RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ITGBL1O95965 494 aaPredicted RBP16.82■□□□□ 0.28
VRK3-219ENST00000600137 NUCB1Q02818 461 aa16.82■□□□□ 0.28
VRK3-219ENST00000600137 OGFOD1Q8N543 542 aa16.82■□□□□ 0.28
VRK3-219ENST00000600137 ZC3H15Q8WU90 426 aaKnown RBP16.82■□□□□ 0.28
VRK3-219ENST00000600137 PRMT6Q96LA8 375 aaPredicted RBP16.82■□□□□ 0.28
VRK3-219ENST00000600137 BCL11AQ9H165 835 aa16.82■□□□□ 0.28
VRK3-219ENST00000600137 ANTXR1Q9H6X2 564 aa16.82■□□□□ 0.28
VRK3-219ENST00000600137 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
VRK3-219ENST00000600137 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
VRK3-219ENST00000600137 B4GALNT3Q6L9W6 998 aa16.81■□□□□ 0.28
VRK3-219ENST00000600137 CHADLQ6NUI6 762 aa16.81■□□□□ 0.28
VRK3-219ENST00000600137 PIH1D3Q9NQM4 214 aaKnown RBP16.81■□□□□ 0.28
VRK3-219ENST00000600137 HDAC9Q9UKV0 1011 aa16.81■□□□□ 0.28
VRK3-219ENST00000600137 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
VRK3-219ENST00000600137 LDHBP07195 334 aaKnown RBP16.8■□□□□ 0.28
VRK3-219ENST00000600137 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
VRK3-219ENST00000600137 CRKP46108 304 aa16.8■□□□□ 0.28
VRK3-219ENST00000600137 MAP1SQ66K74 1059 aaPredicted RBP16.8■□□□□ 0.28
VRK3-219ENST00000600137 APOBEC3HQ6NTF7 200 aaKnown RBP16.8■□□□□ 0.28
VRK3-219ENST00000600137 HHIPL2Q6UWX4 724 aa16.8■□□□□ 0.28
VRK3-219ENST00000600137 ECHDC1Q9NTX5 307 aa16.8■□□□□ 0.28
VRK3-219ENST00000600137 ABCF2Q9UG63 623 aa16.8■□□□□ 0.28
VRK3-219ENST00000600137 MYH2Q9UKX2 1941 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 DIXDC1Q155Q3 683 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
VRK3-219ENST00000600137 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 NSUN4Q96CB9 384 aaKnown RBP16.79■□□□□ 0.28
VRK3-219ENST00000600137 EDC3Q96F86 508 aaKnown RBP16.79■□□□□ 0.28
VRK3-219ENST00000600137 FAM163AQ96GL9 167 aaPredicted RBP16.79■□□□□ 0.28
VRK3-219ENST00000600137 ZDHHC15Q96MV8 337 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 HAUS7Q99871 368 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 LNPKQ9C0E8 428 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 BOLA2Q9H3K6 86 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 CLEC11AQ9Y240 323 aa16.79■□□□□ 0.28
VRK3-219ENST00000600137 DOCK2Q92608 1830 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 MECOMQ03112 1051 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 FSTL1Q12841 308 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 DLGAP5Q15398 846 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 DLK2Q6UY11 383 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 SMC1BQ8NDV3 1235 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 DAGLAQ9Y4D2 1042 aa16.78■□□□□ 0.28
VRK3-219ENST00000600137 ECM29Q5VYK3 1845 aa16.77■□□□□ 0.28
VRK3-219ENST00000600137 GAKO14976 1311 aa16.77■□□□□ 0.28
VRK3-219ENST00000600137 PASKQ96RG2 1323 aa16.77■□□□□ 0.28
VRK3-219ENST00000600137 FMR1Q06787 632 aaKnown RBP eCLIP16.77■□□□□ 0.28
VRK3-219ENST00000600137 ANGEL2Q5VTE6 544 aaKnown RBP16.77■□□□□ 0.28
VRK3-219ENST00000600137 SPTY2D1Q68D10 685 aaPredicted RBP16.77■□□□□ 0.28
VRK3-219ENST00000600137 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
VRK3-219ENST00000600137 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
VRK3-219ENST00000600137 PDE4AP27815 886 aa16.76■□□□□ 0.27
VRK3-219ENST00000600137 PDE1AP54750 535 aa16.76■□□□□ 0.27
VRK3-219ENST00000600137 C1QTNF8P60827 252 aa16.76■□□□□ 0.27
VRK3-219ENST00000600137 PLEKHM2Q8IWE5 1019 aa16.76■□□□□ 0.27
VRK3-219ENST00000600137 GLIS2Q9BZE0 524 aaPredicted RBP16.76■□□□□ 0.27
VRK3-219ENST00000600137 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
VRK3-219ENST00000600137 GGA3Q9NZ52 723 aa16.76■□□□□ 0.27
VRK3-219ENST00000600137 SCAF8Q9UPN6 1271 aaKnown RBP16.76■□□□□ 0.27
VRK3-219ENST00000600137 MAST3O60307 1309 aa16.75■□□□□ 0.27
VRK3-219ENST00000600137 PITPNM2Q9BZ72 1349 aa16.75■□□□□ 0.27
VRK3-219ENST00000600137 IGSF3O75054 1194 aa16.75■□□□□ 0.27
VRK3-219ENST00000600137 MX1P20591 662 aa16.75■□□□□ 0.27
VRK3-219ENST00000600137 SPDYE2Q495Y8 402 aa16.75■□□□□ 0.27
VRK3-219ENST00000600137 ADGRA1Q86SQ6 560 aa16.75■□□□□ 0.27
VRK3-219ENST00000600137 USP48Q86UV5 1035 aa16.75■□□□□ 0.27
VRK3-219ENST00000600137 LRP2BPQ9P2M1 347 aa16.75■□□□□ 0.27
VRK3-219ENST00000600137 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
VRK3-219ENST00000600137 GPR75-ASB3A0A0A6YYF3 556 aa16.74■□□□□ 0.27
VRK3-219ENST00000600137 GOLIM4O00461 696 aa16.74■□□□□ 0.27
VRK3-219ENST00000600137 TRAF5O00463 557 aa16.74■□□□□ 0.27
VRK3-219ENST00000600137 RBM5P52756 815 aaKnown RBP eCLIP16.74■□□□□ 0.27
VRK3-219ENST00000600137 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
VRK3-219ENST00000600137 OSBPL3Q9H4L5 887 aa16.74■□□□□ 0.27
VRK3-219ENST00000600137 PAG1Q9NWQ8 432 aa16.74■□□□□ 0.27
VRK3-219ENST00000600137 RAI14Q9P0K7 980 aa16.74■□□□□ 0.27
VRK3-219ENST00000600137 CLRN2A0PK11 232 aa16.73■□□□□ 0.27
VRK3-219ENST00000600137 ADM5C9JUS6 153 aa16.73■□□□□ 0.27
VRK3-219ENST00000600137 CHGBP05060 677 aa16.73■□□□□ 0.27
VRK3-219ENST00000600137 RHBDL3P58872 404 aa16.73■□□□□ 0.27
VRK3-219ENST00000600137 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
VRK3-219ENST00000600137 CDC42EP5Q6NZY7 148 aa16.73■□□□□ 0.27
VRK3-219ENST00000600137 CDC37L1Q7L3B6 337 aa16.73■□□□□ 0.27
VRK3-219ENST00000600137 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
VRK3-219ENST00000600137 DCPSQ96C86 337 aaKnown RBP16.73■□□□□ 0.27
VRK3-219ENST00000600137 MROH7-TTC4A0A0A0MT08 1334 aa16.72■□□□□ 0.27
VRK3-219ENST00000600137 TCRBV5S4A2TA0A5A2 114 aa16.72■□□□□ 0.27
VRK3-219ENST00000600137 NEFLP07196 543 aa16.72■□□□□ 0.27
VRK3-219ENST00000600137 TTF1Q15361 905 aaPredicted RBP16.72■□□□□ 0.27
VRK3-219ENST00000600137 KRT26Q7Z3Y9 468 aa16.72■□□□□ 0.27
VRK3-219ENST00000600137 MAST2Q6P0Q8 1798 aa16.72■□□□□ 0.27
VRK3-219ENST00000600137 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
VRK3-219ENST00000600137 GLRX3O76003 335 aaKnown RBP16.71■□□□□ 0.27
VRK3-219ENST00000600137 PPP4CP60510 307 aa16.71■□□□□ 0.27
VRK3-219ENST00000600137 SLFNL1Q499Z3 407 aa16.71■□□□□ 0.27
VRK3-219ENST00000600137 CST9Q5W186 159 aa16.71■□□□□ 0.27
VRK3-219ENST00000600137 NAA16Q6N069 864 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms