RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TAS1R3Q7RTX0 852 aa10.4□□□□□ -0.74
VMP1-213ENST00000591877 ANKRD24Q8TF21 1146 aa10.4□□□□□ -0.74
VMP1-213ENST00000591877 IP6K1Q92551 441 aa10.4□□□□□ -0.74
VMP1-213ENST00000591877 CXXC1Q9P0U4 656 aaPredicted RBP10.4□□□□□ -0.74
VMP1-213ENST00000591877 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.74
VMP1-213ENST00000591877 DYRK1BQ9Y463 629 aa10.4□□□□□ -0.74
VMP1-213ENST00000591877 BCL9O00512 1426 aa10.4□□□□□ -0.75
VMP1-213ENST00000591877 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 MAP3K19Q56UN5 1328 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 M0R2N6 131 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 POU4F2Q12837 409 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 R3HDM1Q15032 1099 aaKnown RBP10.39□□□□□ -0.75
VMP1-213ENST00000591877 OCLNQ16625 522 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 DNAJC14Q6Y2X3 702 aaPredicted RBP10.39□□□□□ -0.75
VMP1-213ENST00000591877 COG3Q96JB2 828 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 LRRC4BQ9NT99 713 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 NLRP2Q9NX02 1062 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 NSFL1CQ9UNZ2 370 aaKnown RBP10.39□□□□□ -0.75
VMP1-213ENST00000591877 PCDHGA11Q9Y5H2 935 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 TNS2Q63HR2 1409 aa10.39□□□□□ -0.75
VMP1-213ENST00000591877 KRTAP9-6A0A140TA67 174 aa10.38□□□□□ -0.75
VMP1-213ENST00000591877 RBM47A0AV96 593 aaKnown RBP10.38□□□□□ -0.75
VMP1-213ENST00000591877 EXOC5O00471 708 aa10.38□□□□□ -0.75
VMP1-213ENST00000591877 COL8A1P27658 744 aa10.38□□□□□ -0.75
VMP1-213ENST00000591877 HOXC9P31274 260 aa10.38□□□□□ -0.75
VMP1-213ENST00000591877 TPCN2Q8NHX9 752 aa10.38□□□□□ -0.75
VMP1-213ENST00000591877 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
VMP1-213ENST00000591877 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
VMP1-213ENST00000591877 NHSQ6T4R5 1651 aa10.38□□□□□ -0.75
VMP1-213ENST00000591877 SHISA8B8ZZ34 492 aa10.37□□□□□ -0.75
VMP1-213ENST00000591877 OXCT2Q9BYC2 517 aaPredicted RBP10.37□□□□□ -0.75
VMP1-213ENST00000591877 PLSCR1O15162 318 aa10.36□□□□□ -0.75
VMP1-213ENST00000591877 IL2RBP14784 551 aa10.36□□□□□ -0.75
VMP1-213ENST00000591877 SERPINB4P48594 390 aa10.36□□□□□ -0.75
VMP1-213ENST00000591877 RRS1Q15050 365 aaKnown RBP10.36□□□□□ -0.75
VMP1-213ENST00000591877 LTV1Q96GA3 475 aaPredicted RBP10.36□□□□□ -0.75
VMP1-213ENST00000591877 RRAGCQ9HB90 399 aa10.36□□□□□ -0.75
VMP1-213ENST00000591877 MKL2Q9ULH7 1088 aa10.36□□□□□ -0.75
VMP1-213ENST00000591877 PCDHB11Q9Y5F2 797 aa10.36□□□□□ -0.75
VMP1-213ENST00000591877 BTAF1O14981 1849 aa10.35□□□□□ -0.75
VMP1-213ENST00000591877 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
VMP1-213ENST00000591877 NSD3Q9BZ95 1437 aa10.35□□□□□ -0.75
VMP1-213ENST00000591877 KCNQ2O43526 872 aa10.35□□□□□ -0.75
VMP1-213ENST00000591877 AMPHP49418 695 aa10.35□□□□□ -0.75
VMP1-213ENST00000591877 C1orf229Q6ZS94 237 aaPredicted RBP10.35□□□□□ -0.75
VMP1-213ENST00000591877 KAT6BQ8WYB5 2073 aa10.35□□□□□ -0.75
VMP1-213ENST00000591877 ANKRD26Q9UPS8 1709 aa10.34□□□□□ -0.75
VMP1-213ENST00000591877 A0A1W2PRU2 124 aa10.34□□□□□ -0.75
VMP1-213ENST00000591877 PRMT3O60678 531 aa10.34□□□□□ -0.75
VMP1-213ENST00000591877 MYCP01106 439 aaPredicted RBP10.34□□□□□ -0.75
VMP1-213ENST00000591877 HSPA5P11021 654 aaKnown RBP10.34□□□□□ -0.75
VMP1-213ENST00000591877 GPC1P35052 558 aa10.34□□□□□ -0.75
VMP1-213ENST00000591877 SLC27A3Q5K4L6 730 aa10.34□□□□□ -0.75
VMP1-213ENST00000591877 NUCKS1Q9H1E3 243 aaKnown RBP10.34□□□□□ -0.75
VMP1-213ENST00000591877 RTL1A6NKG5 1358 aa10.34□□□□□ -0.75
VMP1-213ENST00000591877 NBPF6Q5VWK0 638 aa10.33□□□□□ -0.76
VMP1-213ENST00000591877 ACSBG1Q96GR2 724 aa10.33□□□□□ -0.76
VMP1-213ENST00000591877 NBPF4Q96M43 638 aa10.33□□□□□ -0.76
VMP1-213ENST00000591877 CASZ1Q86V15 1759 aa10.33□□□□□ -0.76
VMP1-213ENST00000591877 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
VMP1-213ENST00000591877 MEGF6O75095 1541 aa10.33□□□□□ -0.76
VMP1-213ENST00000591877 SFI1A8K8P3 1242 aa10.32□□□□□ -0.76
VMP1-213ENST00000591877 WEE1P30291 646 aa10.32□□□□□ -0.76
VMP1-213ENST00000591877 MAP2K3P46734 347 aa10.32□□□□□ -0.76
VMP1-213ENST00000591877 GRIN2CQ14957 1233 aa10.32□□□□□ -0.76
VMP1-213ENST00000591877 HSP90AB2PQ58FF8 381 aa10.32□□□□□ -0.76
VMP1-213ENST00000591877 INSRP06213 1382 aa10.31□□□□□ -0.76
VMP1-213ENST00000591877 TXNRD1Q16881 649 aa10.31□□□□□ -0.76
VMP1-213ENST00000591877 NBPF10Q6P3W6 841 aaKnown RBP10.31□□□□□ -0.76
VMP1-213ENST00000591877 NBPF15Q8N660 670 aa10.31□□□□□ -0.76
VMP1-213ENST00000591877 USHBP1Q8N6Y0 703 aa10.31□□□□□ -0.76
VMP1-213ENST00000591877 COL26A1Q96A83 441 aa10.31□□□□□ -0.76
VMP1-213ENST00000591877 FLT4P35916 1363 aa10.3□□□□□ -0.76
VMP1-213ENST00000591877 PAPPAQ13219 1627 aa10.3□□□□□ -0.76
VMP1-213ENST00000591877 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
VMP1-213ENST00000591877 ICMTO60725 284 aa10.3□□□□□ -0.76
VMP1-213ENST00000591877 PTCD1O75127 700 aaKnown RBP10.3□□□□□ -0.76
VMP1-213ENST00000591877 DDX54Q8TDD1 881 aaKnown RBP10.3□□□□□ -0.76
VMP1-213ENST00000591877 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
VMP1-213ENST00000591877 PRIMPOLQ96LW4 560 aa10.3□□□□□ -0.76
VMP1-213ENST00000591877 NLRP3Q96P20 1036 aa10.3□□□□□ -0.76
VMP1-213ENST00000591877 SUV39H2Q9H5I1 410 aa10.3□□□□□ -0.76
VMP1-213ENST00000591877 ALYREFQ86V81 257 aaKnown RBP10.29□□□□□ -0.76
VMP1-213ENST00000591877 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
VMP1-213ENST00000591877 POLR3GLQ9BT43 218 aa10.29□□□□□ -0.76
VMP1-213ENST00000591877 GRIP2Q9C0E4 1043 aa10.29□□□□□ -0.76
VMP1-213ENST00000591877 PDGFDQ9GZP0 370 aaPredicted RBP10.29□□□□□ -0.76
VMP1-213ENST00000591877 TIMMDC1Q9NPL8 285 aa10.29□□□□□ -0.76
VMP1-213ENST00000591877 BIN2Q9UBW5 565 aaPredicted RBP10.29□□□□□ -0.76
VMP1-213ENST00000591877 LY75O60449 1722 aa10.28□□□□□ -0.76
VMP1-213ENST00000591877 PKD1L3Q7Z443 1732 aa10.28□□□□□ -0.76
VMP1-213ENST00000591877 C1QTNF9BB2RNN3 333 aa10.28□□□□□ -0.76
VMP1-213ENST00000591877 ZCRB1Q8TBF4 217 aaKnown RBP10.28□□□□□ -0.76
VMP1-213ENST00000591877 HINFPQ9BQA5 517 aa10.28□□□□□ -0.76
VMP1-213ENST00000591877 CGNL1Q0VF96 1302 aa10.28□□□□□ -0.76
VMP1-213ENST00000591877 NSD2O96028 1365 aa10.27□□□□□ -0.76
VMP1-213ENST00000591877 NCAPD2Q15021 1401 aa10.27□□□□□ -0.77
VMP1-213ENST00000591877 SMG6Q86US8 1419 aaKnown RBP10.27□□□□□ -0.77
VMP1-213ENST00000591877 C21orf2O43822 256 aa10.27□□□□□ -0.77
VMP1-213ENST00000591877 F11P03951 625 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms