RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 DZIP1LQ8IYY4 767 aaKnown RBP23.16■■□□□ 1.3
CIRBP-238ENST00000592412 OPTNQ96CV9 577 aa23.16■■□□□ 1.3
CIRBP-238ENST00000592412 ERO1AQ96HE7 468 aa23.16■■□□□ 1.3
CIRBP-238ENST00000592412 C9orf78Q9NZ63 289 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-238ENST00000592412 RIPOR2Q9Y4F9 1068 aa23.16■■□□□ 1.3
CIRBP-238ENST00000592412 KIAA0100Q14667 2235 aaKnown RBP23.15■■□□□ 1.3
CIRBP-238ENST00000592412 TNFAIP1Q13829 316 aa23.15■■□□□ 1.3
CIRBP-238ENST00000592412 TMEM39BQ9GZU3 492 aa23.15■■□□□ 1.3
CIRBP-238ENST00000592412 NBPF7P0C2Y1 421 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-238ENST00000592412 CRKP46108 304 aa23.14■■□□□ 1.29
CIRBP-238ENST00000592412 INTS3Q68E01 1043 aaKnown RBP23.14■■□□□ 1.29
CIRBP-238ENST00000592412 BRI3BPQ8WY22 251 aa23.14■■□□□ 1.29
CIRBP-238ENST00000592412 ARMC5Q96C12 935 aa23.14■■□□□ 1.29
CIRBP-238ENST00000592412 TCP10L2B9ZVM9 353 aa23.13■■□□□ 1.29
CIRBP-238ENST00000592412 SP3Q02447 781 aa23.13■■□□□ 1.29
CIRBP-238ENST00000592412 OTUD7BQ6GQQ9 843 aa23.13■■□□□ 1.29
CIRBP-238ENST00000592412 SLC4A10Q6U841 1118 aa23.13■■□□□ 1.29
CIRBP-238ENST00000592412 SRCIN1Q9C0H9 1055 aa23.13■■□□□ 1.29
CIRBP-238ENST00000592412 EFCC1Q9HA90 598 aa23.13■■□□□ 1.29
CIRBP-238ENST00000592412 UTYO14607 1347 aa23.12■■□□□ 1.29
CIRBP-238ENST00000592412 VGLL4Q14135 290 aa23.12■■□□□ 1.29
CIRBP-238ENST00000592412 FBXO33Q7Z6M2 555 aa23.12■■□□□ 1.29
CIRBP-238ENST00000592412 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.12■■□□□ 1.297e-15■□□□□ 9.7
CIRBP-238ENST00000592412 IQSEC3Q9UPP2 1182 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-238ENST00000592412 RABL6Q3YEC7 729 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-238ENST00000592412 LRRC24Q50LG9 513 aa23.1■■□□□ 1.29
CIRBP-238ENST00000592412 ANKRD44Q8N8A2 993 aa23.1■■□□□ 1.29
CIRBP-238ENST00000592412 VGLL2Q8N8G2 317 aa23.1■■□□□ 1.29
CIRBP-238ENST00000592412 BICC1Q9H694 974 aaKnown RBP23.1■■□□□ 1.29
CIRBP-238ENST00000592412 MROH5Q6ZUA9 1318 aa23.09■■□□□ 1.29
CIRBP-238ENST00000592412 CACNB3P54284 484 aa23.09■■□□□ 1.29
CIRBP-238ENST00000592412 MAP3K9P80192 1104 aa23.09■■□□□ 1.29
CIRBP-238ENST00000592412 FAM43AQ8N2R8 423 aa23.09■■□□□ 1.29
CIRBP-238ENST00000592412 CCL15-CCL14A0A0B4J2E2 113 aa23.08■■□□□ 1.29
CIRBP-238ENST00000592412 EN2P19622 333 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-238ENST00000592412 CCL15Q16663 113 aa23.08■■□□□ 1.29
CIRBP-238ENST00000592412 CHAF1AQ13111 956 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-238ENST00000592412 OTUD5Q96G74 571 aa23.07■■□□□ 1.28
CIRBP-238ENST00000592412 ZNF333Q96JL9 665 aa23.07■■□□□ 1.28
CIRBP-238ENST00000592412 SNCAIPQ9Y6H5 919 aa23.07■■□□□ 1.28
CIRBP-238ENST00000592412 ZSWIM8A7E2V4 1837 aa23.07■■□□□ 1.28
CIRBP-238ENST00000592412 TNNI2P48788 182 aa23.06■■□□□ 1.28
CIRBP-238ENST00000592412 GTF2A2P52657 109 aa23.06■■□□□ 1.28
CIRBP-238ENST00000592412 HDLBPQ00341 1268 aaKnown RBP23.06■■□□□ 1.28
CIRBP-238ENST00000592412 TAF1CQ15572 869 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-238ENST00000592412 SPDYE5A6NIY4 337 aa23.05■■□□□ 1.28
CIRBP-238ENST00000592412 KLHDC4Q8TBB5 520 aa23.05■■□□□ 1.28
CIRBP-238ENST00000592412 PTCH2Q9Y6C5 1203 aa23.05■■□□□ 1.28
CIRBP-238ENST00000592412 ZNF521Q96K83 1311 aa23.05■■□□□ 1.28
CIRBP-238ENST00000592412 PDE8BO95263 885 aa23.04■■□□□ 1.28
CIRBP-238ENST00000592412 BCAMP50895 628 aa23.04■■□□□ 1.28
CIRBP-238ENST00000592412 HABP4Q5JVS0 413 aaKnown RBP23.04■■□□□ 1.28
CIRBP-238ENST00000592412 METTL24Q5JXM2 366 aa23.04■■□□□ 1.28
CIRBP-238ENST00000592412 APOBEC3HQ6NTF7 200 aaKnown RBP23.04■■□□□ 1.28
CIRBP-238ENST00000592412 VPS37DQ86XT2 251 aa23.04■■□□□ 1.28
CIRBP-238ENST00000592412 GCC1Q96CN9 775 aa23.04■■□□□ 1.28
CIRBP-238ENST00000592412 ZFYVE28Q9HCC9 887 aa23.04■■□□□ 1.28
CIRBP-238ENST00000592412 CSADQ9Y600 493 aa23.04■■□□□ 1.28
CIRBP-238ENST00000592412 MRPL50Q8N5N7 158 aaKnown RBP23.03■■□□□ 1.28
CIRBP-238ENST00000592412 TBC1D22AQ8WUA7 517 aa23.03■■□□□ 1.28
CIRBP-238ENST00000592412 TEKT1Q969V4 418 aa23.03■■□□□ 1.28
CIRBP-238ENST00000592412 ZDHHC15Q96MV8 337 aa23.03■■□□□ 1.28
CIRBP-238ENST00000592412 FGFR2P21802 821 aa23.02■■□□□ 1.28
CIRBP-238ENST00000592412 ZKSCAN4Q969J2 545 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-238ENST00000592412 MRIQ9BWK5 157 aa23.02■■□□□ 1.28
CIRBP-238ENST00000592412 ARHGAP39Q9C0H5 1083 aa23.02■■□□□ 1.28
CIRBP-238ENST00000592412 ANP32CO43423 234 aa23.01■■□□□ 1.27
CIRBP-238ENST00000592412 CAVIN4Q5BKX8 364 aa23.01■■□□□ 1.27
CIRBP-238ENST00000592412 FAM83AQ86UY5 434 aa23.01■■□□□ 1.27
CIRBP-238ENST00000592412 WRNIP1Q96S55 665 aa23.01■■□□□ 1.27
CIRBP-238ENST00000592412 CEP290O15078 2479 aa23.01■■□□□ 1.27
CIRBP-238ENST00000592412 SZT2Q5T011 3432 aa23■■□□□ 1.27
CIRBP-238ENST00000592412 RANBP2P49792 3224 aaKnown RBP23■■□□□ 1.27
CIRBP-238ENST00000592412 BTBD19C9JJ37 291 aa23■■□□□ 1.27
CIRBP-238ENST00000592412 IRF6O14896 467 aa23■■□□□ 1.27
CIRBP-238ENST00000592412 FKBP1CQ5VVH2 108 aa23■■□□□ 1.27
CIRBP-238ENST00000592412 ERO1BQ86YB8 467 aa23■■□□□ 1.27
CIRBP-238ENST00000592412 RPAP1Q9BWH6 1393 aaPredicted RBP23■■□□□ 1.27
CIRBP-238ENST00000592412 TLR2O60603 784 aa22.99■■□□□ 1.27
CIRBP-238ENST00000592412 FRAT2O75474 233 aaPredicted RBP22.99■■□□□ 1.27
CIRBP-238ENST00000592412 SLC9C1Q4G0N8 1177 aa22.99■■□□□ 1.27
CIRBP-238ENST00000592412 FAM9BQ8IZU0 186 aa22.99■■□□□ 1.27
CIRBP-238ENST00000592412 USP44Q9H0E7 712 aa22.99■■□□□ 1.27
CIRBP-238ENST00000592412 KIF16BQ96L93 1317 aa22.99■■□□□ 1.27
CIRBP-238ENST00000592412 CETPP11597 493 aa22.98■■□□□ 1.27
CIRBP-238ENST00000592412 RFX5P48382 616 aaPredicted RBP22.98■■□□□ 1.27
CIRBP-238ENST00000592412 SUGT1Q9Y2Z0 365 aa22.98■■□□□ 1.27
CIRBP-238ENST00000592412 LACTBP83111 547 aaPredicted RBP22.97■■□□□ 1.27
CIRBP-238ENST00000592412 PPIL2Q13356 520 aa22.97■■□□□ 1.27
CIRBP-238ENST00000592412 PUM3Q15397 648 aaKnown RBP22.97■■□□□ 1.27
CIRBP-238ENST00000592412 HHIPL2Q6UWX4 724 aa22.97■■□□□ 1.27
CIRBP-238ENST00000592412 TMEM106CQ9BVX2 250 aa22.97■■□□□ 1.27
CIRBP-238ENST00000592412 ZCCHC17Q9NP64 241 aaKnown RBP22.97■■□□□ 1.27
CIRBP-238ENST00000592412 CTGFP29279 349 aa22.96■■□□□ 1.27
CIRBP-238ENST00000592412 INPP5BP32019 993 aa22.96■■□□□ 1.27
CIRBP-238ENST00000592412 SNAPC2Q13487 334 aa22.96■■□□□ 1.27
CIRBP-238ENST00000592412 ARHGEF6Q15052 776 aa22.96■■□□□ 1.27
CIRBP-238ENST00000592412 SH3TC2Q8TF17 1288 aa22.96■■□□□ 1.27
CIRBP-238ENST00000592412 TMOD2Q9NZR1 351 aa22.96■■□□□ 1.27
CIRBP-238ENST00000592412 MAST3O60307 1309 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms