RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 STMN2Q93045 179 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 JAG2Q9Y219 1238 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 NCOA1Q15788 1441 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 HGSO14964 777 aaPredicted RBP13.31□□□□□ -0.28
SCN8A-208ENST00000599343 CIB2O75838 187 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 RASA3Q14644 834 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
SCN8A-208ENST00000599343 NKIRAS1Q9NYS0 192 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 CPA1P15085 419 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
SCN8A-208ENST00000599343 ATP6V1AP38606 617 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 CCDC65Q8IXS2 484 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 SETDB2Q96T68 719 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 AFAP1L1Q8TED9 768 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 VEZTQ9HBM0 779 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 ALDH3A1P30838 453 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 TFCP2Q12800 502 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 GRM1Q13255 1194 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 CEP85LQ5SZL2 805 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 CNGA4Q8IV77 575 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 PPFIBP2Q8ND30 876 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 VPS16Q9H269 839 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCN8A-208ENST00000599343 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 SNX16P57768 344 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 UTP14CQ5TAP6 766 aaKnown RBP13.3□□□□□ -0.28
SCN8A-208ENST00000599343 KIAA1524Q8TCG1 905 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 KRT9P35527 623 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 TRAF1Q13077 416 aa13.3□□□□□ -0.28
SCN8A-208ENST00000599343 NOC4LQ9BVI4 516 aaKnown RBP13.3□□□□□ -0.28
SCN8A-208ENST00000599343 KSR2Q6VAB6 950 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 ZNF804AQ7Z570 1209 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCN8A-208ENST00000599343 HARSP12081 509 aaKnown RBP13.29□□□□□ -0.28
SCN8A-208ENST00000599343 IRX3P78415 501 aaPredicted RBP13.29□□□□□ -0.28
SCN8A-208ENST00000599343 MYL5Q02045 173 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 RASSF4Q9H2L5 321 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 CLGNO14967 610 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 INF2Q27J81 1249 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 GPIHBP1Q8IV16 184 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 GEN1Q17RS7 908 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 SEPT14Q6ZU15 432 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 IQUBQ8NA54 791 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 MSANTD4Q8NCY6 345 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 CCDC26Q8TAB7 109 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 TRAF5O00463 557 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 ALDH1L1O75891 902 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 HSPA1LP34931 641 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 TUBB4BP68371 445 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 LONRF3Q496Y0 759 aa13.29□□□□□ -0.28
SCN8A-208ENST00000599343 CEBPAP49715 358 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-208ENST00000599343 ATP11AP98196 1134 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 CWF19L2Q2TBE0 894 aaKnown RBP13.28□□□□□ -0.28
SCN8A-208ENST00000599343 IGSF22Q8N9C0 903 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 SPOPO43791 374 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
SCN8A-208ENST00000599343 SMC5Q8IY18 1101 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 PROCA1Q8NCQ7 364 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-208ENST00000599343 JAKMIP2Q96AA8 810 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 ELP1O95163 1332 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 SF3A3Q12874 501 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCN8A-208ENST00000599343 LETM2Q2VYF4 491 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 MAPK8IP1Q9UQF2 711 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 CRCPO75575 148 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 NCBP1Q09161 790 aaKnown RBP13.28□□□□□ -0.28
SCN8A-208ENST00000599343 SV2BQ7L1I2 683 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 NLRP3Q96P20 1036 aa13.28□□□□□ -0.28
SCN8A-208ENST00000599343 NAPGQ99747 312 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-208ENST00000599343 GNAT2P19087 354 aa13.27□□□□□ -0.28
SCN8A-208ENST00000599343 CEP85Q6P2H3 762 aa13.27□□□□□ -0.28
SCN8A-208ENST00000599343 TRIM31Q9BZY9 425 aa13.27□□□□□ -0.28
SCN8A-208ENST00000599343 MKRN1Q9UHC7 482 aaKnown RBP13.27□□□□□ -0.28
SCN8A-208ENST00000599343 NPHP3Q7Z494 1330 aa13.27□□□□□ -0.28
SCN8A-208ENST00000599343 GMNNO75496 209 aa13.27□□□□□ -0.28
SCN8A-208ENST00000599343 RBM26Q5T8P6 1007 aaKnown RBP13.27□□□□□ -0.28
SCN8A-208ENST00000599343 PFDN4Q9NQP4 134 aa13.27□□□□□ -0.28
SCN8A-208ENST00000599343 TTC41PQ6P2S7 1318 aa13.27□□□□□ -0.28
SCN8A-208ENST00000599343 BIRC3Q13489 604 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 IDI1Q13907 227 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 C8orf74Q6P047 294 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 ZNF526Q8TF50 670 aaPredicted RBP13.27□□□□□ -0.29
SCN8A-208ENST00000599343 RBSNQ9H1K0 784 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 FRMD4BQ9Y2L6 1034 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 BACH1O14867 736 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 EPB41P11171 864 aaKnown RBP13.27□□□□□ -0.29
SCN8A-208ENST00000599343 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.29
SCN8A-208ENST00000599343 ZCRB1Q8TBF4 217 aaKnown RBP13.27□□□□□ -0.29
SCN8A-208ENST00000599343 E7EVH7 732 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 TNFAIP3P21580 790 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 GNA11P29992 359 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 PCK1P35558 622 aa13.27□□□□□ -0.29
SCN8A-208ENST00000599343 CCDC110Q8TBZ0 833 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms