RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 RAB11FIP3O75154 756 aa26.94■■□□□ 1.9
HOMER3-206ENST00000594439 UQCRFS1P1P0C7P4 283 aa26.94■■□□□ 1.9
HOMER3-206ENST00000594439 CCDC8Q9H0W5 538 aaPredicted RBP26.94■■□□□ 1.9
HOMER3-206ENST00000594439 TLR7Q9NYK1 1049 aaKnown RBP26.94■■□□□ 1.9
HOMER3-206ENST00000594439 HMG20BQ9P0W2 317 aa26.94■■□□□ 1.9
HOMER3-206ENST00000594439 AKAP11Q9UKA4 1901 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 PRDX5P30044 214 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 APOBEC3FQ8IUX4 373 aaKnown RBP26.93■■□□□ 1.9
HOMER3-206ENST00000594439 TEKT1Q969V4 418 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 KLRG1Q96E93 195 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 KIF1BPQ96EK5 621 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 CDCA5Q96FF9 252 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 ZNF408Q9H9D4 720 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 IL1RAPL2Q9NP60 686 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 PCDHB15Q9Y5E8 787 aa26.93■■□□□ 1.9
HOMER3-206ENST00000594439 APBB1O00213 710 aa26.92■■□□□ 1.9
HOMER3-206ENST00000594439 MCAMP43121 646 aa26.92■■□□□ 1.9
HOMER3-206ENST00000594439 PI16Q6UXB8 463 aa26.92■■□□□ 1.9
HOMER3-206ENST00000594439 SPATA5Q8NB90 893 aa26.92■■□□□ 1.9
HOMER3-206ENST00000594439 CLRN2A0PK11 232 aa26.91■■□□□ 1.9
HOMER3-206ENST00000594439 MYO1BO43795 1136 aa26.91■■□□□ 1.9
HOMER3-206ENST00000594439 LDHBP07195 334 aaKnown RBP26.91■■□□□ 1.9
HOMER3-206ENST00000594439 CCDC158Q5M9N0 1113 aa26.91■■□□□ 1.9
HOMER3-206ENST00000594439 TTC39AQ5SRH9 613 aa26.91■■□□□ 1.9
HOMER3-206ENST00000594439 AACSQ86V21 672 aa26.91■■□□□ 1.9
HOMER3-206ENST00000594439 ZGPATQ8N5A5 531 aaKnown RBP26.91■■□□□ 1.9
HOMER3-206ENST00000594439 SUPT16HQ9Y5B9 1047 aaKnown RBP26.91■■□□□ 1.9
HOMER3-206ENST00000594439 CNTNAP1P78357 1384 aa26.9■■□□□ 1.9
HOMER3-206ENST00000594439 SPDYE2Q495Y8 402 aa26.9■■□□□ 1.9
HOMER3-206ENST00000594439 HHIPL2Q6UWX4 724 aa26.9■■□□□ 1.9
HOMER3-206ENST00000594439 ZNF512BQ96KM6 892 aaPredicted RBP26.9■■□□□ 1.9
HOMER3-206ENST00000594439 ZDHHC15Q96MV8 337 aa26.9■■□□□ 1.9
HOMER3-206ENST00000594439 MKRN1Q9UHC7 482 aaKnown RBP26.9■■□□□ 1.9
HOMER3-206ENST00000594439 ABT1Q9ULW3 272 aaKnown RBP26.9■■□□□ 1.9
HOMER3-206ENST00000594439 RASSF10A6NK89 507 aa26.89■■□□□ 1.9
HOMER3-206ENST00000594439 TDRD3Q9H7E2 651 aaKnown RBP26.89■■□□□ 1.9
HOMER3-206ENST00000594439 ZNF70Q9UC06 446 aaPredicted RBP26.89■■□□□ 1.9
HOMER3-206ENST00000594439 TLL2Q9Y6L7 1015 aa26.89■■□□□ 1.9
HOMER3-206ENST00000594439 CEP350Q5VT06 3117 aa26.89■■□□□ 1.89
HOMER3-206ENST00000594439 DIXDC1Q155Q3 683 aa26.88■■□□□ 1.89
HOMER3-206ENST00000594439 PRAMEF18Q5VWM3 479 aa26.88■■□□□ 1.89
HOMER3-206ENST00000594439 CLASRPQ8N2M8 674 aaKnown RBP26.88■■□□□ 1.89
HOMER3-206ENST00000594439 DCTPP1Q9H773 170 aa26.88■■□□□ 1.89
HOMER3-206ENST00000594439 ABCF2Q9UG63 623 aa26.88■■□□□ 1.89
HOMER3-206ENST00000594439 MYH2Q9UKX2 1941 aa26.87■■□□□ 1.89
HOMER3-206ENST00000594439 APOBEC3HQ6NTF7 200 aaKnown RBP26.87■■□□□ 1.89
HOMER3-206ENST00000594439 SAPCD2Q86UD0 394 aa26.87■■□□□ 1.89
HOMER3-206ENST00000594439 VEZTQ9HBM0 779 aa26.87■■□□□ 1.89
HOMER3-206ENST00000594439 DEFB115Q30KQ5 88 aa26.86■■□□□ 1.89
HOMER3-206ENST00000594439 SPTY2D1Q68D10 685 aaPredicted RBP26.86■■□□□ 1.89
HOMER3-206ENST00000594439 TBC1D9Q6ZT07 1266 aa26.86■■□□□ 1.89
HOMER3-206ENST00000594439 DEFB129Q9H1M3 183 aa26.86■■□□□ 1.89
HOMER3-206ENST00000594439 GBA2Q9HCG7 927 aaPredicted RBP26.86■■□□□ 1.89
HOMER3-206ENST00000594439 SNRKQ9NRH2 765 aa26.86■■□□□ 1.89
HOMER3-206ENST00000594439 DAGLAQ9Y4D2 1042 aa26.86■■□□□ 1.89
HOMER3-206ENST00000594439 ERICH6Q7L0X2 663 aa26.84■■□□□ 1.89
HOMER3-206ENST00000594439 PPP2R3BQ9Y5P8 575 aa26.84■■□□□ 1.89
HOMER3-206ENST00000594439 DZIP1Q86YF9 867 aaKnown RBP26.83■■□□□ 1.89
HOMER3-206ENST00000594439 C2orf69Q8N8R5 385 aa26.83■■□□□ 1.89
HOMER3-206ENST00000594439 ZNF384Q8TF68 577 aa26.83■■□□□ 1.89
HOMER3-206ENST00000594439 LRRCC1Q9C099 1032 aa26.83■■□□□ 1.89
HOMER3-206ENST00000594439 PAPPA2Q9BXP8 1791 aa26.83■■□□□ 1.89
HOMER3-206ENST00000594439 MYO5AQ9Y4I1 1855 aaKnown RBP26.83■■□□□ 1.88
HOMER3-206ENST00000594439 IFIT2P09913 472 aaKnown RBP26.82■■□□□ 1.88
HOMER3-206ENST00000594439 ZAP70P43403 619 aa26.82■■□□□ 1.88
HOMER3-206ENST00000594439 AAMPQ13685 434 aa26.82■■□□□ 1.88
HOMER3-206ENST00000594439 JMYQ8N9B5 988 aa26.82■■□□□ 1.88
HOMER3-206ENST00000594439 GAKO14976 1311 aa26.82■■□□□ 1.88
HOMER3-206ENST00000594439 SMARCA5O60264 1052 aaPredicted RBP26.81■■□□□ 1.88
HOMER3-206ENST00000594439 CYP2E1P05181 493 aaPredicted RBP26.81■■□□□ 1.88
HOMER3-206ENST00000594439 VEGFBP49765 207 aa26.81■■□□□ 1.88
HOMER3-206ENST00000594439 MECOMQ03112 1051 aa26.81■■□□□ 1.88
HOMER3-206ENST00000594439 TNFAIP1Q13829 316 aa26.81■■□□□ 1.88
HOMER3-206ENST00000594439 RASA3Q14644 834 aa26.81■■□□□ 1.88
HOMER3-206ENST00000594439 EXOC6Q8TAG9 804 aa26.81■■□□□ 1.88
HOMER3-206ENST00000594439 FAM163AQ96GL9 167 aaPredicted RBP26.81■■□□□ 1.88
HOMER3-206ENST00000594439 HHIPL1Q96JK4 782 aa26.81■■□□□ 1.88
HOMER3-206ENST00000594439 TCP10L2B9ZVM9 353 aa26.8■■□□□ 1.88
HOMER3-206ENST00000594439 CACNB3P54284 484 aa26.8■■□□□ 1.88
HOMER3-206ENST00000594439 HUNKP57058 714 aa26.8■■□□□ 1.88
HOMER3-206ENST00000594439 FKBP1BP68106 108 aa26.8■■□□□ 1.88
HOMER3-206ENST00000594439 BCL11AQ9H165 835 aa26.8■■□□□ 1.88
HOMER3-206ENST00000594439 SSC5DA1L4H1 1573 aa26.8■■□□□ 1.88
HOMER3-206ENST00000594439 MAST2Q6P0Q8 1798 aa26.79■■□□□ 1.88
HOMER3-206ENST00000594439 NF2P35240 595 aa26.79■■□□□ 1.88
HOMER3-206ENST00000594439 FKBP1CQ5VVH2 108 aa26.79■■□□□ 1.88
HOMER3-206ENST00000594439 CDC42EP5Q6NZY7 148 aa26.79■■□□□ 1.88
HOMER3-206ENST00000594439 SLF2Q8IX21 1173 aa26.79■■□□□ 1.88
HOMER3-206ENST00000594439 NSUN4Q96CB9 384 aaKnown RBP26.79■■□□□ 1.88
HOMER3-206ENST00000594439 RAI14Q9P0K7 980 aa26.79■■□□□ 1.88
HOMER3-206ENST00000594439 LRP2BPQ9P2M1 347 aa26.79■■□□□ 1.88
HOMER3-206ENST00000594439 CYP4F22Q6NT55 531 aa26.78■■□□□ 1.88
HOMER3-206ENST00000594439 PIH1D3Q9NQM4 214 aaKnown RBP26.78■■□□□ 1.88
HOMER3-206ENST00000594439 TMOD2Q9NZR1 351 aa26.78■■□□□ 1.88
HOMER3-206ENST00000594439 MROH7-TTC4A0A0A0MT08 1334 aa26.78■■□□□ 1.88
HOMER3-206ENST00000594439 TNNI2P48788 182 aa26.77■■□□□ 1.88
HOMER3-206ENST00000594439 NBPF12Q5TAG4 269 aaPredicted RBP26.77■■□□□ 1.88
HOMER3-206ENST00000594439 MOB2Q70IA6 237 aa26.77■■□□□ 1.88
HOMER3-206ENST00000594439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.77■■□□□ 1.88
HOMER3-206ENST00000594439 CAPNS2Q96L46 248 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms