RNA–Protein interactions for RNA: ENST00000597466.1

SHD-203, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 2

Gene SHD, Length 289 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-203ENST00000597466 DZIP1LQ8IYY4 767 aaKnown RBP13.75□□□□□ -0.21
SHD-203ENST00000597466 ANKRD13AQ8IZ07 590 aa13.75□□□□□ -0.21
SHD-203ENST00000597466 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
SHD-203ENST00000597466 BICC1Q9H694 974 aaKnown RBP13.75□□□□□ -0.21
SHD-203ENST00000597466 SERPINA10Q9UK55 444 aa13.75□□□□□ -0.21
SHD-203ENST00000597466 RIPOR2Q9Y4F9 1068 aa13.75□□□□□ -0.21
SHD-203ENST00000597466 CRKP46108 304 aa13.74□□□□□ -0.21
SHD-203ENST00000597466 CHAF1AQ13111 956 aaPredicted RBP13.74□□□□□ -0.21
SHD-203ENST00000597466 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.74□□□□□ -0.21
SHD-203ENST00000597466 FAM9BQ8IZU0 186 aa13.74□□□□□ -0.21
SHD-203ENST00000597466 ANKRD44Q8N8A2 993 aa13.74□□□□□ -0.21
SHD-203ENST00000597466 KLHDC4Q8TBB5 520 aa13.74□□□□□ -0.21
SHD-203ENST00000597466 MS4A4AQ96JQ5 239 aa13.74□□□□□ -0.21
SHD-203ENST00000597466 KIAA0100Q14667 2235 aaKnown RBP13.74□□□□□ -0.21
SHD-203ENST00000597466 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
SHD-203ENST00000597466 UNCXA6NJT0 531 aa13.73□□□□□ -0.21
SHD-203ENST00000597466 ANP32CO43423 234 aa13.73□□□□□ -0.21
SHD-203ENST00000597466 VGLL4Q14135 290 aa13.73□□□□□ -0.21
SHD-203ENST00000597466 BRI3BPQ8WY22 251 aa13.73□□□□□ -0.21
SHD-203ENST00000597466 PTPN22Q9Y2R2 807 aa13.73□□□□□ -0.21
SHD-203ENST00000597466 ZSWIM8A7E2V4 1837 aa13.73□□□□□ -0.21
SHD-203ENST00000597466 UTYO14607 1347 aa13.72□□□□□ -0.21
SHD-203ENST00000597466 TNFAIP1Q13829 316 aa13.72□□□□□ -0.21
SHD-203ENST00000597466 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
SHD-203ENST00000597466 FBXO33Q7Z6M2 555 aa13.72□□□□□ -0.21
SHD-203ENST00000597466 VGLL2Q8N8G2 317 aa13.72□□□□□ -0.21
SHD-203ENST00000597466 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHD-203ENST00000597466 ERO1AQ96HE7 468 aa13.72□□□□□ -0.21
SHD-203ENST00000597466 MROH5Q6ZUA9 1318 aa13.71□□□□□ -0.21
SHD-203ENST00000597466 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
SHD-203ENST00000597466 FAM43AQ8N2R8 423 aa13.71□□□□□ -0.21
SHD-203ENST00000597466 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
SHD-203ENST00000597466 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
SHD-203ENST00000597466 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.22
SHD-203ENST00000597466 CCL15-CCL14A0A0B4J2E2 113 aa13.7□□□□□ -0.22
SHD-203ENST00000597466 BCAMP50895 628 aa13.7□□□□□ -0.22
SHD-203ENST00000597466 SP3Q02447 781 aa13.7□□□□□ -0.22
SHD-203ENST00000597466 CCL15Q16663 113 aa13.7□□□□□ -0.22
SHD-203ENST00000597466 METTL24Q5JXM2 366 aa13.7□□□□□ -0.22
SHD-203ENST00000597466 MRPL50Q8N5N7 158 aaKnown RBP13.7□□□□□ -0.22
SHD-203ENST00000597466 SNCAIPQ9Y6H5 919 aa13.7□□□□□ -0.22
SHD-203ENST00000597466 EN2P19622 333 aaPredicted RBP13.69□□□□□ -0.22
SHD-203ENST00000597466 MAP3K9P80192 1104 aa13.69□□□□□ -0.22
SHD-203ENST00000597466 OTUD7BQ6GQQ9 843 aa13.69□□□□□ -0.22
SHD-203ENST00000597466 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
SHD-203ENST00000597466 ZKSCAN4Q969J2 545 aaPredicted RBP13.69□□□□□ -0.22
SHD-203ENST00000597466 ARMC5Q96C12 935 aa13.69□□□□□ -0.22
SHD-203ENST00000597466 PDE8BO95263 885 aa13.68□□□□□ -0.22
SHD-203ENST00000597466 TNNI2P48788 182 aa13.68□□□□□ -0.22
SHD-203ENST00000597466 TAF1CQ15572 869 aaPredicted RBP13.68□□□□□ -0.22
SHD-203ENST00000597466 APOBEC3HQ6NTF7 200 aaKnown RBP13.68□□□□□ -0.22
SHD-203ENST00000597466 TEKT1Q969V4 418 aa13.68□□□□□ -0.22
SHD-203ENST00000597466 ARHGAP39Q9C0H5 1083 aa13.68□□□□□ -0.22
SHD-203ENST00000597466 PCDH10Q9P2E7 1040 aa13.68□□□□□ -0.22
SHD-203ENST00000597466 PTCH2Q9Y6C5 1203 aa13.68□□□□□ -0.22
SHD-203ENST00000597466 SPDYE5A6NIY4 337 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
SHD-203ENST00000597466 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
SHD-203ENST00000597466 MYCP01106 439 aaPredicted RBP13.67□□□□□ -0.22
SHD-203ENST00000597466 FGFR2P21802 821 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 GTF2A2P52657 109 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 CAVIN4Q5BKX8 364 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 INTS3Q68E01 1043 aaKnown RBP13.67□□□□□ -0.22
SHD-203ENST00000597466 ZNF333Q96JL9 665 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 ZDHHC15Q96MV8 337 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 WRNIP1Q96S55 665 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 USP44Q9H0E7 712 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 CSADQ9Y600 493 aa13.67□□□□□ -0.22
SHD-203ENST00000597466 CEP290O15078 2479 aa13.66□□□□□ -0.22
SHD-203ENST00000597466 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
SHD-203ENST00000597466 IRF6O14896 467 aa13.66□□□□□ -0.22
SHD-203ENST00000597466 RFX5P48382 616 aaPredicted RBP13.66□□□□□ -0.22
SHD-203ENST00000597466 TBC1D22AQ8WUA7 517 aa13.66□□□□□ -0.22
SHD-203ENST00000597466 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
SHD-203ENST00000597466 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
SHD-203ENST00000597466 SZT2Q5T011 3432 aa13.65□□□□□ -0.22
SHD-203ENST00000597466 MYH13Q9UKX3 1938 aa13.65□□□□□ -0.22
SHD-203ENST00000597466 INPP5BP32019 993 aa13.65□□□□□ -0.22
SHD-203ENST00000597466 HDLBPQ00341 1268 aaKnown RBP13.65□□□□□ -0.22
SHD-203ENST00000597466 PUM3Q15397 648 aaKnown RBP13.65□□□□□ -0.22
SHD-203ENST00000597466 MIGA2Q7L4E1 593 aa13.65□□□□□ -0.22
SHD-203ENST00000597466 ZFYVE28Q9HCC9 887 aa13.65□□□□□ -0.22
SHD-203ENST00000597466 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
SHD-203ENST00000597466 DIXDC1Q155Q3 683 aa13.64□□□□□ -0.23
SHD-203ENST00000597466 ERO1BQ86YB8 467 aa13.64□□□□□ -0.23
SHD-203ENST00000597466 SH3TC2Q8TF17 1288 aa13.64□□□□□ -0.23
SHD-203ENST00000597466 PTPRCP08575 1304 aa13.64□□□□□ -0.23
SHD-203ENST00000597466 RPAP1Q9BWH6 1393 aaPredicted RBP13.63□□□□□ -0.23
SHD-203ENST00000597466 TLR2O60603 784 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 CTGFP29279 349 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 NFIAQ12857 509 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 SLC9C1Q4G0N8 1177 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 HABP4Q5JVS0 413 aaKnown RBP13.63□□□□□ -0.23
SHD-203ENST00000597466 ATG9AQ7Z3C6 839 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 FAM83AQ86UY5 434 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 TMOD2Q9NZR1 351 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 DAGLAQ9Y4D2 1042 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 KIF16BQ96L93 1317 aa13.63□□□□□ -0.23
SHD-203ENST00000597466 EYA2O00167 538 aa13.62□□□□□ -0.23
SHD-203ENST00000597466 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms