RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 ARMC9Q7Z3E5 817 aa24.78■■□□□ 1.56
COPE-204ENST00000593827 SSH3Q8TE77 659 aa24.78■■□□□ 1.56
COPE-204ENST00000593827 PRMT6Q96LA8 375 aaPredicted RBP24.78■■□□□ 1.56
COPE-204ENST00000593827 VEZTQ9HBM0 779 aa24.78■■□□□ 1.56
COPE-204ENST00000593827 A0A1B0GUL7 405 aa24.77■■□□□ 1.56
COPE-204ENST00000593827 CTCFP49711 727 aaPredicted RBP24.77■■□□□ 1.56
COPE-204ENST00000593827 PANK1Q8TE04 598 aa24.77■■□□□ 1.56
COPE-204ENST00000593827 DDX19BQ9UMR2 479 aa24.77■■□□□ 1.56
COPE-204ENST00000593827 CLRN2A0PK11 232 aa24.76■■□□□ 1.55
COPE-204ENST00000593827 TNNI2P48788 182 aa24.76■■□□□ 1.55
COPE-204ENST00000593827 TIMM10P62072 90 aa24.76■■□□□ 1.55
COPE-204ENST00000593827 CCDC102BQ68D86 513 aa24.76■■□□□ 1.55
COPE-204ENST00000593827 NEUROD6Q96NK8 337 aa24.76■■□□□ 1.55
COPE-204ENST00000593827 TMOD2Q9NZR1 351 aa24.76■■□□□ 1.55
COPE-204ENST00000593827 CA12O43570 354 aa24.75■■□□□ 1.55
COPE-204ENST00000593827 SPDYE2Q495Y8 402 aa24.75■■□□□ 1.55
COPE-204ENST00000593827 SCAF8Q9UPN6 1271 aaKnown RBP24.75■■□□□ 1.55
COPE-204ENST00000593827 PDS5AQ29RF7 1337 aaKnown RBP24.75■■□□□ 1.55
COPE-204ENST00000593827 PPP1R12BO60237 982 aaPredicted RBP24.74■■□□□ 1.55
COPE-204ENST00000593827 SURF6O75683 361 aaKnown RBP24.74■■□□□ 1.55
COPE-204ENST00000593827 LDHBP07195 334 aaKnown RBP24.74■■□□□ 1.55
COPE-204ENST00000593827 PHKA1P46020 1223 aa24.74■■□□□ 1.55
COPE-204ENST00000593827 PRAMEF18Q5VWM3 479 aa24.74■■□□□ 1.55
COPE-204ENST00000593827 HHIPL2Q6UWX4 724 aa24.74■■□□□ 1.55
COPE-204ENST00000593827 REM2Q8IYK8 340 aaPredicted RBP24.74■■□□□ 1.55
COPE-204ENST00000593827 XAGE2Q96GT9 111 aa24.74■■□□□ 1.55
COPE-204ENST00000593827 ZDHHC15Q96MV8 337 aa24.74■■□□□ 1.55
COPE-204ENST00000593827 C1orf115Q9H7X2 142 aa24.74■■□□□ 1.55
COPE-204ENST00000593827 GPR108Q9NPR9 543 aa24.74■■□□□ 1.55
COPE-204ENST00000593827 ZNF70Q9UC06 446 aaPredicted RBP24.74■■□□□ 1.55
COPE-204ENST00000593827 SALL1Q9NSC2 1324 aa24.74■■□□□ 1.55
COPE-204ENST00000593827 AOC2O75106 756 aa24.73■■□□□ 1.55
COPE-204ENST00000593827 SPTY2D1Q68D10 685 aaPredicted RBP24.73■■□□□ 1.55
COPE-204ENST00000593827 TNS4Q8IZW8 715 aa24.73■■□□□ 1.55
COPE-204ENST00000593827 POLR2AP24928 1970 aaKnown RBP24.73■■□□□ 1.55
COPE-204ENST00000593827 PAPPA2Q9BXP8 1791 aa24.72■■□□□ 1.55
COPE-204ENST00000593827 ADORA1P30542 326 aa24.72■■□□□ 1.55
COPE-204ENST00000593827 PDE3AQ14432 1141 aa24.72■■□□□ 1.55
COPE-204ENST00000593827 HSP90AB4PQ58FF6 505 aa24.72■■□□□ 1.55
COPE-204ENST00000593827 SLF2Q8IX21 1173 aa24.72■■□□□ 1.55
COPE-204ENST00000593827 TDRD3Q9H7E2 651 aaKnown RBP24.72■■□□□ 1.55
COPE-204ENST00000593827 PCDHAC2Q9Y5I4 1007 aa24.72■■□□□ 1.55
COPE-204ENST00000593827 UNCXA6NJT0 531 aa24.71■■□□□ 1.55
COPE-204ENST00000593827 FOXN1O15353 648 aa24.71■■□□□ 1.55
COPE-204ENST00000593827 SLC10A3P09131 477 aa24.71■■□□□ 1.55
COPE-204ENST00000593827 RASA3Q14644 834 aa24.71■■□□□ 1.55
COPE-204ENST00000593827 ERC1Q8IUD2 1116 aa24.71■■□□□ 1.55
COPE-204ENST00000593827 NOP58Q9Y2X3 529 aaKnown RBP24.71■■□□□ 1.55
COPE-204ENST00000593827 HMMRO75330 724 aa24.7■■□□□ 1.54
COPE-204ENST00000593827 UQCRFS1P1P0C7P4 283 aa24.7■■□□□ 1.54
COPE-204ENST00000593827 CEP85Q6P2H3 762 aa24.7■■□□□ 1.54
COPE-204ENST00000593827 PRDM10Q9NQV6 1147 aa24.7■■□□□ 1.54
COPE-204ENST00000593827 ARAP2Q8WZ64 1704 aa24.69■■□□□ 1.54
COPE-204ENST00000593827 UBE2Q2LH0YL09 131 aa24.69■■□□□ 1.54
COPE-204ENST00000593827 GRIK5Q16478 980 aa24.69■■□□□ 1.54
COPE-204ENST00000593827 FKBP1CQ5VVH2 108 aa24.69■■□□□ 1.54
COPE-204ENST00000593827 RPAP2Q8IXW5 612 aaPredicted RBP24.69■■□□□ 1.54
COPE-204ENST00000593827 HOOK2Q96ED9 719 aa24.69■■□□□ 1.54
COPE-204ENST00000593827 COG6Q9Y2V7 657 aa24.69■■□□□ 1.54
COPE-204ENST00000593827 THSD7BQ9C0I4 1608 aa24.68■■□□□ 1.54
COPE-204ENST00000593827 FAM155AB1AL88 458 aaPredicted RBP24.68■■□□□ 1.54
COPE-204ENST00000593827 IREB2P48200 963 aaKnown RBP24.68■■□□□ 1.54
COPE-204ENST00000593827 RASGRF1Q13972 1273 aa24.68■■□□□ 1.54
COPE-204ENST00000593827 CCDC158Q5M9N0 1113 aa24.68■■□□□ 1.54
COPE-204ENST00000593827 TNNI3KQ59H18 835 aa24.67■■□□□ 1.54
COPE-204ENST00000593827 DZIP1Q86YF9 867 aaKnown RBP24.67■■□□□ 1.54
COPE-204ENST00000593827 ANGEL1Q9UNK9 670 aaKnown RBP24.67■■□□□ 1.54
COPE-204ENST00000593827 FPGT-TNNI3KV9GXZ4 949 aa24.67■■□□□ 1.54
COPE-204ENST00000593827 TCP10L2B9ZVM9 353 aa24.66■■□□□ 1.54
COPE-204ENST00000593827 CAPN15O75808 1086 aa24.66■■□□□ 1.54
COPE-204ENST00000593827 PRDX5P30044 214 aa24.66■■□□□ 1.54
COPE-204ENST00000593827 MAP3K11Q16584 847 aa24.66■■□□□ 1.54
COPE-204ENST00000593827 APOBEC3HQ6NTF7 200 aaKnown RBP24.66■■□□□ 1.54
COPE-204ENST00000593827 FAM83AQ86UY5 434 aa24.66■■□□□ 1.54
COPE-204ENST00000593827 RASAL3Q86YV0 1011 aa24.66■■□□□ 1.54
COPE-204ENST00000593827 ABCF2Q9UG63 623 aa24.66■■□□□ 1.54
COPE-204ENST00000593827 ARID4AP29374 1257 aaPredicted RBP24.65■■□□□ 1.54
COPE-204ENST00000593827 KIF23Q02241 960 aaPredicted RBP24.65■■□□□ 1.54
COPE-204ENST00000593827 PRKG1Q13976 671 aa24.65■■□□□ 1.54
COPE-204ENST00000593827 MOB2Q70IA6 237 aa24.65■■□□□ 1.54
COPE-204ENST00000593827 ZBTB40Q9NUA8 1239 aa24.65■■□□□ 1.54
COPE-204ENST00000593827 TTC39AQ5SRH9 613 aa24.64■■□□□ 1.54
COPE-204ENST00000593827 LDLRAD1Q5T700 205 aa24.64■■□□□ 1.54
COPE-204ENST00000593827 NBPF12Q5TAG4 269 aaPredicted RBP24.64■■□□□ 1.54
COPE-204ENST00000593827 ERICH6Q7L0X2 663 aa24.64■■□□□ 1.54
COPE-204ENST00000593827 SPATA5Q8NB90 893 aa24.64■■□□□ 1.54
COPE-204ENST00000593827 AOX1Q06278 1338 aa24.63■■□□□ 1.53
COPE-204ENST00000593827 GSTO1P78417 241 aa24.63■■□□□ 1.53
COPE-204ENST00000593827 SLC10A4Q96EP9 437 aa24.63■■□□□ 1.53
COPE-204ENST00000593827 DAGLAQ9Y4D2 1042 aa24.63■■□□□ 1.53
COPE-204ENST00000593827 IGSF3O75054 1194 aa24.62■■□□□ 1.53
COPE-204ENST00000593827 HSPA8P11142 646 aaKnown RBP24.62■■□□□ 1.53
COPE-204ENST00000593827 LBX1P52954 281 aa24.62■■□□□ 1.53
COPE-204ENST00000593827 SAGE1Q9NXZ1 904 aa24.62■■□□□ 1.53
COPE-204ENST00000593827 HMG20BQ9P0W2 317 aa24.62■■□□□ 1.53
COPE-204ENST00000593827 ECM29Q5VYK3 1845 aa24.62■■□□□ 1.53
COPE-204ENST00000593827 LDHCP07864 332 aa24.61■■□□□ 1.53
COPE-204ENST00000593827 DIXDC1Q155Q3 683 aa24.61■■□□□ 1.53
COPE-204ENST00000593827 ANKRD13AQ8IZ07 590 aa24.61■■□□□ 1.53
COPE-204ENST00000593827 TMEM39BQ9GZU3 492 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms