RNA–Protein interactions for RNA: ENST00000599225.1

LTBP4-225, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-225ENST00000599225 SPRYD7Q5W111 196 aa20.17■□□□□ 0.82
LTBP4-225ENST00000599225 MEIS3Q99687 375 aa20.17■□□□□ 0.82
LTBP4-225ENST00000599225 MCOLN1Q9GZU1 580 aa20.17■□□□□ 0.82
LTBP4-225ENST00000599225 COPRSQ9NQ92 184 aa20.17■□□□□ 0.82
LTBP4-225ENST00000599225 IPO8O15397 1037 aaKnown RBP20.16■□□□□ 0.82
LTBP4-225ENST00000599225 CHAF1AQ13111 956 aaPredicted RBP20.16■□□□□ 0.82
LTBP4-225ENST00000599225 PRKG1Q13976 671 aa20.16■□□□□ 0.82
LTBP4-225ENST00000599225 NBPF12Q5TAG4 269 aaPredicted RBP20.16■□□□□ 0.82
LTBP4-225ENST00000599225 TDRD3Q9H7E2 651 aaKnown RBP20.16■□□□□ 0.82
LTBP4-225ENST00000599225 GNAI3P08754 354 aa20.15■□□□□ 0.82
LTBP4-225ENST00000599225 IL15P40933 162 aaPredicted RBP20.15■□□□□ 0.82
LTBP4-225ENST00000599225 SREBF2Q12772 1141 aa20.15■□□□□ 0.82
LTBP4-225ENST00000599225 MTX1Q13505 466 aa20.15■□□□□ 0.82
LTBP4-225ENST00000599225 NOM1Q5C9Z4 860 aaKnown RBP20.15■□□□□ 0.82
LTBP4-225ENST00000599225 ZDHHC15Q96MV8 337 aa20.15■□□□□ 0.82
LTBP4-225ENST00000599225 TEPSINQ96N21 525 aa20.15■□□□□ 0.82
LTBP4-225ENST00000599225 CFHR5Q9BXR6 569 aa20.15■□□□□ 0.82
LTBP4-225ENST00000599225 CEP126Q9P2H0 1117 aa20.15■□□□□ 0.82
LTBP4-225ENST00000599225 FZD1Q9UP38 647 aa20.15■□□□□ 0.82
LTBP4-225ENST00000599225 USP2O75604 605 aaPredicted RBP20.14■□□□□ 0.81
LTBP4-225ENST00000599225 ZBTB48P10074 688 aaPredicted RBP20.14■□□□□ 0.81
LTBP4-225ENST00000599225 TRIM27P14373 513 aa20.14■□□□□ 0.81
LTBP4-225ENST00000599225 MIER1Q8N108 512 aa20.14■□□□□ 0.81
LTBP4-225ENST00000599225 WDR66Q8TBY9 1149 aa20.14■□□□□ 0.81
LTBP4-225ENST00000599225 TEKT1Q969V4 418 aa20.14■□□□□ 0.81
LTBP4-225ENST00000599225 SLC10A4Q96EP9 437 aa20.14■□□□□ 0.81
LTBP4-225ENST00000599225 MAST3O60307 1309 aa20.13■□□□□ 0.81
LTBP4-225ENST00000599225 IREB2P48200 963 aaKnown RBP20.13■□□□□ 0.81
LTBP4-225ENST00000599225 INHBEP58166 350 aa20.13■□□□□ 0.81
LTBP4-225ENST00000599225 ATP2B3Q16720 1220 aa20.13■□□□□ 0.81
LTBP4-225ENST00000599225 HHIPL2Q6UWX4 724 aa20.13■□□□□ 0.81
LTBP4-225ENST00000599225 ATF7IPQ6VMQ6 1270 aa20.13■□□□□ 0.81
LTBP4-225ENST00000599225 SIL1Q9H173 461 aa20.13■□□□□ 0.81
LTBP4-225ENST00000599225 BCAR3O75815 825 aa20.12■□□□□ 0.81
LTBP4-225ENST00000599225 DGKZQ13574 1117 aa20.12■□□□□ 0.81
LTBP4-225ENST00000599225 FKBP1CQ5VVH2 108 aa20.12■□□□□ 0.81
LTBP4-225ENST00000599225 APOBEC3HQ6NTF7 200 aaKnown RBP20.12■□□□□ 0.81
LTBP4-225ENST00000599225 CLMNQ96JQ2 1002 aa20.12■□□□□ 0.81
LTBP4-225ENST00000599225 PA2G4Q9UQ80 394 aaKnown RBP20.12■□□□□ 0.81
LTBP4-225ENST00000599225 MANSC4A6NHS7 340 aaPredicted RBP20.11■□□□□ 0.81
LTBP4-225ENST00000599225 TNNI2P48788 182 aa20.11■□□□□ 0.81
LTBP4-225ENST00000599225 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
LTBP4-225ENST00000599225 ANKRD13AQ8IZ07 590 aa20.11■□□□□ 0.81
LTBP4-225ENST00000599225 TCP10L2B9ZVM9 353 aa20.1■□□□□ 0.81
LTBP4-225ENST00000599225 SEMA3EO15041 775 aa20.1■□□□□ 0.81
LTBP4-225ENST00000599225 MKRN3Q13064 507 aaKnown RBP20.1■□□□□ 0.81
LTBP4-225ENST00000599225 FAM83AQ86UY5 434 aa20.1■□□□□ 0.81
LTBP4-225ENST00000599225 WNK4Q96J92 1243 aa20.1■□□□□ 0.81
LTBP4-225ENST00000599225 TMEM39BQ9GZU3 492 aa20.1■□□□□ 0.81
LTBP4-225ENST00000599225 GNL3LQ9NVN8 582 aaKnown RBP20.1■□□□□ 0.81
LTBP4-225ENST00000599225 SALL1Q9NSC2 1324 aa20.09■□□□□ 0.81
LTBP4-225ENST00000599225 TBC1D8O95759 1140 aa20.09■□□□□ 0.81
LTBP4-225ENST00000599225 ALDH1A1P00352 501 aa20.09■□□□□ 0.81
LTBP4-225ENST00000599225 RGS19P49795 217 aa20.09■□□□□ 0.81
LTBP4-225ENST00000599225 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
LTBP4-225ENST00000599225 LAMB1P07942 1786 aa20.08■□□□□ 0.81
LTBP4-225ENST00000599225 SRGAP3O43295 1099 aa20.08■□□□□ 0.81
LTBP4-225ENST00000599225 CTU1Q7Z7A3 348 aaKnown RBP20.08■□□□□ 0.81
LTBP4-225ENST00000599225 CCDC85CA6NKD9 419 aa20.07■□□□□ 0.8
LTBP4-225ENST00000599225 GPR25O00155 361 aa20.07■□□□□ 0.8
LTBP4-225ENST00000599225 GJA5P36382 358 aa20.07■□□□□ 0.8
LTBP4-225ENST00000599225 PHKA1P46020 1223 aa20.07■□□□□ 0.8
LTBP4-225ENST00000599225 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
LTBP4-225ENST00000599225 IFNL1Q8IU54 200 aa20.07■□□□□ 0.8
LTBP4-225ENST00000599225 ZNF296Q8WUU4 475 aaPredicted RBP20.07■□□□□ 0.8
LTBP4-225ENST00000599225 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
LTBP4-225ENST00000599225 DENND2AQ9ULE3 1009 aa20.07■□□□□ 0.8
LTBP4-225ENST00000599225 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
LTBP4-225ENST00000599225 HTTP42858 3142 aa20.07■□□□□ 0.8
LTBP4-225ENST00000599225 PDS5AQ29RF7 1337 aaKnown RBP20.06■□□□□ 0.8
LTBP4-225ENST00000599225 TESPA1A2RU30 521 aaPredicted RBP20.06■□□□□ 0.8
LTBP4-225ENST00000599225 GNAI2P04899 355 aa20.06■□□□□ 0.8
LTBP4-225ENST00000599225 CCDC102BQ68D86 513 aa20.06■□□□□ 0.8
LTBP4-225ENST00000599225 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.06■□□□□ 0.8
LTBP4-225ENST00000599225 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.06■□□□□ 0.89e-14■■■□□ 15.1
LTBP4-225ENST00000599225 TMOD2Q9NZR1 351 aa20.06■□□□□ 0.8
LTBP4-225ENST00000599225 PRDX5P30044 214 aa20.05■□□□□ 0.8
LTBP4-225ENST00000599225 ADORA1P30542 326 aa20.05■□□□□ 0.8
LTBP4-225ENST00000599225 CACNB3P54284 484 aa20.05■□□□□ 0.8
LTBP4-225ENST00000599225 TIMM10P62072 90 aa20.05■□□□□ 0.8
LTBP4-225ENST00000599225 PKN2Q16513 984 aaKnown RBP20.05■□□□□ 0.8
LTBP4-225ENST00000599225 ZKSCAN2Q63HK3 967 aa20.05■□□□□ 0.8
LTBP4-225ENST00000599225 AKAP2Q9Y2D5 859 aa20.05■□□□□ 0.8
LTBP4-225ENST00000599225 RPAP1Q9BWH6 1393 aaPredicted RBP20.05■□□□□ 0.8
LTBP4-225ENST00000599225 MYH13Q9UKX3 1938 aa20.04■□□□□ 0.8
LTBP4-225ENST00000599225 IGF2BP3O00425 579 aaKnown RBP eCLIP20.04■□□□□ 0.8
LTBP4-225ENST00000599225 LDHBP07195 334 aaKnown RBP20.04■□□□□ 0.8
LTBP4-225ENST00000599225 MAP3K9P80192 1104 aa20.04■□□□□ 0.8
LTBP4-225ENST00000599225 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
LTBP4-225ENST00000599225 HOOK2Q96ED9 719 aa20.04■□□□□ 0.8
LTBP4-225ENST00000599225 R3HDMLQ9H3Y0 253 aa20.04■□□□□ 0.8
LTBP4-225ENST00000599225 DAGLAQ9Y4D2 1042 aa20.04■□□□□ 0.8
LTBP4-225ENST00000599225 TFCP2Q12800 502 aa20.03■□□□□ 0.8
LTBP4-225ENST00000599225 VGLL4Q14135 290 aa20.03■□□□□ 0.8
LTBP4-225ENST00000599225 OPTNQ96CV9 577 aa20.03■□□□□ 0.8
LTBP4-225ENST00000599225 MS4A4AQ96JQ5 239 aa20.03■□□□□ 0.8
LTBP4-225ENST00000599225 OTOFQ9HC10 1997 aa20.03■□□□□ 0.8
LTBP4-225ENST00000599225 PNMA6EA0A0J9YXQ4 647 aa20.02■□□□□ 0.8
LTBP4-225ENST00000599225 A0A1B0GUL7 405 aa20.02■□□□□ 0.8
LTBP4-225ENST00000599225 RASGRF1Q13972 1273 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms