RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 NBPF9Q3BBW0 867 aa17.55■□□□□ 0.4
LIG1-208ENST00000595758 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
LIG1-208ENST00000595758 ZBED3Q96IU2 234 aaPredicted RBP17.55■□□□□ 0.4
LIG1-208ENST00000595758 MRIQ9BWK5 157 aa17.55■□□□□ 0.4
LIG1-208ENST00000595758 ADAMTSL1Q8N6G6 1762 aa17.55■□□□□ 0.4
LIG1-208ENST00000595758 ASTN2O75129 1339 aaPredicted RBP17.54■□□□□ 0.4
LIG1-208ENST00000595758 PRDX5P30044 214 aa17.54■□□□□ 0.4
LIG1-208ENST00000595758 TBC1D9Q6ZT07 1266 aa17.54■□□□□ 0.4
LIG1-208ENST00000595758 SMC5Q8IY18 1101 aa17.54■□□□□ 0.4
LIG1-208ENST00000595758 TEKT1Q969V4 418 aa17.54■□□□□ 0.4
LIG1-208ENST00000595758 DCPSQ96C86 337 aaKnown RBP17.54■□□□□ 0.4
LIG1-208ENST00000595758 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
LIG1-208ENST00000595758 ITGBL1O95965 494 aaPredicted RBP17.53■□□□□ 0.4
LIG1-208ENST00000595758 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
LIG1-208ENST00000595758 ZAP70P43403 619 aa17.53■□□□□ 0.4
LIG1-208ENST00000595758 ANGEL2Q5VTE6 544 aaKnown RBP17.53■□□□□ 0.4
LIG1-208ENST00000595758 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
LIG1-208ENST00000595758 PRMT6Q96LA8 375 aaPredicted RBP17.53■□□□□ 0.4
LIG1-208ENST00000595758 GGA3Q9NZ52 723 aa17.53■□□□□ 0.4
LIG1-208ENST00000595758 PCDHAC2Q9Y5I4 1007 aa17.53■□□□□ 0.4
LIG1-208ENST00000595758 MYO1BO43795 1136 aa17.52■□□□□ 0.4
LIG1-208ENST00000595758 CYP2E1P05181 493 aaPredicted RBP17.52■□□□□ 0.4
LIG1-208ENST00000595758 NEFLP07196 543 aa17.52■□□□□ 0.4
LIG1-208ENST00000595758 ATP5JP18859 108 aa17.52■□□□□ 0.4
LIG1-208ENST00000595758 HHIPL2Q6UWX4 724 aa17.52■□□□□ 0.4
LIG1-208ENST00000595758 CDC37L1Q7L3B6 337 aa17.52■□□□□ 0.4
LIG1-208ENST00000595758 DZIP1Q86YF9 867 aaKnown RBP17.52■□□□□ 0.4
LIG1-208ENST00000595758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.52■□□□□ 0.4
LIG1-208ENST00000595758 GPATCH3Q96I76 525 aa17.52■□□□□ 0.4
LIG1-208ENST00000595758 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.4
LIG1-208ENST00000595758 LRP2BPQ9P2M1 347 aa17.52■□□□□ 0.4
LIG1-208ENST00000595758 DIXDC1Q155Q3 683 aa17.51■□□□□ 0.39
LIG1-208ENST00000595758 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
LIG1-208ENST00000595758 KRT26Q7Z3Y9 468 aa17.51■□□□□ 0.39
LIG1-208ENST00000595758 USP48Q86UV5 1035 aa17.51■□□□□ 0.39
LIG1-208ENST00000595758 SULF1Q8IWU6 871 aa17.51■□□□□ 0.39
LIG1-208ENST00000595758 ZDHHC15Q96MV8 337 aa17.51■□□□□ 0.39
LIG1-208ENST00000595758 GLIS2Q9BZE0 524 aaPredicted RBP17.51■□□□□ 0.39
LIG1-208ENST00000595758 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
LIG1-208ENST00000595758 PITPNM2Q9BZ72 1349 aa17.5■□□□□ 0.39
LIG1-208ENST00000595758 MECOMQ03112 1051 aa17.5■□□□□ 0.39
LIG1-208ENST00000595758 SLF2Q8IX21 1173 aa17.5■□□□□ 0.39
LIG1-208ENST00000595758 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
LIG1-208ENST00000595758 PIH1D3Q9NQM4 214 aaKnown RBP17.5■□□□□ 0.39
LIG1-208ENST00000595758 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
LIG1-208ENST00000595758 AKAP11Q9UKA4 1901 aa17.49■□□□□ 0.39
LIG1-208ENST00000595758 CLRN2A0PK11 232 aa17.49■□□□□ 0.39
LIG1-208ENST00000595758 TRAF5O00463 557 aa17.49■□□□□ 0.39
LIG1-208ENST00000595758 GSTO1P78417 241 aa17.49■□□□□ 0.39
LIG1-208ENST00000595758 APOBEC3HQ6NTF7 200 aaKnown RBP17.49■□□□□ 0.39
LIG1-208ENST00000595758 OTUD7AQ8TE49 926 aaPredicted RBP17.49■□□□□ 0.39
LIG1-208ENST00000595758 DNAJC2Q99543 621 aaKnown RBP17.49■□□□□ 0.39
LIG1-208ENST00000595758 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
LIG1-208ENST00000595758 AOX1Q06278 1338 aa17.48■□□□□ 0.39
LIG1-208ENST00000595758 PASKQ96RG2 1323 aa17.48■□□□□ 0.39
LIG1-208ENST00000595758 ADM5C9JUS6 153 aa17.48■□□□□ 0.39
LIG1-208ENST00000595758 LDHCP07864 332 aa17.48■□□□□ 0.39
LIG1-208ENST00000595758 NUCB1Q02818 461 aa17.48■□□□□ 0.39
LIG1-208ENST00000595758 TTF1Q15361 905 aaPredicted RBP17.48■□□□□ 0.39
LIG1-208ENST00000595758 APOBEC3FQ8IUX4 373 aaKnown RBP17.48■□□□□ 0.39
LIG1-208ENST00000595758 NSUN4Q96CB9 384 aaKnown RBP17.48■□□□□ 0.39
LIG1-208ENST00000595758 FAM163AQ96GL9 167 aaPredicted RBP17.48■□□□□ 0.39
LIG1-208ENST00000595758 HAUS7Q99871 368 aa17.48■□□□□ 0.39
LIG1-208ENST00000595758 LNPKQ9C0E8 428 aa17.48■□□□□ 0.39
LIG1-208ENST00000595758 ANTXR1Q9H6X2 564 aa17.48■□□□□ 0.39
LIG1-208ENST00000595758 TDRD3Q9H7E2 651 aaKnown RBP17.48■□□□□ 0.39
LIG1-208ENST00000595758 ZNF70Q9UC06 446 aaPredicted RBP17.48■□□□□ 0.39
LIG1-208ENST00000595758 GOLIM4O00461 696 aa17.47■□□□□ 0.39
LIG1-208ENST00000595758 IGSF3O75054 1194 aa17.47■□□□□ 0.39
LIG1-208ENST00000595758 IDH1O75874 414 aaKnown RBP17.47■□□□□ 0.39
LIG1-208ENST00000595758 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
LIG1-208ENST00000595758 CHD1LQ86WJ1 897 aa17.47■□□□□ 0.39
LIG1-208ENST00000595758 ZNF384Q8TF68 577 aa17.47■□□□□ 0.39
LIG1-208ENST00000595758 VEZTQ9HBM0 779 aa17.47■□□□□ 0.39
LIG1-208ENST00000595758 SCAF8Q9UPN6 1271 aaKnown RBP17.47■□□□□ 0.39
LIG1-208ENST00000595758 TTC41PQ6P2S7 1318 aa17.47■□□□□ 0.39
LIG1-208ENST00000595758 POLR2AP24928 1970 aaKnown RBP17.46■□□□□ 0.39
LIG1-208ENST00000595758 HSPA6P17066 643 aa17.46■□□□□ 0.39
LIG1-208ENST00000595758 MX1P20591 662 aa17.46■□□□□ 0.39
LIG1-208ENST00000595758 APLP1P51693 650 aa17.46■□□□□ 0.39
LIG1-208ENST00000595758 FMR1Q06787 632 aaKnown RBP eCLIP17.46■□□□□ 0.39
LIG1-208ENST00000595758 TSHZ3Q63HK5 1081 aa17.46■□□□□ 0.39
LIG1-208ENST00000595758 NAA16Q6N069 864 aaPredicted RBP17.46■□□□□ 0.39
LIG1-208ENST00000595758 DLK2Q6UY11 383 aa17.46■□□□□ 0.39
LIG1-208ENST00000595758 PAG1Q9NWQ8 432 aa17.46■□□□□ 0.39
LIG1-208ENST00000595758 MROH7-TTC4A0A0A0MT08 1334 aa17.46■□□□□ 0.38
LIG1-208ENST00000595758 GAKO14976 1311 aa17.46■□□□□ 0.38
LIG1-208ENST00000595758 ERC2O15083 957 aa17.45■□□□□ 0.38
LIG1-208ENST00000595758 MAP3K12Q12852 859 aa17.45■□□□□ 0.38
LIG1-208ENST00000595758 USP40Q9NVE5 1235 aa17.45■□□□□ 0.38
LIG1-208ENST00000595758 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
LIG1-208ENST00000595758 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
LIG1-208ENST00000595758 GLRX3O76003 335 aaKnown RBP17.44■□□□□ 0.38
LIG1-208ENST00000595758 BTDP43251 543 aa17.44■□□□□ 0.38
LIG1-208ENST00000595758 CDC42EP5Q6NZY7 148 aa17.44■□□□□ 0.38
LIG1-208ENST00000595758 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
LIG1-208ENST00000595758 CDCA5Q96FF9 252 aa17.44■□□□□ 0.38
LIG1-208ENST00000595758 DEFB129Q9H1M3 183 aa17.44■□□□□ 0.38
LIG1-208ENST00000595758 STAP2Q9UGK3 403 aa17.44■□□□□ 0.38
LIG1-208ENST00000595758 SALL3Q9BXA9 1300 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms