RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 TCRBV5S4A2TA0A5A2 114 aa22.9■■□□□ 1.26
GRAMD1A-207ENST00000598118 ERVV-1B6SEH8 477 aa22.9■■□□□ 1.26
GRAMD1A-207ENST00000598118 SNAP23O00161 211 aa22.9■■□□□ 1.26
GRAMD1A-207ENST00000598118 EXOC5O00471 708 aa22.9■■□□□ 1.26
GRAMD1A-207ENST00000598118 DHX16O60231 1041 aaKnown RBP22.9■■□□□ 1.26
GRAMD1A-207ENST00000598118 CCDC186Q7Z3E2 898 aa22.9■■□□□ 1.26
GRAMD1A-207ENST00000598118 LINC00301Q8NCQ3 95 aa22.9■■□□□ 1.26
GRAMD1A-207ENST00000598118 WDR19Q8NEZ3 1342 aa22.9■■□□□ 1.26
GRAMD1A-207ENST00000598118 PDE6AP16499 860 aa22.89■■□□□ 1.26
GRAMD1A-207ENST00000598118 IL6STP40189 918 aaPredicted RBP22.89■■□□□ 1.26
GRAMD1A-207ENST00000598118 COL14A1Q05707 1796 aaKnown RBP22.89■■□□□ 1.25
GRAMD1A-207ENST00000598118 KIF28PB7ZC32 967 aa22.89■■□□□ 1.25
GRAMD1A-207ENST00000598118 CPLX1O14810 134 aa22.89■■□□□ 1.25
GRAMD1A-207ENST00000598118 KINO60870 393 aaKnown RBP22.89■■□□□ 1.25
GRAMD1A-207ENST00000598118 APPP05067 770 aa22.89■■□□□ 1.25
GRAMD1A-207ENST00000598118 FGFR2P21802 821 aa22.89■■□□□ 1.25
GRAMD1A-207ENST00000598118 SENP2Q9HC62 589 aa22.89■■□□□ 1.25
GRAMD1A-207ENST00000598118 FAM13BQ9NYF5 915 aa22.89■■□□□ 1.25
GRAMD1A-207ENST00000598118 FMR1NBQ8N0W7 255 aaPredicted RBP22.88■■□□□ 1.25
GRAMD1A-207ENST00000598118 A0A1B0GVL5 298 aa22.88■■□□□ 1.25
GRAMD1A-207ENST00000598118 DYNC1I1O14576 645 aa22.88■■□□□ 1.25
GRAMD1A-207ENST00000598118 CAVIN2O95810 425 aa22.88■■□□□ 1.25
GRAMD1A-207ENST00000598118 LRMPQ12912 555 aa22.88■■□□□ 1.25
GRAMD1A-207ENST00000598118 STX1AQ16623 288 aa22.88■■□□□ 1.25
GRAMD1A-207ENST00000598118 ADALQ6DHV7 355 aa22.88■■□□□ 1.25
GRAMD1A-207ENST00000598118 DRC7Q8IY82 874 aa22.88■■□□□ 1.25
GRAMD1A-207ENST00000598118 LRP5O75197 1615 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 RXRAP19793 462 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 TRDNQ13061 729 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 PUM3Q15397 648 aaKnown RBP22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 MYRIPQ8NFW9 859 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 AIFM3Q96NN9 605 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 INCENPQ9NQS7 918 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 ANGEL1Q9UNK9 670 aaKnown RBP22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 MYSM1Q5VVJ2 828 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 SUSD4Q5VX71 490 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 DOT1LQ8TEK3 1739 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 ARAP2Q8WZ64 1704 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 LPIN2Q92539 896 aa22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 MRPS27Q92552 414 aaKnown RBP22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 STRBPQ96SI9 672 aaKnown RBP22.87■■□□□ 1.25
GRAMD1A-207ENST00000598118 PLCH1Q4KWH8 1693 aa22.86■■□□□ 1.25
GRAMD1A-207ENST00000598118 KDM4FA0A1W2PPD8 638 aa22.86■■□□□ 1.25
GRAMD1A-207ENST00000598118 B4E1Z4 1266 aa22.86■■□□□ 1.25
GRAMD1A-207ENST00000598118 SH2B2O14492 632 aaPredicted RBP22.86■■□□□ 1.25
GRAMD1A-207ENST00000598118 NDUFA8P51970 172 aa22.86■■□□□ 1.25
GRAMD1A-207ENST00000598118 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.86■■□□□ 1.25
GRAMD1A-207ENST00000598118 POLR3EQ9NVU0 708 aa22.86■■□□□ 1.25
GRAMD1A-207ENST00000598118 FAM177BA6PVY3 158 aa22.85■■□□□ 1.25
GRAMD1A-207ENST00000598118 UQCRFS1P1P0C7P4 283 aa22.85■■□□□ 1.25
GRAMD1A-207ENST00000598118 NEDD4P46934 1319 aa22.85■■□□□ 1.25
GRAMD1A-207ENST00000598118 KIF23Q02241 960 aaPredicted RBP22.85■■□□□ 1.25
GRAMD1A-207ENST00000598118 STK38Q15208 465 aa22.85■■□□□ 1.25
GRAMD1A-207ENST00000598118 SEC31BQ9NQW1 1179 aa22.85■■□□□ 1.25
GRAMD1A-207ENST00000598118 ZMYM6O95789 1325 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 MROH5Q6ZUA9 1318 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 COL16A1Q07092 1604 aaPredicted RBP22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 CHD4Q14839 1912 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 A0A1W2PQ27 194 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 A0A1W2PQ64 194 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 A0A1W2PQD8 194 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 CDC27P30260 824 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 EIF5P55010 431 aaKnown RBP22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 CCDC144BQ3MJ40 725 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 DHX40Q8IX18 779 aaKnown RBP22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 CCDC144CPQ8IYA2 1237 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 SPATA5Q8NB90 893 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 PRIMPOLQ96LW4 560 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 DOCK2Q92608 1830 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 WNK3Q9BYP7 1800 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 RASGRF1Q13972 1273 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 INTS5Q6P9B9 1019 aaKnown RBP22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 BRAPQ7Z569 592 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 AIDAQ96BJ3 306 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 PDCL3Q9H2J4 239 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 EPB41L4AQ9HCS5 686 aaPredicted RBP22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 CLIP2Q9UDT6 1046 aa22.84■■□□□ 1.25
GRAMD1A-207ENST00000598118 GOLGA6L19H0YKK7 550 aa22.83■■□□□ 1.25
GRAMD1A-207ENST00000598118 YEATS4O95619 227 aa22.83■■□□□ 1.25
GRAMD1A-207ENST00000598118 APOA5Q6Q788 366 aa22.83■■□□□ 1.25
GRAMD1A-207ENST00000598118 TACC3Q9Y6A5 838 aa22.83■■□□□ 1.25
GRAMD1A-207ENST00000598118 ECM29Q5VYK3 1845 aa22.83■■□□□ 1.25
GRAMD1A-207ENST00000598118 SPTLC2O15270 562 aa22.83■■□□□ 1.24
GRAMD1A-207ENST00000598118 METAP2P50579 478 aaKnown RBP eCLIP22.83■■□□□ 1.243e-6■■■□□ 17
GRAMD1A-207ENST00000598118 SF3A1Q15459 793 aaKnown RBP22.83■■□□□ 1.24
GRAMD1A-207ENST00000598118 SARM1Q6SZW1 724 aa22.83■■□□□ 1.24
GRAMD1A-207ENST00000598118 IGDCC4Q8TDY8 1250 aa22.83■■□□□ 1.24
GRAMD1A-207ENST00000598118 FBXW7Q969H0 707 aa22.83■■□□□ 1.24
GRAMD1A-207ENST00000598118 MAGEB6Q8N7X4 407 aa22.82■■□□□ 1.24
GRAMD1A-207ENST00000598118 KCNG4Q8TDN1 519 aa22.82■■□□□ 1.24
GRAMD1A-207ENST00000598118 TSC1Q92574 1164 aa22.82■■□□□ 1.24
GRAMD1A-207ENST00000598118 ANO10Q9NW15 660 aa22.82■■□□□ 1.24
GRAMD1A-207ENST00000598118 PHKBQ93100 1093 aa22.82■■□□□ 1.24
GRAMD1A-207ENST00000598118 MYH14Q7Z406 1995 aaKnown RBP22.81■■□□□ 1.24
GRAMD1A-207ENST00000598118 SLC5A1P13866 664 aa22.81■■□□□ 1.24
GRAMD1A-207ENST00000598118 MICU3Q86XE3 530 aa22.81■■□□□ 1.24
GRAMD1A-207ENST00000598118 IFNL3Q8IZI9 196 aa22.81■■□□□ 1.24
GRAMD1A-207ENST00000598118 CACTINQ8WUQ7 758 aaKnown RBP22.81■■□□□ 1.24
GRAMD1A-207ENST00000598118 SDF4Q9BRK5 362 aa22.81■■□□□ 1.24
GRAMD1A-207ENST00000598118 ALG1Q9BT22 464 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms