RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MAST3O60307 1309 aa23.96■■□□□ 1.43
LSM4-203ENST00000593829 WNT10BO00744 389 aa23.96■■□□□ 1.43
LSM4-203ENST00000593829 NBPF9Q3BBW0 867 aa23.96■■□□□ 1.43
LSM4-203ENST00000593829 CFAP100Q494V2 611 aa23.96■■□□□ 1.43
LSM4-203ENST00000593829 ITGBL1O95965 494 aaPredicted RBP23.96■■□□□ 1.43
LSM4-203ENST00000593829 RBM5P52756 815 aaKnown RBP eCLIP23.96■■□□□ 1.43
LSM4-203ENST00000593829 DCPSQ96C86 337 aaKnown RBP23.96■■□□□ 1.43
LSM4-203ENST00000593829 ZBED3Q96IU2 234 aaPredicted RBP23.96■■□□□ 1.43
LSM4-203ENST00000593829 RWDD1Q9H446 243 aaPredicted RBP23.96■■□□□ 1.43
LSM4-203ENST00000593829 SMARCA5O60264 1052 aaPredicted RBP23.95■■□□□ 1.42
LSM4-203ENST00000593829 LDHBP07195 334 aaKnown RBP23.95■■□□□ 1.42
LSM4-203ENST00000593829 HDLBPQ00341 1268 aaKnown RBP23.95■■□□□ 1.42
LSM4-203ENST00000593829 PI16Q6UXB8 463 aa23.95■■□□□ 1.42
LSM4-203ENST00000593829 GGA3Q9NZ52 723 aa23.95■■□□□ 1.42
LSM4-203ENST00000593829 ASTN2O75129 1339 aaPredicted RBP23.95■■□□□ 1.42
LSM4-203ENST00000593829 MRIQ9BWK5 157 aa23.94■■□□□ 1.42
LSM4-203ENST00000593829 PRDX5P30044 214 aa23.94■■□□□ 1.42
LSM4-203ENST00000593829 CRKP46108 304 aa23.94■■□□□ 1.42
LSM4-203ENST00000593829 ANGEL2Q5VTE6 544 aaKnown RBP23.94■■□□□ 1.42
LSM4-203ENST00000593829 SPTY2D1Q68D10 685 aaPredicted RBP23.94■■□□□ 1.42
LSM4-203ENST00000593829 CDC37L1Q7L3B6 337 aa23.94■■□□□ 1.42
LSM4-203ENST00000593829 GCC1Q96CN9 775 aa23.94■■□□□ 1.42
LSM4-203ENST00000593829 BACH2Q9BYV9 841 aa23.94■■□□□ 1.42
LSM4-203ENST00000593829 ABCF2Q9UG63 623 aa23.94■■□□□ 1.42
LSM4-203ENST00000593829 SPDYE2BA6NHP3 402 aa23.93■■□□□ 1.42
LSM4-203ENST00000593829 SPDYE6P0CI01 402 aa23.93■■□□□ 1.42
LSM4-203ENST00000593829 TEKT1Q969V4 418 aa23.93■■□□□ 1.42
LSM4-203ENST00000593829 SNRKQ9NRH2 765 aa23.93■■□□□ 1.42
LSM4-203ENST00000593829 PDE4AP27815 886 aa23.92■■□□□ 1.42
LSM4-203ENST00000593829 PRMT6Q96LA8 375 aaPredicted RBP23.92■■□□□ 1.42
LSM4-203ENST00000593829 PCDHAC2Q9Y5I4 1007 aa23.92■■□□□ 1.42
LSM4-203ENST00000593829 PASKQ96RG2 1323 aa23.92■■□□□ 1.42
LSM4-203ENST00000593829 PITPNM2Q9BZ72 1349 aa23.92■■□□□ 1.42
LSM4-203ENST00000593829 MYO1BO43795 1136 aa23.92■■□□□ 1.42
LSM4-203ENST00000593829 KRT26Q7Z3Y9 468 aa23.92■■□□□ 1.42
LSM4-203ENST00000593829 GLIS2Q9BZE0 524 aaPredicted RBP23.92■■□□□ 1.42
LSM4-203ENST00000593829 HSPA6P17066 643 aa23.91■■□□□ 1.42
LSM4-203ENST00000593829 USP48Q86UV5 1035 aa23.91■■□□□ 1.42
LSM4-203ENST00000593829 SULF1Q8IWU6 871 aa23.91■■□□□ 1.42
LSM4-203ENST00000593829 HHIPL2Q6UWX4 724 aa23.9■■□□□ 1.42
LSM4-203ENST00000593829 TBC1D9Q6ZT07 1266 aa23.9■■□□□ 1.42
LSM4-203ENST00000593829 ZAP70P43403 619 aa23.89■■□□□ 1.42
LSM4-203ENST00000593829 APLP1P51693 650 aa23.89■■□□□ 1.42
LSM4-203ENST00000593829 DZIP1Q86YF9 867 aaKnown RBP23.89■■□□□ 1.42
LSM4-203ENST00000593829 ZDHHC15Q96MV8 337 aa23.89■■□□□ 1.42
LSM4-203ENST00000593829 TRAF5O00463 557 aa23.88■■□□□ 1.41
LSM4-203ENST00000593829 IGHDP01880 384 aa23.88■■□□□ 1.41
LSM4-203ENST00000593829 CYP2E1P05181 493 aaPredicted RBP23.88■■□□□ 1.41
LSM4-203ENST00000593829 AKAP11Q9UKA4 1901 aa23.88■■□□□ 1.41
LSM4-203ENST00000593829 DIXDC1Q155Q3 683 aa23.88■■□□□ 1.41
LSM4-203ENST00000593829 ANKRD45Q5TZF3 282 aa23.88■■□□□ 1.41
LSM4-203ENST00000593829 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.88■■□□□ 1.41
LSM4-203ENST00000593829 LRP2BPQ9P2M1 347 aa23.88■■□□□ 1.41
LSM4-203ENST00000593829 ADM5C9JUS6 153 aa23.87■■□□□ 1.41
LSM4-203ENST00000593829 APOBEC3FQ8IUX4 373 aaKnown RBP23.87■■□□□ 1.41
LSM4-203ENST00000593829 SLF2Q8IX21 1173 aa23.87■■□□□ 1.41
LSM4-203ENST00000593829 RAI14Q9P0K7 980 aa23.87■■□□□ 1.41
LSM4-203ENST00000593829 CLRN2A0PK11 232 aa23.86■■□□□ 1.41
LSM4-203ENST00000593829 SMC5Q8IY18 1101 aa23.86■■□□□ 1.41
LSM4-203ENST00000593829 AOX1Q06278 1338 aa23.86■■□□□ 1.41
LSM4-203ENST00000593829 ATP5JP18859 108 aa23.86■■□□□ 1.41
LSM4-203ENST00000593829 MECOMQ03112 1051 aa23.86■■□□□ 1.41
LSM4-203ENST00000593829 FMR1Q06787 632 aaKnown RBP eCLIP23.86■■□□□ 1.41
LSM4-203ENST00000593829 APOBEC3HQ6NTF7 200 aaKnown RBP23.86■■□□□ 1.41
LSM4-203ENST00000593829 TDRD3Q9H7E2 651 aaKnown RBP23.86■■□□□ 1.41
LSM4-203ENST00000593829 DAGLAQ9Y4D2 1042 aa23.86■■□□□ 1.41
LSM4-203ENST00000593829 SPDYE2Q495Y8 402 aa23.85■■□□□ 1.41
LSM4-203ENST00000593829 GPATCH3Q96I76 525 aa23.85■■□□□ 1.41
LSM4-203ENST00000593829 ZNF70Q9UC06 446 aaPredicted RBP23.85■■□□□ 1.41
LSM4-203ENST00000593829 SCAF8Q9UPN6 1271 aaKnown RBP23.85■■□□□ 1.41
LSM4-203ENST00000593829 NDUFB9Q9Y6M9 179 aa23.85■■□□□ 1.41
LSM4-203ENST00000593829 POLR2AP24928 1970 aaKnown RBP23.85■■□□□ 1.41
LSM4-203ENST00000593829 VEZTQ9HBM0 779 aa23.84■■□□□ 1.41
LSM4-203ENST00000593829 ECHDC1Q9NTX5 307 aa23.84■■□□□ 1.41
LSM4-203ENST00000593829 IGSF3O75054 1194 aa23.84■■□□□ 1.41
LSM4-203ENST00000593829 GSTO1P78417 241 aa23.84■■□□□ 1.41
LSM4-203ENST00000593829 DLK2Q6UY11 383 aa23.84■■□□□ 1.41
LSM4-203ENST00000593829 NSUN4Q96CB9 384 aaKnown RBP23.84■■□□□ 1.41
LSM4-203ENST00000593829 FAM163AQ96GL9 167 aaPredicted RBP23.84■■□□□ 1.41
LSM4-203ENST00000593829 PIH1D3Q9NQM4 214 aaKnown RBP23.84■■□□□ 1.41
LSM4-203ENST00000593829 ECM29Q5VYK3 1845 aa23.84■■□□□ 1.41
LSM4-203ENST00000593829 TMEM88BA6NKF7 163 aa23.82■■□□□ 1.4
LSM4-203ENST00000593829 LDHCP07864 332 aa23.82■■□□□ 1.4
LSM4-203ENST00000593829 TTF1Q15361 905 aaPredicted RBP23.82■■□□□ 1.4
LSM4-203ENST00000593829 DNAJC2Q99543 621 aaKnown RBP23.82■■□□□ 1.4
LSM4-203ENST00000593829 BOLA2Q9H3K6 86 aa23.82■■□□□ 1.4
LSM4-203ENST00000593829 CELF2O95319 508 aaKnown RBP23.82■■□□□ 1.4
LSM4-203ENST00000593829 ZNF384Q8TF68 577 aa23.82■■□□□ 1.4
LSM4-203ENST00000593829 ANTXR1Q9H6X2 564 aa23.82■■□□□ 1.4
LSM4-203ENST00000593829 GAKO14976 1311 aa23.82■■□□□ 1.4
LSM4-203ENST00000593829 MROH7-TTC4A0A0A0MT08 1334 aa23.81■■□□□ 1.4
LSM4-203ENST00000593829 TNFAIP1Q13829 316 aa23.81■■□□□ 1.4
LSM4-203ENST00000593829 CST9Q5W186 159 aa23.81■■□□□ 1.4
LSM4-203ENST00000593829 CDCA5Q96FF9 252 aa23.81■■□□□ 1.4
LSM4-203ENST00000593829 DEFB129Q9H1M3 183 aa23.81■■□□□ 1.4
LSM4-203ENST00000593829 ZNF408Q9H9D4 720 aa23.81■■□□□ 1.4
LSM4-203ENST00000593829 CREBZFQ9NS37 354 aa23.81■■□□□ 1.4
LSM4-203ENST00000593829 TMOD2Q9NZR1 351 aa23.81■■□□□ 1.4
LSM4-203ENST00000593829 IDH1O75874 414 aaKnown RBP23.8■■□□□ 1.4
LSM4-203ENST00000593829 HAUS7Q99871 368 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms