RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 IRF6O14896 467 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 MAP2K5Q13163 448 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 PTGDRQ13258 359 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 HIC1Q14526 733 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 DACT2Q5SW24 774 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 ARMC9Q7Z3E5 817 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 UBE3BQ7Z3V4 1068 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 RASAL3Q86YV0 1011 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 APOBEC3FQ8IUX4 373 aaKnown RBP12□□□□□ -0.49
BRCA1-226ENST00000591534 TSPYL6Q8N831 410 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 ASTN2O75129 1339 aaPredicted RBP12□□□□□ -0.49
BRCA1-226ENST00000591534 IL16Q14005 1332 aa12□□□□□ -0.49
BRCA1-226ENST00000591534 ITGA6P23229 1130 aa11.99□□□□□ -0.49
BRCA1-226ENST00000591534 SREBF2Q12772 1141 aa11.99□□□□□ -0.49
BRCA1-226ENST00000591534 FKBP5Q13451 457 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-226ENST00000591534 GCKRQ14397 625 aa11.99□□□□□ -0.49
BRCA1-226ENST00000591534 CWF19L2Q2TBE0 894 aaKnown RBP11.99□□□□□ -0.49
BRCA1-226ENST00000591534 IL27Q8NEV9 243 aa11.99□□□□□ -0.49
BRCA1-226ENST00000591534 TSR2Q969E8 191 aaKnown RBP11.99□□□□□ -0.49
BRCA1-226ENST00000591534 PLA2G12BQ9BX93 195 aa11.99□□□□□ -0.49
BRCA1-226ENST00000591534 KDM4CQ9H3R0 1056 aa11.99□□□□□ -0.49
BRCA1-226ENST00000591534 ZNF804BA4D1E1 1349 aa11.99□□□□□ -0.49
BRCA1-226ENST00000591534 TAF1P21675 1872 aa11.99□□□□□ -0.49
BRCA1-226ENST00000591534 ANKRD18BA2A2Z9 1011 aa11.98□□□□□ -0.49
BRCA1-226ENST00000591534 CCER2I3L3R5 266 aa11.98□□□□□ -0.49
BRCA1-226ENST00000591534 WNT10BO00744 389 aa11.98□□□□□ -0.49
BRCA1-226ENST00000591534 FLIIQ13045 1269 aa11.98□□□□□ -0.49
BRCA1-226ENST00000591534 NBPF9Q3BBW0 867 aa11.98□□□□□ -0.49
BRCA1-226ENST00000591534 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
BRCA1-226ENST00000591534 LINS1Q8NG48 757 aa11.98□□□□□ -0.49
BRCA1-226ENST00000591534 UBE2Q2LH0YL09 131 aa11.97□□□□□ -0.49
BRCA1-226ENST00000591534 MAP3K7O43318 606 aa11.97□□□□□ -0.49
BRCA1-226ENST00000591534 MYO1BO43795 1136 aa11.97□□□□□ -0.49
BRCA1-226ENST00000591534 TSR1Q2NL82 804 aaKnown RBP11.97□□□□□ -0.49
BRCA1-226ENST00000591534 DNAAF4Q8WXU2 420 aa11.97□□□□□ -0.49
BRCA1-226ENST00000591534 MRS2Q9HD23 443 aa11.97□□□□□ -0.49
BRCA1-226ENST00000591534 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-226ENST00000591534 ALDH1A1P00352 501 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 CSF1RP07333 972 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 TM4SF4P48230 202 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 INHBEP58166 350 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 GTF2IP78347 998 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
BRCA1-226ENST00000591534 DLGAP5Q15398 846 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 NOM1Q5C9Z4 860 aaKnown RBP11.96□□□□□ -0.49
BRCA1-226ENST00000591534 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 EPAS1Q99814 870 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 PPP2R3BQ9Y5P8 575 aa11.96□□□□□ -0.49
BRCA1-226ENST00000591534 PAPPA2Q9BXP8 1791 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 UNCXA6NJT0 531 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 PPP1R12BO60237 982 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-226ENST00000591534 NUDT7P0C024 238 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 CHRNDQ07001 517 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 SUPT20HL1Q3ZLR7 823 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 TAF7LQ5H9L4 462 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 ZNF804AQ7Z570 1209 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 KIAA0825Q8IV33 1275 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 WDR63Q8IWG1 891 aa11.95□□□□□ -0.5
BRCA1-226ENST00000591534 COL4A1P02462 1669 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 SASH1O94885 1247 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-226ENST00000591534 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 C15orf52Q6ZUT6 534 aaKnown RBP11.94□□□□□ -0.5
BRCA1-226ENST00000591534 MOB2Q70IA6 237 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 G2E3Q7L622 706 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 SLC10A4Q96EP9 437 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 MXD3Q9BW11 206 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 CD209Q9NNX6 404 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
BRCA1-226ENST00000591534 COL1A1P02452 1464 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-226ENST00000591534 CASP8AP2Q9UKL3 1982 aa11.93□□□□□ -0.5
BRCA1-226ENST00000591534 MANSC4A6NHS7 340 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-226ENST00000591534 WTIPA6NIX2 430 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-226ENST00000591534 TBC1D8O95759 1140 aa11.93□□□□□ -0.5
BRCA1-226ENST00000591534 FKBP1AP62942 108 aaKnown RBP11.93□□□□□ -0.5
BRCA1-226ENST00000591534 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
BRCA1-226ENST00000591534 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
BRCA1-226ENST00000591534 TXNRD3Q86VQ6 643 aa11.93□□□□□ -0.5
BRCA1-226ENST00000591534 MTMR14Q8NCE2 650 aa11.93□□□□□ -0.5
BRCA1-226ENST00000591534 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-226ENST00000591534 DEFB129Q9H1M3 183 aa11.93□□□□□ -0.5
BRCA1-226ENST00000591534 ANGEL1Q9UNK9 670 aaKnown RBP11.93□□□□□ -0.5
BRCA1-226ENST00000591534 SCAF8Q9UPN6 1271 aaKnown RBP11.93□□□□□ -0.5
BRCA1-226ENST00000591534 SCN9AQ15858 1988 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 FANCIQ9NVI1 1328 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 GPR25O00155 361 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 FKTNO75072 461 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 CASP7P55210 303 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 SOX10P56693 466 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
BRCA1-226ENST00000591534 LDLRAD1Q5T700 205 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 CFHR5Q9BXR6 569 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
BRCA1-226ENST00000591534 SALL2Q9Y467 1007 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-226ENST00000591534 VAMP4O75379 141 aa11.91□□□□□ -0.5
BRCA1-226ENST00000591534 ZBTB48P10074 688 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-226ENST00000591534 IL1R1P14778 569 aa11.91□□□□□ -0.5
BRCA1-226ENST00000591534 IREB2P48200 963 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms