYT1P21579 422 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 SFPQP23246 707 aaKnown RBP eCLIP12.71□□□□□ -0.37
ZNF558-207ENST00000601372 CPLX3Q8WVH0 158 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 TCP10L2B9ZVM9 353 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 CNNM3Q8NE01 707 aa12.71□□□□□ -0.37
ZNF558-207ENST00000601372 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
ZNF558-207ENST00000601372 PCCAP05165 728 aaPredicted RBP12.71□□□□□ -0.38
ZNF558-207ENST00000601372 FBXO41Q8TF61 875 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 GREM2Q9H772 168 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 LMBRD1Q9NUN5 540 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 PIM2Q9P1W9 311 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 ERBB4Q15303 1308 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 RPS6KA4O75676 772 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 GYG1P46976 350 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 SULF1Q8IWU6 871 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 DBNDD2Q9BQY9 259 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 MROH2AA6NES4 1674 aa12.71□□□□□ -0.38
ZNF558-207ENST00000601372 CHRNDQ07001 517 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 FRMPD1Q5SYB0 1578 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 ZKSCAN5Q9Y2L8 839 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 TTLL6Q8N841 843 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 C3P01024 1663 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 CCDC186Q7Z3E2 898 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 TEKT1Q969V4 418 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 DBNDD1Q9H9R9 158 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 USP40Q9NVE5 1235 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 CTAGE5O15320 804 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 C21orf2O43822 256 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 MARCKSP29966 332 aaPredicted RBP12.7□□□□□ -0.38
ZNF558-207ENST00000601372 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 LUZP1Q86V48 1076 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
ZNF558-207ENST00000601372 CASQ1P31415 396 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 IARSP41252 1262 aaKnown RBP12.69□□□□□ -0.38
ZNF558-207ENST00000601372 ODF2Q5BJF6 829 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 FAM173BQ6P4H8 233 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 C17orf53Q8N3J3 647 aaPredicted RBP12.69□□□□□ -0.38
ZNF558-207ENST00000601372 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
ZNF558-207ENST00000601372 TGFBRAP1Q8WUH2 860 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 SPON1Q9HCB6 807 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 SLC27A2O14975 620 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 RXRAP19793 462 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 TYRO3Q06418 890 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 ZFYVE27Q5T4F4 411 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 PDCL3Q9H2J4 239 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 CSADQ9Y600 493 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 CPS1P31327 1500 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 OFD1O75665 1012 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 STIM1Q13586 685 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 GIGYF2Q6Y7W6 1299 aaKnown RBP12.69□□□□□ -0.38
ZNF558-207ENST00000601372 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 NPR1P16066 1061 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms