RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 NAPBQ9H115 298 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
VPS25-206ENST00000591584 ELP1O95163 1332 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
VPS25-206ENST00000591584 PLSCR1O15162 318 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 PRC1O43663 620 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 BBOX1O75936 387 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 PDIA3P30101 505 aaKnown RBP12.22□□□□□ -0.45
VPS25-206ENST00000591584 SCRN1Q12765 414 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 FAM182BQ5T319 152 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 C3orf67Q6ZVT6 689 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
VPS25-206ENST00000591584 RBM17Q96I25 401 aaKnown RBP12.22□□□□□ -0.45
VPS25-206ENST00000591584 VPS37CA5D8V6 355 aaPredicted RBP12.21□□□□□ -0.45
VPS25-206ENST00000591584 H3BQV1 296 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 MBD4O95243 580 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 CYP7A1P22680 504 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 APOBRQ0VD83 1088 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 STK3Q13188 491 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 IFFO2Q5TF58 517 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 FOXD4L5Q5VV16 416 aaPredicted RBP12.21□□□□□ -0.45
VPS25-206ENST00000591584 CPLX2Q6PUV4 134 aaKnown RBP12.21□□□□□ -0.45
VPS25-206ENST00000591584 CERS3Q8IU89 383 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 FOXD4L4Q8WXT5 416 aaPredicted RBP12.21□□□□□ -0.45
VPS25-206ENST00000591584 GRPEL1Q9HAV7 217 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 RAI14Q9P0K7 980 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.45
VPS25-206ENST00000591584 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.45
VPS25-206ENST00000591584 SBF2Q86WG5 1849 aa12.21□□□□□ -0.46
VPS25-206ENST00000591584 SALL1Q9NSC2 1324 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 MAGEB6P1A0A0J9YX57 407 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 CDKL5O76039 1030 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 SERPINB2P05120 415 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 GYS1P13807 737 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 ATP2B4P23634 1241 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 LIFRP42702 1097 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 GYG1P46976 350 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 RCAN1P53805 252 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 SART3Q15020 963 aaKnown RBP12.2□□□□□ -0.46
VPS25-206ENST00000591584 PPP2R5BQ15173 497 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 AKNAD1Q5T1N1 836 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
VPS25-206ENST00000591584 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
VPS25-206ENST00000591584 WDR66Q8TBY9 1149 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 GPT2Q8TD30 523 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 STAG1Q8WVM7 1258 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 RPGRQ92834 1020 aaKnown RBP12.2□□□□□ -0.46
VPS25-206ENST00000591584 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
VPS25-206ENST00000591584 MYH7P12883 1935 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 XDHP47989 1333 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 KLRG2A4D1S0 409 aaPredicted RBP12.19□□□□□ -0.46
VPS25-206ENST00000591584 SNAP23O00161 211 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 HOXA10P31260 410 aaPredicted RBP12.19□□□□□ -0.46
VPS25-206ENST00000591584 TDO2P48775 406 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 HAND2P61296 217 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 TXNRD1Q16881 649 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 ZSCAN23Q3MJ62 389 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 SYNE3Q6ZMZ3 975 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 SGMS1Q86VZ5 419 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 ANP32BQ92688 251 aaKnown RBP12.19□□□□□ -0.46
VPS25-206ENST00000591584 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 BRIP1Q9BX63 1249 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 ARMT1Q9H993 441 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 ABCF2Q9UG63 623 aa12.19□□□□□ -0.46
VPS25-206ENST00000591584 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
VPS25-206ENST00000591584 SH2B2O14492 632 aaPredicted RBP12.18□□□□□ -0.46
VPS25-206ENST00000591584 CPLX1O14810 134 aa12.18□□□□□ -0.46
VPS25-206ENST00000591584 TRIM37O94972 964 aa12.18□□□□□ -0.46
VPS25-206ENST00000591584 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
VPS25-206ENST00000591584 GSTO1P78417 241 aa12.18□□□□□ -0.46
VPS25-206ENST00000591584 COL9A3Q14050 684 aaPredicted RBP12.18□□□□□ -0.46
VPS25-206ENST00000591584 LRSAM1Q6UWE0 723 aa12.18□□□□□ -0.46
VPS25-206ENST00000591584 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
VPS25-206ENST00000591584 ZNF396Q96N95 335 aaPredicted RBP12.18□□□□□ -0.46
VPS25-206ENST00000591584 ANKIB1Q9P2G1 1089 aa12.18□□□□□ -0.46
VPS25-206ENST00000591584 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
VPS25-206ENST00000591584 DOCK2Q92608 1830 aa12.17□□□□□ -0.46
VPS25-206ENST00000591584 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
VPS25-206ENST00000591584 ERICH2A1L162 156 aa12.17□□□□□ -0.46
VPS25-206ENST00000591584 LDHCP07864 332 aa12.17□□□□□ -0.46
VPS25-206ENST00000591584 SLC3A2P08195 630 aaKnown RBP12.17□□□□□ -0.46
VPS25-206ENST00000591584 ANTXR2P58335 489 aa12.17□□□□□ -0.46
VPS25-206ENST00000591584 DNM1Q05193 864 aaKnown RBP12.17□□□□□ -0.46
VPS25-206ENST00000591584 LCORLQ8N3X6 602 aa12.17□□□□□ -0.46
VPS25-206ENST00000591584 NSUN4Q96CB9 384 aaKnown RBP12.17□□□□□ -0.46
VPS25-206ENST00000591584 ATP8A2Q9NTI2 1148 aa12.17□□□□□ -0.46
VPS25-206ENST00000591584 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
VPS25-206ENST00000591584 CCDC196A0A1B0GTZ2 297 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 GOLGA6L4A6NEF3 574 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms