RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TRIM17Q9Y577 477 aa20.62■□□□□ 0.89
LIG1-205ENST00000593425 PDE4DIPQ5VU43 2346 aa20.61■□□□□ 0.89
LIG1-205ENST00000593425 TCP10L2B9ZVM9 353 aa20.61■□□□□ 0.89
LIG1-205ENST00000593425 CRHR2Q13324 411 aa20.61■□□□□ 0.89
LIG1-205ENST00000593425 OTOP1Q7RTM1 612 aa20.61■□□□□ 0.89
LIG1-205ENST00000593425 FBXO33Q7Z6M2 555 aa20.61■□□□□ 0.89
LIG1-205ENST00000593425 VGLL2Q8N8G2 317 aa20.61■□□□□ 0.89
LIG1-205ENST00000593425 PTPN18Q99952 460 aa20.61■□□□□ 0.89
LIG1-205ENST00000593425 CHAF1AQ13111 956 aaPredicted RBP20.6■□□□□ 0.89
LIG1-205ENST00000593425 METTL24Q5JXM2 366 aa20.6■□□□□ 0.89
LIG1-205ENST00000593425 KLHDC4Q8TBB5 520 aa20.6■□□□□ 0.89
LIG1-205ENST00000593425 OPTNQ96CV9 577 aa20.6■□□□□ 0.89
LIG1-205ENST00000593425 TMEM39BQ9GZU3 492 aa20.6■□□□□ 0.89
LIG1-205ENST00000593425 MYH13Q9UKX3 1938 aa20.59■□□□□ 0.89
LIG1-205ENST00000593425 TESPA1A2RU30 521 aaPredicted RBP20.59■□□□□ 0.89
LIG1-205ENST00000593425 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.59■□□□□ 0.89
LIG1-205ENST00000593425 VPS37DQ86XT2 251 aa20.59■□□□□ 0.89
LIG1-205ENST00000593425 CNKSR2Q8WXI2 1034 aa20.59■□□□□ 0.89
LIG1-205ENST00000593425 PDE8BO95263 885 aa20.58■□□□□ 0.89
LIG1-205ENST00000593425 PRPF38BQ5VTL8 546 aaKnown RBP20.58■□□□□ 0.89
LIG1-205ENST00000593425 CD99L2Q8TCZ2 262 aa20.58■□□□□ 0.89
LIG1-205ENST00000593425 RBBP6Q7Z6E9 1792 aaKnown RBP20.58■□□□□ 0.89
LIG1-205ENST00000593425 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
LIG1-205ENST00000593425 CACNB3P54284 484 aa20.57■□□□□ 0.88
LIG1-205ENST00000593425 CAP1Q01518 475 aa20.57■□□□□ 0.88
LIG1-205ENST00000593425 OTUD7BQ6GQQ9 843 aa20.57■□□□□ 0.88
LIG1-205ENST00000593425 MS4A4AQ96JQ5 239 aa20.57■□□□□ 0.88
LIG1-205ENST00000593425 PTPRCP08575 1304 aa20.56■□□□□ 0.88
LIG1-205ENST00000593425 TNNI2P48788 182 aa20.56■□□□□ 0.88
LIG1-205ENST00000593425 BCAMP50895 628 aa20.56■□□□□ 0.88
LIG1-205ENST00000593425 VGLL4Q14135 290 aa20.56■□□□□ 0.88
LIG1-205ENST00000593425 CAVIN4Q5BKX8 364 aa20.56■□□□□ 0.88
LIG1-205ENST00000593425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.56■□□□□ 0.88
LIG1-205ENST00000593425 SSH1Q8WYL5 1049 aa20.56■□□□□ 0.88
LIG1-205ENST00000593425 ERO1AQ96HE7 468 aa20.56■□□□□ 0.88
LIG1-205ENST00000593425 FRAT2O75474 233 aaPredicted RBP20.55■□□□□ 0.88
LIG1-205ENST00000593425 HDLBPQ00341 1268 aaKnown RBP20.55■□□□□ 0.88
LIG1-205ENST00000593425 TBC1D22AQ8WUA7 517 aa20.55■□□□□ 0.88
LIG1-205ENST00000593425 BRI3BPQ8WY22 251 aa20.55■□□□□ 0.88
LIG1-205ENST00000593425 TEKT1Q969V4 418 aa20.55■□□□□ 0.88
LIG1-205ENST00000593425 USP44Q9H0E7 712 aa20.55■□□□□ 0.88
LIG1-205ENST00000593425 FGFR2P21802 821 aa20.54■□□□□ 0.88
LIG1-205ENST00000593425 MAP3K9P80192 1104 aa20.54■□□□□ 0.88
LIG1-205ENST00000593425 PTPN22Q9Y2R2 807 aa20.54■□□□□ 0.88
LIG1-205ENST00000593425 HTTP42858 3142 aa20.54■□□□□ 0.88
LIG1-205ENST00000593425 CCL15-CCL14A0A0B4J2E2 113 aa20.53■□□□□ 0.88
LIG1-205ENST00000593425 POTEFA5A3E0 1075 aa20.53■□□□□ 0.88
LIG1-205ENST00000593425 RFX5P48382 616 aaPredicted RBP20.53■□□□□ 0.88
LIG1-205ENST00000593425 SP3Q02447 781 aa20.53■□□□□ 0.88
LIG1-205ENST00000593425 CCL15Q16663 113 aa20.53■□□□□ 0.88
LIG1-205ENST00000593425 ZSWIM8A7E2V4 1837 aa20.53■□□□□ 0.88
LIG1-205ENST00000593425 E9PSI1 815 aa20.52■□□□□ 0.88
LIG1-205ENST00000593425 PUM3Q15397 648 aaKnown RBP20.52■□□□□ 0.88
LIG1-205ENST00000593425 APOBEC3HQ6NTF7 200 aaKnown RBP20.52■□□□□ 0.88
LIG1-205ENST00000593425 OTUD5Q96G74 571 aa20.52■□□□□ 0.88
LIG1-205ENST00000593425 ZDHHC15Q96MV8 337 aa20.52■□□□□ 0.88
LIG1-205ENST00000593425 EFCC1Q9HA90 598 aa20.52■□□□□ 0.88
LIG1-205ENST00000593425 CSADQ9Y600 493 aa20.52■□□□□ 0.88
LIG1-205ENST00000593425 KIF16BQ96L93 1317 aa20.52■□□□□ 0.87
LIG1-205ENST00000593425 GTF2A2P52657 109 aa20.51■□□□□ 0.87
LIG1-205ENST00000593425 TAF1CQ15572 869 aaPredicted RBP20.51■□□□□ 0.87
LIG1-205ENST00000593425 FAM43AQ8N2R8 423 aa20.51■□□□□ 0.87
LIG1-205ENST00000593425 SNCAIPQ9Y6H5 919 aa20.51■□□□□ 0.87
LIG1-205ENST00000593425 SPDYE5A6NIY4 337 aa20.5■□□□□ 0.87
LIG1-205ENST00000593425 EYA2O00167 538 aa20.5■□□□□ 0.87
LIG1-205ENST00000593425 IFIT1P09914 478 aaKnown RBP20.5■□□□□ 0.87
LIG1-205ENST00000593425 INTS3Q68E01 1043 aaKnown RBP20.5■□□□□ 0.87
LIG1-205ENST00000593425 MRIQ9BWK5 157 aa20.5■□□□□ 0.87
LIG1-205ENST00000593425 MAST3O60307 1309 aa20.5■□□□□ 0.87
LIG1-205ENST00000593425 RPAP1Q9BWH6 1393 aaPredicted RBP20.49■□□□□ 0.87
LIG1-205ENST00000593425 SLFN5Q08AF3 891 aa20.49■□□□□ 0.87
LIG1-205ENST00000593425 FAM83AQ86UY5 434 aa20.49■□□□□ 0.87
LIG1-205ENST00000593425 ARMC5Q96C12 935 aa20.49■□□□□ 0.87
LIG1-205ENST00000593425 WRNIP1Q96S55 665 aa20.49■□□□□ 0.87
LIG1-205ENST00000593425 TMOD2Q9NZR1 351 aa20.49■□□□□ 0.87
LIG1-205ENST00000593425 SUGT1Q9Y2Z0 365 aa20.49■□□□□ 0.87
LIG1-205ENST00000593425 HHIPL2Q6UWX4 724 aa20.48■□□□□ 0.87
LIG1-205ENST00000593425 ATG9AQ7Z3C6 839 aa20.48■□□□□ 0.87
LIG1-205ENST00000593425 ZKSCAN4Q969J2 545 aaPredicted RBP20.48■□□□□ 0.87
LIG1-205ENST00000593425 ZFYVE28Q9HCC9 887 aa20.48■□□□□ 0.87
LIG1-205ENST00000593425 SLC5A1P13866 664 aa20.47■□□□□ 0.87
LIG1-205ENST00000593425 FKBP1CQ5VVH2 108 aa20.47■□□□□ 0.87
LIG1-205ENST00000593425 LPIN2Q92539 896 aa20.47■□□□□ 0.87
LIG1-205ENST00000593425 CDCA7LQ96GN5 454 aa20.47■□□□□ 0.87
LIG1-205ENST00000593425 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
LIG1-205ENST00000593425 ERO1BQ86YB8 467 aa20.46■□□□□ 0.87
LIG1-205ENST00000593425 SMC4Q9NTJ3 1288 aa20.46■□□□□ 0.87
LIG1-205ENST00000593425 IRF6O14896 467 aa20.45■□□□□ 0.86
LIG1-205ENST00000593425 DIXDC1Q155Q3 683 aa20.45■□□□□ 0.86
LIG1-205ENST00000593425 WDR66Q8TBY9 1149 aa20.45■□□□□ 0.86
LIG1-205ENST00000593425 SIL1Q9H173 461 aa20.45■□□□□ 0.86
LIG1-205ENST00000593425 DAGLAQ9Y4D2 1042 aa20.45■□□□□ 0.86
LIG1-205ENST00000593425 PTCH2Q9Y6C5 1203 aa20.45■□□□□ 0.86
LIG1-205ENST00000593425 CENPFP49454 3210 aa20.44■□□□□ 0.86
LIG1-205ENST00000593425 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
LIG1-205ENST00000593425 CETPP11597 493 aa20.44■□□□□ 0.86
LIG1-205ENST00000593425 EN2P19622 333 aaPredicted RBP20.44■□□□□ 0.86
LIG1-205ENST00000593425 PRDX5P30044 214 aa20.44■□□□□ 0.86
LIG1-205ENST00000593425 PPIL2Q13356 520 aa20.44■□□□□ 0.86
LIG1-205ENST00000593425 DCAF15Q66K64 600 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms