RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 STK11IPQ8N1F8 1099 aa17.85■□□□□ 0.45
ZNF541-205ENST00000595558 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
ZNF541-205ENST00000595558 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
ZNF541-205ENST00000595558 IRS4O14654 1257 aaPredicted RBP17.85■□□□□ 0.45
ZNF541-205ENST00000595558 MCAMP43121 646 aa17.85■□□□□ 0.45
ZNF541-205ENST00000595558 UTP14CQ5TAP6 766 aaKnown RBP17.85■□□□□ 0.45
ZNF541-205ENST00000595558 ISM2Q6H9L7 571 aa17.85■□□□□ 0.45
ZNF541-205ENST00000595558 GIGYF2Q6Y7W6 1299 aaKnown RBP17.85■□□□□ 0.45
ZNF541-205ENST00000595558 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
ZNF541-205ENST00000595558 CNNM1Q9NRU3 951 aa17.85■□□□□ 0.45
ZNF541-205ENST00000595558 NEDD4P46934 1319 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 UBN2Q6ZU65 1347 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 PTPN14Q15678 1187 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 CEP57L1Q8IYX8 460 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 ZNF274Q96GC6 653 aaPredicted RBP17.84■□□□□ 0.45
ZNF541-205ENST00000595558 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 EXOC5O00471 708 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 TJP1Q07157 1748 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 TNS2Q63HR2 1409 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 LINC00301Q8NCQ3 95 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
ZNF541-205ENST00000595558 KIF28PB7ZC32 967 aa17.83■□□□□ 0.44
ZNF541-205ENST00000595558 FGAP02671 866 aa17.83■□□□□ 0.44
ZNF541-205ENST00000595558 PCCAP05165 728 aaPredicted RBP17.83■□□□□ 0.44
ZNF541-205ENST00000595558 CCDC158Q5M9N0 1113 aa17.83■□□□□ 0.44
ZNF541-205ENST00000595558 CCAR2Q8N163 923 aaKnown RBP17.83■□□□□ 0.44
ZNF541-205ENST00000595558 MYH15Q9Y2K3 1946 aa17.83■□□□□ 0.44
ZNF541-205ENST00000595558 SHANK3Q9BYB0 1731 aa17.83■□□□□ 0.44
ZNF541-205ENST00000595558 RXRAP19793 462 aa17.83■□□□□ 0.44
ZNF541-205ENST00000595558 RTEL1Q9NZ71 1219 aa17.83■□□□□ 0.44
ZNF541-205ENST00000595558 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.44
ZNF541-205ENST00000595558 NPHP1O15259 732 aa17.82■□□□□ 0.44
ZNF541-205ENST00000595558 PHKA1P46020 1223 aa17.82■□□□□ 0.44
ZNF541-205ENST00000595558 ADALQ6DHV7 355 aa17.82■□□□□ 0.44
ZNF541-205ENST00000595558 DZIP3Q86Y13 1208 aaKnown RBP17.82■□□□□ 0.44
ZNF541-205ENST00000595558 IQSEC3Q9UPP2 1182 aaPredicted RBP17.82■□□□□ 0.44
ZNF541-205ENST00000595558 HPS5Q9UPZ3 1129 aa17.82■□□□□ 0.44
ZNF541-205ENST00000595558 KCNQ2O43526 872 aa17.82■□□□□ 0.44
ZNF541-205ENST00000595558 IDH1O75874 414 aaKnown RBP17.82■□□□□ 0.44
ZNF541-205ENST00000595558 CSF1RP07333 972 aa17.82■□□□□ 0.44
ZNF541-205ENST00000595558 STK38Q15208 465 aa17.82■□□□□ 0.44
ZNF541-205ENST00000595558 XPO4Q9C0E2 1151 aaKnown RBP17.82■□□□□ 0.44
ZNF541-205ENST00000595558 SF3A1Q15459 793 aaKnown RBP17.81■□□□□ 0.44
ZNF541-205ENST00000595558 AIFM3Q96NN9 605 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 GPR108Q9NPR9 543 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 IFNKQ9P0W0 207 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 KIAA1468Q9P260 1216 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 SYCP1Q15431 976 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 KMT5BQ4FZB7 885 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 ARMCX5Q6P1M9 558 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 C8orf76Q96K31 380 aa17.81■□□□□ 0.44
ZNF541-205ENST00000595558 PIH1D3Q9NQM4 214 aaKnown RBP17.81■□□□□ 0.44
ZNF541-205ENST00000595558 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 CIAO1O76071 339 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 SMC2O95347 1197 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 ANTXR2P58335 489 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 PTPN21Q16825 1174 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 E4F1Q66K89 784 aaPredicted RBP17.8■□□□□ 0.44
ZNF541-205ENST00000595558 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
ZNF541-205ENST00000595558 GOLGA8BA8MQT2 603 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 PRC1O43663 620 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 CTSWP56202 376 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 ATL3Q6DD88 541 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 LRRN4CLQ8ND94 238 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 OGFRQ9NZT2 677 aa17.8■□□□□ 0.44
ZNF541-205ENST00000595558 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
ZNF541-205ENST00000595558 UBR2Q8IWV8 1755 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 NEMFO60524 1076 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 MARCKSP29966 332 aaPredicted RBP17.79■□□□□ 0.44
ZNF541-205ENST00000595558 ELF2Q15723 593 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 SLC9C2Q5TAH2 1124 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 TMC6Q7Z403 805 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 FEZ1Q99689 392 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 GTPBP4Q9BZE4 634 aaKnown RBP17.79■□□□□ 0.44
ZNF541-205ENST00000595558 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 SPTLC2O15270 562 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 MYSM1Q5VVJ2 828 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 FBXO18Q8NFZ0 1043 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 DDX41Q9UJV9 622 aaKnown RBP17.79■□□□□ 0.44
ZNF541-205ENST00000595558 WWC3Q9ULE0 1092 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 ABCC6O95255 1503 aa17.79■□□□□ 0.44
ZNF541-205ENST00000595558 UBE2Q2LH0YL09 131 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 GPAA1O43292 621 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 WDHD1O75717 1129 aaPredicted RBP17.78■□□□□ 0.44
ZNF541-205ENST00000595558 APPP05067 770 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 KIF18AQ8NI77 898 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 CGNQ9P2M7 1197 aaKnown RBP17.78■□□□□ 0.44
ZNF541-205ENST00000595558 MROH7-TTC4A0A0A0MT08 1334 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 NWD2Q9ULI1 1742 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 ZNF202O95125 648 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 ATP1A3P13637 1013 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 EVCP57679 992 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 CCDC24Q8N4L8 307 aa17.78■□□□□ 0.44
ZNF541-205ENST00000595558 NAT10Q9H0A0 1025 aaKnown RBP17.78■□□□□ 0.44
ZNF541-205ENST00000595558 A0A1W2PQ27 194 aa17.77■□□□□ 0.44
ZNF541-205ENST00000595558 A0A1W2PQ64 194 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms