RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 BCAMP50895 628 aa25.66■■□□□ 1.7
TRIM47-207ENST00000593089 NOM1Q5C9Z4 860 aaKnown RBP25.66■■□□□ 1.7
TRIM47-207ENST00000593089 CFHR5Q9BXR6 569 aa25.66■■□□□ 1.7
TRIM47-207ENST00000593089 HPS5Q9UPZ3 1129 aa25.66■■□□□ 1.7
TRIM47-207ENST00000593089 LAMB1P07942 1786 aa25.66■■□□□ 1.7
TRIM47-207ENST00000593089 UNCXA6NJT0 531 aa25.65■■□□□ 1.7
TRIM47-207ENST00000593089 FKTNO75072 461 aa25.65■■□□□ 1.7
TRIM47-207ENST00000593089 ALDH1A1P00352 501 aa25.65■■□□□ 1.7
TRIM47-207ENST00000593089 INHBEP58166 350 aa25.65■■□□□ 1.7
TRIM47-207ENST00000593089 PKN2Q16513 984 aaKnown RBP25.65■■□□□ 1.7
TRIM47-207ENST00000593089 IFNL1Q8IU54 200 aa25.65■■□□□ 1.7
TRIM47-207ENST00000593089 CDAN1Q8IWY9 1227 aa25.65■■□□□ 1.7
TRIM47-207ENST00000593089 ANKRD13AQ8IZ07 590 aa25.65■■□□□ 1.7
TRIM47-207ENST00000593089 TBC1D22AQ8WUA7 517 aa25.65■■□□□ 1.7
TRIM47-207ENST00000593089 PUM3Q15397 648 aaKnown RBP25.64■■□□□ 1.7
TRIM47-207ENST00000593089 IGF2BP3O00425 579 aaKnown RBP eCLIP25.63■■□□□ 1.69
TRIM47-207ENST00000593089 IFIT1P09914 478 aaKnown RBP25.63■■□□□ 1.69
TRIM47-207ENST00000593089 RFX5P48382 616 aaPredicted RBP25.63■■□□□ 1.69
TRIM47-207ENST00000593089 TNNI2P48788 182 aa25.63■■□□□ 1.69
TRIM47-207ENST00000593089 TEPSINQ96N21 525 aa25.63■■□□□ 1.69
TRIM47-207ENST00000593089 TMEM39BQ9GZU3 492 aa25.63■■□□□ 1.69
TRIM47-207ENST00000593089 EYA2O00167 538 aa25.62■■□□□ 1.69
TRIM47-207ENST00000593089 FGFR2P21802 821 aa25.62■■□□□ 1.69
TRIM47-207ENST00000593089 GJA5P36382 358 aa25.62■■□□□ 1.69
TRIM47-207ENST00000593089 TRMT2AQ8IZ69 625 aaKnown RBP25.62■■□□□ 1.69
TRIM47-207ENST00000593089 TEKT1Q969V4 418 aa25.62■■□□□ 1.69
TRIM47-207ENST00000593089 ELP3Q9H9T3 547 aa25.62■■□□□ 1.69
TRIM47-207ENST00000593089 MYH13Q9UKX3 1938 aa25.62■■□□□ 1.69
TRIM47-207ENST00000593089 HDLBPQ00341 1268 aaKnown RBP25.61■■□□□ 1.69
TRIM47-207ENST00000593089 UBTFL1P0CB47 393 aaPredicted RBP25.6■■□□□ 1.69
TRIM47-207ENST00000593089 CACNB3P54284 484 aa25.6■■□□□ 1.69
TRIM47-207ENST00000593089 NOB1Q9ULX3 412 aaKnown RBP25.6■■□□□ 1.69
TRIM47-207ENST00000593089 KIF16BQ96L93 1317 aa25.6■■□□□ 1.69
TRIM47-207ENST00000593089 SLC5A1P13866 664 aa25.59■■□□□ 1.69
TRIM47-207ENST00000593089 OPTNQ96CV9 577 aa25.59■■□□□ 1.69
TRIM47-207ENST00000593089 FBXO46Q6PJ61 603 aaPredicted RBP25.58■■□□□ 1.69
TRIM47-207ENST00000593089 ATG9AQ7Z3C6 839 aa25.58■■□□□ 1.69
TRIM47-207ENST00000593089 LPIN2Q92539 896 aa25.58■■□□□ 1.69
TRIM47-207ENST00000593089 SIL1Q9H173 461 aa25.58■■□□□ 1.69
TRIM47-207ENST00000593089 OTUD7BQ6GQQ9 843 aa25.57■■□□□ 1.68
TRIM47-207ENST00000593089 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.57■■□□□ 1.68
TRIM47-207ENST00000593089 TMOD2Q9NZR1 351 aa25.57■■□□□ 1.68
TRIM47-207ENST00000593089 MAST3O60307 1309 aa25.57■■□□□ 1.68
TRIM47-207ENST00000593089 CT47B1P0C2W7 299 aaPredicted RBP25.56■■□□□ 1.68
TRIM47-207ENST00000593089 CNKSR2Q8WXI2 1034 aa25.56■■□□□ 1.68
TRIM47-207ENST00000593089 ZDHHC15Q96MV8 337 aa25.56■■□□□ 1.68
TRIM47-207ENST00000593089 MAP3K9P80192 1104 aa25.55■■□□□ 1.68
TRIM47-207ENST00000593089 CRHR2Q13324 411 aa25.55■■□□□ 1.68
TRIM47-207ENST00000593089 VGLL4Q14135 290 aa25.55■■□□□ 1.68
TRIM47-207ENST00000593089 PTPN18Q99952 460 aa25.55■■□□□ 1.68
TRIM47-207ENST00000593089 MRIQ9BWK5 157 aa25.55■■□□□ 1.68
TRIM47-207ENST00000593089 API5Q9BZZ5 524 aaKnown RBP25.55■■□□□ 1.68
TRIM47-207ENST00000593089 SUGT1Q9Y2Z0 365 aa25.55■■□□□ 1.68
TRIM47-207ENST00000593089 TESPA1A2RU30 521 aaPredicted RBP25.54■■□□□ 1.68
TRIM47-207ENST00000593089 APOBEC3HQ6NTF7 200 aaKnown RBP25.54■■□□□ 1.68
TRIM47-207ENST00000593089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.54■■□□□ 1.68
TRIM47-207ENST00000593089 TRIM17Q9Y577 477 aa25.54■■□□□ 1.68
TRIM47-207ENST00000593089 CSADQ9Y600 493 aa25.54■■□□□ 1.68
TRIM47-207ENST00000593089 LRRFIP2Q9Y608 721 aaKnown RBP25.54■■□□□ 1.68
TRIM47-207ENST00000593089 ATP2B3Q16720 1220 aa25.53■■□□□ 1.68
TRIM47-207ENST00000593089 HHIPL2Q6UWX4 724 aa25.53■■□□□ 1.68
TRIM47-207ENST00000593089 WDR66Q8TBY9 1149 aa25.53■■□□□ 1.68
TRIM47-207ENST00000593089 CEP126Q9P2H0 1117 aa25.53■■□□□ 1.68
TRIM47-207ENST00000593089 CIAO1O76071 339 aa25.52■■□□□ 1.68
TRIM47-207ENST00000593089 OTUD5Q96G74 571 aa25.52■■□□□ 1.68
TRIM47-207ENST00000593089 MS4A4AQ96JQ5 239 aa25.52■■□□□ 1.68
TRIM47-207ENST00000593089 FBXO3Q9UK99 471 aa25.52■■□□□ 1.68
TRIM47-207ENST00000593089 OTOP1Q7RTM1 612 aa25.51■■□□□ 1.67
TRIM47-207ENST00000593089 FAM83AQ86UY5 434 aa25.51■■□□□ 1.67
TRIM47-207ENST00000593089 PA2G4Q9UQ80 394 aaKnown RBP25.51■■□□□ 1.67
TRIM47-207ENST00000593089 TNRC18O15417 2968 aaPredicted RBP25.51■■□□□ 1.67
TRIM47-207ENST00000593089 CCL15-CCL14A0A0B4J2E2 113 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 CCER2I3L3R5 266 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 CCL15Q16663 113 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 FKBP1CQ5VVH2 108 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 CD99L2Q8TCZ2 262 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 BRI3BPQ8WY22 251 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 ERO1AQ96HE7 468 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 MEIS3Q99687 375 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 HDAC5Q9UQL6 1122 aa25.5■■□□□ 1.67
TRIM47-207ENST00000593089 GTF2A2P52657 109 aa25.49■■□□□ 1.67
TRIM47-207ENST00000593089 RARSP54136 660 aaKnown RBP25.49■■□□□ 1.67
TRIM47-207ENST00000593089 WRNIP1Q96S55 665 aa25.49■■□□□ 1.67
TRIM47-207ENST00000593089 PRDX5P30044 214 aa25.48■■□□□ 1.67
TRIM47-207ENST00000593089 IL15P40933 162 aaPredicted RBP25.48■■□□□ 1.67
TRIM47-207ENST00000593089 DIXDC1Q155Q3 683 aa25.48■■□□□ 1.67
TRIM47-207ENST00000593089 HOOK2Q96ED9 719 aa25.48■■□□□ 1.67
TRIM47-207ENST00000593089 GNL3LQ9NVN8 582 aaKnown RBP25.48■■□□□ 1.67
TRIM47-207ENST00000593089 SNCAIPQ9Y6H5 919 aa25.48■■□□□ 1.67
TRIM47-207ENST00000593089 SPDYE5A6NIY4 337 aa25.47■■□□□ 1.67
TRIM47-207ENST00000593089 SP3Q02447 781 aa25.47■■□□□ 1.67
TRIM47-207ENST00000593089 ZKSCAN4Q969J2 545 aaPredicted RBP25.47■■□□□ 1.67
TRIM47-207ENST00000593089 DAGLAQ9Y4D2 1042 aa25.47■■□□□ 1.67
TRIM47-207ENST00000593089 RPAP1Q9BWH6 1393 aaPredicted RBP25.46■■□□□ 1.67
TRIM47-207ENST00000593089 PHKA1P46020 1223 aa25.46■■□□□ 1.67
TRIM47-207ENST00000593089 TAF1CQ15572 869 aaPredicted RBP25.46■■□□□ 1.67
TRIM47-207ENST00000593089 DCAF15Q66K64 600 aa25.46■■□□□ 1.67
TRIM47-207ENST00000593089 MIGA2Q7L4E1 593 aa25.46■■□□□ 1.67
TRIM47-207ENST00000593089 AK9Q5TCS8 1911 aa25.45■■□□□ 1.67
TRIM47-207ENST00000593089 LDHBP07195 334 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms