RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 INHBEP58166 350 aa17.26■□□□□ 0.35
IRF3-225ENST00000600022 SLFN5Q08AF3 891 aa17.26■□□□□ 0.35
IRF3-225ENST00000600022 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
IRF3-225ENST00000600022 DZIP1LQ8IYY4 767 aaKnown RBP17.26■□□□□ 0.35
IRF3-225ENST00000600022 CD99L2Q8TCZ2 262 aa17.26■□□□□ 0.35
IRF3-225ENST00000600022 SRCIN1Q9C0H9 1055 aa17.26■□□□□ 0.35
IRF3-225ENST00000600022 TMEM39BQ9GZU3 492 aa17.26■□□□□ 0.35
IRF3-225ENST00000600022 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
IRF3-225ENST00000600022 ALDH1L1O75891 902 aa17.25■□□□□ 0.35
IRF3-225ENST00000600022 ALDH1A1P00352 501 aa17.25■□□□□ 0.35
IRF3-225ENST00000600022 CACNB3P54284 484 aa17.25■□□□□ 0.35
IRF3-225ENST00000600022 UBE4AQ14139 1066 aa17.25■□□□□ 0.35
IRF3-225ENST00000600022 PRPF38BQ5VTL8 546 aaKnown RBP17.25■□□□□ 0.35
IRF3-225ENST00000600022 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.25■□□□□ 0.35
IRF3-225ENST00000600022 TRMT2AQ8IZ69 625 aaKnown RBP17.25■□□□□ 0.35
IRF3-225ENST00000600022 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
IRF3-225ENST00000600022 MS4A4AQ96JQ5 239 aa17.25■□□□□ 0.35
IRF3-225ENST00000600022 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
IRF3-225ENST00000600022 CRKP46108 304 aa17.24■□□□□ 0.35
IRF3-225ENST00000600022 IREB2P48200 963 aaKnown RBP17.24■□□□□ 0.35
IRF3-225ENST00000600022 FBXO33Q7Z6M2 555 aa17.24■□□□□ 0.35
IRF3-225ENST00000600022 ANKRD13AQ8IZ07 590 aa17.24■□□□□ 0.35
IRF3-225ENST00000600022 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
IRF3-225ENST00000600022 OPTNQ96CV9 577 aa17.24■□□□□ 0.35
IRF3-225ENST00000600022 BICC1Q9H694 974 aaKnown RBP17.24■□□□□ 0.35
IRF3-225ENST00000600022 SERPINA10Q9UK55 444 aa17.24■□□□□ 0.35
IRF3-225ENST00000600022 ECM29Q5VYK3 1845 aa17.24■□□□□ 0.35
IRF3-225ENST00000600022 TESPA1A2RU30 521 aaPredicted RBP17.23■□□□□ 0.35
IRF3-225ENST00000600022 CHAF1AQ13111 956 aaPredicted RBP17.23■□□□□ 0.35
IRF3-225ENST00000600022 BCAMP50895 628 aa17.22■□□□□ 0.35
IRF3-225ENST00000600022 BRI3BPQ8WY22 251 aa17.22■□□□□ 0.35
IRF3-225ENST00000600022 PTPN22Q9Y2R2 807 aa17.22■□□□□ 0.35
IRF3-225ENST00000600022 UTYO14607 1347 aa17.21■□□□□ 0.35
IRF3-225ENST00000600022 VGLL4Q14135 290 aa17.21■□□□□ 0.35
IRF3-225ENST00000600022 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
IRF3-225ENST00000600022 VGLL2Q8N8G2 317 aa17.21■□□□□ 0.35
IRF3-225ENST00000600022 UNCXA6NJT0 531 aa17.2■□□□□ 0.34
IRF3-225ENST00000600022 EN2P19622 333 aaPredicted RBP17.2■□□□□ 0.34
IRF3-225ENST00000600022 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
IRF3-225ENST00000600022 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
IRF3-225ENST00000600022 MROH5Q6ZUA9 1318 aa17.2■□□□□ 0.34
IRF3-225ENST00000600022 OTOFQ9HC10 1997 aa17.19■□□□□ 0.34
IRF3-225ENST00000600022 MAP3K9P80192 1104 aa17.19■□□□□ 0.34
IRF3-225ENST00000600022 SP3Q02447 781 aa17.19■□□□□ 0.34
IRF3-225ENST00000600022 METTL24Q5JXM2 366 aa17.19■□□□□ 0.34
IRF3-225ENST00000600022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.19■□□□□ 0.344e-6■■■■□ 20.6
IRF3-225ENST00000600022 EFCC1Q9HA90 598 aa17.19■□□□□ 0.34
IRF3-225ENST00000600022 CCL15-CCL14A0A0B4J2E2 113 aa17.18■□□□□ 0.34
IRF3-225ENST00000600022 PDE8BO95263 885 aa17.18■□□□□ 0.34
IRF3-225ENST00000600022 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
IRF3-225ENST00000600022 CCL15Q16663 113 aa17.18■□□□□ 0.34
IRF3-225ENST00000600022 APOBEC3HQ6NTF7 200 aaKnown RBP17.18■□□□□ 0.34
IRF3-225ENST00000600022 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
IRF3-225ENST00000600022 ZKSCAN4Q969J2 545 aaPredicted RBP17.18■□□□□ 0.34
IRF3-225ENST00000600022 OTUD5Q96G74 571 aa17.18■□□□□ 0.34
IRF3-225ENST00000600022 ERO1AQ96HE7 468 aa17.18■□□□□ 0.34
IRF3-225ENST00000600022 USP44Q9H0E7 712 aa17.18■□□□□ 0.34
IRF3-225ENST00000600022 OTUD7BQ6GQQ9 843 aa17.17■□□□□ 0.34
IRF3-225ENST00000600022 LAMB1P07942 1786 aa17.17■□□□□ 0.34
IRF3-225ENST00000600022 KIAA0100Q14667 2235 aaKnown RBP17.16■□□□□ 0.34
IRF3-225ENST00000600022 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
IRF3-225ENST00000600022 ECM2O94769 699 aaPredicted RBP17.16■□□□□ 0.34
IRF3-225ENST00000600022 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
IRF3-225ENST00000600022 ARHGAP39Q9C0H5 1083 aa17.16■□□□□ 0.34
IRF3-225ENST00000600022 SNCAIPQ9Y6H5 919 aa17.16■□□□□ 0.34
IRF3-225ENST00000600022 MYCP01106 439 aaPredicted RBP17.15■□□□□ 0.34
IRF3-225ENST00000600022 FGFR2P21802 821 aa17.15■□□□□ 0.34
IRF3-225ENST00000600022 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
IRF3-225ENST00000600022 TAF1CQ15572 869 aaPredicted RBP17.15■□□□□ 0.34
IRF3-225ENST00000600022 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
IRF3-225ENST00000600022 MIGA2Q7L4E1 593 aa17.15■□□□□ 0.34
IRF3-225ENST00000600022 TEKT1Q969V4 418 aa17.15■□□□□ 0.34
IRF3-225ENST00000600022 ARMC5Q96C12 935 aa17.15■□□□□ 0.34
IRF3-225ENST00000600022 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
IRF3-225ENST00000600022 TNNI2P48788 182 aa17.14■□□□□ 0.33
IRF3-225ENST00000600022 GTF2A2P52657 109 aa17.14■□□□□ 0.33
IRF3-225ENST00000600022 HDLBPQ00341 1268 aaKnown RBP17.14■□□□□ 0.33
IRF3-225ENST00000600022 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
IRF3-225ENST00000600022 ZDHHC15Q96MV8 337 aa17.14■□□□□ 0.33
IRF3-225ENST00000600022 PCDH10Q9P2E7 1040 aa17.14■□□□□ 0.33
IRF3-225ENST00000600022 PTCH2Q9Y6C5 1203 aa17.14■□□□□ 0.33
IRF3-225ENST00000600022 SPDYE5A6NIY4 337 aa17.13■□□□□ 0.33
IRF3-225ENST00000600022 BTBD19C9JJ37 291 aa17.13■□□□□ 0.33
IRF3-225ENST00000600022 IRF6O14896 467 aa17.13■□□□□ 0.33
IRF3-225ENST00000600022 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
IRF3-225ENST00000600022 WRNIP1Q96S55 665 aa17.13■□□□□ 0.33
IRF3-225ENST00000600022 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
IRF3-225ENST00000600022 CSADQ9Y600 493 aa17.13■□□□□ 0.33
IRF3-225ENST00000600022 INPP5BP32019 993 aa17.12■□□□□ 0.33
IRF3-225ENST00000600022 ATG9AQ7Z3C6 839 aa17.12■□□□□ 0.33
IRF3-225ENST00000600022 TBC1D22AQ8WUA7 517 aa17.12■□□□□ 0.33
IRF3-225ENST00000600022 ZNF333Q96JL9 665 aa17.12■□□□□ 0.33
IRF3-225ENST00000600022 ZSWIM8A7E2V4 1837 aa17.12■□□□□ 0.33
IRF3-225ENST00000600022 ARAP2Q8WZ64 1704 aa17.11■□□□□ 0.33
IRF3-225ENST00000600022 CTGFP29279 349 aa17.11■□□□□ 0.33
IRF3-225ENST00000600022 TCP10Q12799 353 aa17.11■□□□□ 0.33
IRF3-225ENST00000600022 DIXDC1Q155Q3 683 aa17.11■□□□□ 0.33
IRF3-225ENST00000600022 ZFPM1Q8IX07 1006 aa17.11■□□□□ 0.33
IRF3-225ENST00000600022 SH3TC2Q8TF17 1288 aa17.11■□□□□ 0.33
IRF3-225ENST00000600022 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms